EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000039498 (Gene tree)
Gene ID
-
Gene Symbol
RBFOX3
Alias
FOX-3|HRNBP3|NeuN
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
427636 bases
Position
chr12:2709983-3137618
Accession
110256156
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000033058Fox-1_CPF12414.81.1e-4511
ENSSSCP00000054125Fox-1_CPF12414.89.9e-4211
ENSSSCP00000033058RRM_1PF00076.221.5e-1811
ENSSSCP00000054125RRM_1PF00076.221.5e-1811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000044411RBFOX3-2024359-ENSSSCP00000033058328 (aa)-A0A286ZN97
ENSSSCT00000046208RBFOX3-2013418XM_021068070ENSSSCP00000054125330 (aa)XP_020923729A0A287BC80
Gene Model
Click here to download ENSSSCG00000039498's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039498's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000039498RBFOX39761.318ENSSSCG00000007917RBFOX17970.819
ENSSSCG00000039498RBFOX310055.764ENSSSCG00000000152RBFOX27967.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000039498RBFOX39697.152ENSG00000167281RBFOX39998.667Homo_sapiens
ENSSSCG00000039498RBFOX37990.196ENSAPOG00000015658-8073.852Acanthochromis_polyacanthus
ENSSSCG00000039498RBFOX310071.687ENSAPOG00000021630rbfox3b7481.250Acanthochromis_polyacanthus
ENSSSCG00000039498RBFOX38489.153ENSAMEG00000014170RBFOX37586.780Ailuropoda_melanoleuca
ENSSSCG00000039498RBFOX37882.353ENSACIG00000010817rbfox3b7790.625Amphilophus_citrinellus
ENSSSCG00000039498RBFOX39161.250ENSACIG00000003768-6575.107Amphilophus_citrinellus
ENSSSCG00000039498RBFOX37988.462ENSAOCG00000010786-7280.435Amphiprion_ocellaris
ENSSSCG00000039498RBFOX39670.755ENSAOCG00000012358rbfox3b7481.250Amphiprion_ocellaris
ENSSSCG00000039498RBFOX37791.667ENSAPEG00000015891-6493.103Amphiprion_percula
ENSSSCG00000039498RBFOX37579.412ENSAPEG00000019081rbfox3b6690.625Amphiprion_percula
ENSSSCG00000039498RBFOX39768.421ENSATEG00000023101-8380.586Anabas_testudineus
ENSSSCG00000039498RBFOX39771.118ENSATEG00000019945rbfox3b8773.267Anabas_testudineus
ENSSSCG00000039498RBFOX39677.287ENSACAG00000016093RBFOX37588.148Anolis_carolinensis
ENSSSCG00000039498RBFOX39686.076ENSANAG00000023457RBFOX38692.937Aotus_nancymaae
ENSSSCG00000039498RBFOX39671.787ENSACLG00000025552-7484.191Astatotilapia_calliptera
ENSSSCG00000039498RBFOX310072.289ENSACLG00000020011rbfox3b8681.181Astatotilapia_calliptera
ENSSSCG00000039498RBFOX39774.845ENSAMXG00000037246rbfox3a8287.868Astyanax_mexicanus
ENSSSCG00000039498RBFOX39668.125ENSAMXG00000042841rbfox3b7776.103Astyanax_mexicanus
ENSSSCG00000039498RBFOX39687.975ENSBTAG00000006280RBFOX38787.975Bos_taurus
ENSSSCG00000039498RBFOX39695.886ENSCJAG00000009563RBFOX38895.886Callithrix_jacchus
ENSSSCG00000039498RBFOX37895.312ENSCAFG00000005547RBFOX38697.934Canis_familiaris
ENSSSCG00000039498RBFOX310097.879ENSCAFG00020008126RBFOX38897.879Canis_lupus_dingo
ENSSSCG00000039498RBFOX310097.576ENSCHIG00000009124RBFOX38897.576Capra_hircus
ENSSSCG00000039498RBFOX39697.152ENSTSYG00000029617RBFOX38897.152Carlito_syrichta
ENSSSCG00000039498RBFOX310096.084ENSCPOG00000021703RBFOX38894.880Cavia_porcellus
ENSSSCG00000039498RBFOX39686.076ENSCCAG00000028450RBFOX38692.937Cebus_capucinus
ENSSSCG00000039498RBFOX39691.139ENSCATG00000018349RBFOX38697.398Cercocebus_atys
