EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000039478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 456 bases
Position: chr13:31394604-31395059
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037165	Ribosomal_L1	PF00687.21	3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000045216	-	456	-	ENSSSCP00000037165	151 (aa)	-	A0A286ZZV2

Gene Model

Click here to download ENSSSCG00000039478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000039478	-	97	81.081	ENSSSCG00000001543	RPL10A	84	81.081
ENSSSCG00000039478	-	61	67.021	ENSSSCG00000033380	-	64	70.000
ENSSSCG00000039478	-	56	73.256	ENSSSCG00000040585	-	69	73.256
ENSSSCG00000039478	-	87	60.150	ENSSSCG00000015831	-	75	66.279
ENSSSCG00000039478	-	100	76.159	ENSSSCG00000011206	-	73	76.159
ENSSSCG00000039478	-	61	67.021	ENSSSCG00000036088	-	64	70.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000039478	-	100	56.863	ENSANAG00000038119	-	90	59.477	Aotus_nancymaae
ENSSSCG00000039478	-	96	72.789	ENSCAFG00000018679	-	70	77.551	Canis_familiaris
ENSSSCG00000039478	-	99	61.184	ENSFCAG00000030405	-	63	61.745	Felis_catus
ENSSSCG00000039478	-	78	72.034	ENSFCAG00000041512	-	72	70.370	Felis_catus
ENSSSCG00000039478	-	99	67.785	ENSGGOG00000027388	-	67	64.430	Gorilla_gorilla
ENSSSCG00000039478	-	85	62.791	ENSOARG00000020392	-	50	59.434	Ovis_aries
ENSSSCG00000039478	-	97	58.784	ENSPEMG00000011160	-	63	61.486	Peromyscus_maniculatus_bairdii
ENSSSCG00000039478	-	100	71.895	ENSSBOG00000029918	-	90	71.895	Saimiri_boliviensis_boliviensis