ENSSSCG00000039498RBFOX310096.970ENSCLAG00000006449RBFOX38896.970Chinchilla_lanigera
ENSSSCG00000039498RBFOX38297.398ENSCSAG00000002355RBFOX38697.398Chlorocebus_sabaeus
ENSSSCG00000039498RBFOX310076.364ENSCPBG00000010904RBFOX38687.732Chrysemys_picta_bellii
ENSSSCG00000039498RBFOX310097.576ENSCANG00000043120RBFOX38897.576Colobus_angolensis_palliatus
ENSSSCG00000039498RBFOX310092.145ENSCGRG00001019476Rbfox38892.145Cricetulus_griseus_chok1gshd
ENSSSCG00000039498RBFOX310092.145ENSCGRG00000003268Rbfox38892.145Cricetulus_griseus_crigri
ENSSSCG00000039498RBFOX37890.000ENSCSEG00000015567RBFOX37380.072Cynoglossus_semilaevis
ENSSSCG00000039498RBFOX39958.434ENSCSEG00000020606RBFOX37968.015Cynoglossus_semilaevis
ENSSSCG00000039498RBFOX39670.755ENSCVAG00000006882rbfox3b7381.250Cyprinodon_variegatus
ENSSSCG00000039498RBFOX310060.423ENSDARG00000074310rbfox3b9772.687Danio_rerio
ENSSSCG00000039498RBFOX39673.981ENSDARG00000010083rbfox3a8386.765Danio_rerio
ENSSSCG00000039498RBFOX39486.538ENSDNOG00000039391RBFOX38384.295Dasypus_novemcinctus
ENSSSCG00000039498RBFOX310083.030ENSDORG00000005352Rbfox38880.606Dipodomys_ordii
ENSSSCG00000039498RBFOX310063.112ENSEBUG00000002129RBFOX38171.821Eptatretus_burgeri
ENSSSCG00000039498RBFOX38156.506ENSEBUG00000013559RBFOX36168.018Eptatretus_burgeri
ENSSSCG00000039498RBFOX38297.778ENSEASG00005005059RBFOX38697.778Equus_asinus_asinus
ENSSSCG00000039498RBFOX38497.464ENSECAG00000023811RBFOX38697.778Equus_caballus
ENSSSCG00000039498RBFOX310081.212ENSEEUG00000013974RBFOX38881.212Erinaceus_europaeus
ENSSSCG00000039498RBFOX310071.471ENSELUG00000017963rbfox3b8569.118Esox_lucius
ENSSSCG00000039498RBFOX310080.303ENSFCAG00000002555RBFOX38693.309Felis_catus
ENSSSCG00000039498RBFOX310064.674ENSFALG00000012288RBFOX37473.422Ficedula_albicollis
ENSSSCG00000039498RBFOX310091.265ENSFDAG00000007489RBFOX38890.060Fukomys_damarensis
ENSSSCG00000039498RBFOX39661.321ENSFHEG00000008550rbfox3b8569.853Fundulus_heteroclitus
ENSSSCG00000039498RBFOX39969.486ENSGMOG00000019304-9967.069Gadus_morhua
ENSSSCG00000039498RBFOX38393.727ENSGALG00000032889RBFOX37591.078Gallus_gallus
ENSSSCG00000039498RBFOX39669.497ENSGAFG00000005025rbfox3b7880.882Gambusia_affinis
ENSSSCG00000039498RBFOX310074.627ENSGACG00000002138-8974.627Gasterosteus_aculeatus
ENSSSCG00000039498RBFOX310076.667ENSGAGG00000020025RBFOX38688.104Gopherus_agassizii
ENSSSCG00000039498RBFOX310097.576ENSGGOG00000012546RBFOX38897.576Gorilla_gorilla
ENSSSCG00000039498RBFOX310072.072ENSHBUG00000023098-7982.671Haplochromis_burtoni
ENSSSCG00000039498RBFOX310072.289ENSHBUG00000018099rbfox3b7381.181Haplochromis_burtoni
ENSSSCG00000039498RBFOX310095.509ENSHGLG00000008679RBFOX38895.509Heterocephalus_glaber_female
ENSSSCG00000039498RBFOX310091.018ENSHGLG00100014739RBFOX38889.222Heterocephalus_glaber_male
ENSSSCG00000039498RBFOX39766.149ENSHCOG00000007444RBFOX37475.958Hippocampus_comes
ENSSSCG00000039498RBFOX37387.234ENSHCOG00000001863RBFOX37281.818Hippocampus_comes
ENSSSCG00000039498RBFOX310074.174ENSIPUG00000012010rbfox3a8286.029Ictalurus_punctatus
ENSSSCG00000039498RBFOX39664.151ENSIPUG00000021966rbfox3b7779.327Ictalurus_punctatus
ENSSSCG00000039498RBFOX37897.297ENSSTOG00000026817RBFOX38397.297Ictidomys_tridecemlineatus
ENSSSCG00000039498RBFOX310095.758ENSJJAG00000014167Rbfox38893.636Jaculus_jaculus
ENSSSCG00000039498RBFOX39670.755ENSKMAG00000006726rbfox3b7481.250Kryptolebias_marmoratus
ENSSSCG00000039498RBFOX310071.687ENSLBEG00000004030rbfox3b7787.500Labrus_bergylta
ENSSSCG00000039498RBFOX39673.354ENSLBEG00000022508-7486.029Labrus_bergylta
ENSSSCG00000039498RBFOX310062.924ENSLACG00000018409-7677.517Latimeria_chalumnae
ENSSSCG00000039498RBFOX39675.549ENSLOCG00000012267rbfox3a8288.603Lepisosteus_oculatus
ENSSSCG00000039498RBFOX310094.848ENSLAFG00000016623RBFOX38894.848Loxodonta_africana
ENSSSCG00000039498RBFOX39697.152ENSMFAG00000002247RBFOX38897.152Macaca_fascicularis
ENSSSCG00000039498RBFOX39687.658ENSMMUG00000023028RBFOX38697.398Macaca_mulatta
ENSSSCG00000039498RBFOX310091.212ENSMNEG00000041147RBFOX38697.026Macaca_nemestrina
ENSSSCG00000039498RBFOX39691.139ENSMLEG00000025686RBFOX38697.398Mandrillus_leucophaeus
ENSSSCG00000039498RBFOX37882.609ENSMAMG00000019810rbfox3b7690.625Mastacembelus_armatus
ENSSSCG00000039498RBFOX310066.959ENSMAMG00000020600-7777.256Mastacembelus_armatus
ENSSSCG00000039498RBFOX310072.289ENSMZEG00005000781rbfox3b7381.181Maylandia_zebra
ENSSSCG00000039498RBFOX37460.507ENSMZEG00005003055-5990.370Maylandia_zebra
ENSSSCG00000039498RBFOX35091.411ENSMGAG00000005600RBFOX36391.411Meleagris_gallopavo
ENSSSCG00000039498RBFOX310094.260ENSMAUG00000013543Rbfox38894.260Mesocricetus_auratus
ENSSSCG00000039498RBFOX310096.970ENSMICG00000014898RBFOX38996.970Microcebus_murinus
ENSSSCG00000039498RBFOX310094.545ENSMOCG00000015373Rbfox38894.545Microtus_ochrogaster
ENSSSCG00000039498RBFOX39668.421ENSMMOG00000020193rbfox3b7379.927Mola_mola
ENSSSCG00000039498RBFOX38293.309ENSMODG00000002089RBFOX37590.706Monodelphis_domestica
ENSSSCG00000039498RBFOX310073.574ENSMALG00000018270-8379.562Monopterus_albus
ENSSSCG00000039498RBFOX36991.189ENSMALG00000020407rbfox3b7479.779Monopterus_albus
ENSSSCG00000039498RBFOX310095.152MGP_CAROLIEiJ_G0017487Rbfox310096.552Mus_caroli
ENSSSCG00000039498RBFOX310094.848ENSMUSG00000025576Rbfox310096.552Mus_musculus
ENSSSCG00000039498RBFOX310093.051MGP_PahariEiJ_G0018614Rbfox310097.241Mus_pahari
ENSSSCG00000039498RBFOX310095.455MGP_SPRETEiJ_G0018331Rbfox310096.552Mus_spretus
ENSSSCG00000039498RBFOX310074.932ENSMPUG00000012319RBFOX38181.994Mustela_putorius_furo
ENSSSCG00000039498RBFOX310095.758ENSNGAG00000018006Rbfox38895.758Nannospalax_galili
ENSSSCG00000039498RBFOX37390.909ENSNBRG00000022885-7090.625Neolamprologus_brichardi
ENSSSCG00000039498RBFOX39670.126ENSNBRG00000010102rbfox3b6690.000Neolamprologus_brichardi
ENSSSCG00000039498RBFOX35496.429ENSNLEG00000000153-6996.429Nomascus_leucogenys
ENSSSCG00000039498RBFOX37991.667ENSMEUG00000004218-6796.552Notamacropus_eugenii
ENSSSCG00000039498RBFOX36394.776ENSOPRG00000016279-6394.776Ochotona_princeps
ENSSSCG00000039498RBFOX310096.970ENSODEG00000009433RBFOX38896.970Octodon_degus
ENSSSCG00000039498RBFOX310077.313ENSONIG00000009549rbfox3b8875.224Oreochromis_niloticus
ENSSSCG00000039498RBFOX39672.414ENSONIG00000007282-7984.926Oreochromis_niloticus
ENSSSCG00000039498RBFOX38781.818ENSOCUG00000014217RBFOX37879.720Oryctolagus_cuniculus
ENSSSCG00000039498RBFOX310072.372ENSORLG00000000905rbfox3b5880.952Oryzias_latipes
ENSSSCG00000039498RBFOX310072.372ENSORLG00020018030rbfox3b7480.657Oryzias_latipes_hni
ENSSSCG00000039498RBFOX310068.768ENSORLG00015009200rbfox3b7587.500Oryzias_latipes_hsok
ENSSSCG00000039498RBFOX35977.103ENSOMEG00000014677rbfox3b6176.623Oryzias_melastigma
ENSSSCG00000039498RBFOX38494.545ENSOGAG00000029595RBFOX37392.000Otolemur_garnettii
ENSSSCG00000039498RBFOX37083.544ENSOARG00000002908RBFOX37272.500Ovis_aries
ENSSSCG00000039498RBFOX38896.897ENSPPAG00000025383RBFOX38497.107Pan_paniscus
ENSSSCG00000039498RBFOX39693.354ENSPPRG00000007819RBFOX38891.139Panthera_pardus
ENSSSCG00000039498RBFOX310097.576ENSPTRG00000009727RBFOX38897.576Pan_troglodytes
ENSSSCG00000039498RBFOX39690.852ENSPANG00000019837RBFOX38697.398Papio_anubis
ENSSSCG00000039498RBFOX38567.972ENSPKIG00000022633-7567.647Paramormyrops_kingsleyae
ENSSSCG00000039498RBFOX310075.375ENSPKIG00000010299rbfox3a6586.283Paramormyrops_kingsleyae
ENSSSCG00000039498RBFOX38169.742ENSPMGG00000008000rbfox3b6983.929Periophthalmus_magnuspinnatus
ENSSSCG00000039498RBFOX310094.848ENSPEMG00000010500Rbfox38894.848Peromyscus_maniculatus_bairdii
ENSSSCG00000039498RBFOX37261.753ENSPMAG00000008689rbfox3b9575.897Petromyzon_marinus
ENSSSCG00000039498RBFOX39990.881ENSPCIG00000005766RBFOX38891.456Phascolarctos_cinereus
ENSSSCG00000039498RBFOX310071.687ENSPFOG00000018294rbfox3b7280.144Poecilia_formosa
ENSSSCG00000039498RBFOX37386.339ENSPLAG00000000481rbfox3b7193.023Poecilia_latipinna
ENSSSCG00000039498RBFOX39661.321ENSPMEG00000022997rbfox3b8570.221Poecilia_mexicana
ENSSSCG00000039498RBFOX39770.807ENSPREG00000012886rbfox3b7880.882Poecilia_reticulata
ENSSSCG00000039498RBFOX310069.697ENSPPYG00000008704RBFOX37089.669Pongo_abelii
ENSSSCG00000039498RBFOX39693.038ENSPCAG00000001401RBFOX38893.038Procavia_capensis
ENSSSCG00000039498RBFOX39697.152ENSPCOG00000012689RBFOX38896.835Propithecus_coquereli
ENSSSCG00000039498RBFOX39684.858ENSPVAG00000015243RBFOX38884.858Pteropus_vampyrus
ENSSSCG00000039498RBFOX36890.000ENSPNYG00000010414rbfox3b6690.000Pundamilia_nyererei
ENSSSCG00000039498RBFOX37388.235ENSPNYG00000009079-6787.879Pundamilia_nyererei
ENSSSCG00000039498RBFOX37582.692ENSPNAG00000018173rbfox3b6784.848Pygocentrus_nattereri
ENSSSCG00000039498RBFOX310075.375ENSPNAG00000002889rbfox3a7487.500Pygocentrus_nattereri
ENSSSCG00000039498RBFOX310093.051ENSRNOG00000003386Rbfox38893.051Rattus_norvegicus
ENSSSCG00000039498RBFOX39690.852ENSRBIG00000040449RBFOX37597.398Rhinopithecus_bieti
ENSSSCG00000039498RBFOX39690.852ENSRROG00000000766RBFOX38697.398Rhinopithecus_roxellana
ENSSSCG00000039498RBFOX310096.364ENSSBOG00000031591RBFOX38896.364Saimiri_boliviensis_boliviensis
ENSSSCG00000039498RBFOX39276.716ENSSHAG00000016076RBFOX38579.182Sarcophilus_harrisii
ENSSSCG00000039498RBFOX39262.623ENSSFOG00015004716RBFOX37374.806Scleropages_formosus
ENSSSCG00000039498RBFOX310076.276ENSSFOG00015023260rbfox3a7488.603Scleropages_formosus
ENSSSCG00000039498RBFOX310068.481ENSSMAG00000012618rbfox3b6576.389Scophthalmus_maximus
ENSSSCG00000039498RBFOX39670.533ENSSMAG00000019052-8682.721Scophthalmus_maximus
ENSSSCG00000039498RBFOX39661.321ENSSDUG00000023183rbfox3b8569.853Seriola_dumerili
ENSSSCG00000039498RBFOX310065.192ENSSDUG00000015801-6690.625Seriola_dumerili
ENSSSCG00000039498RBFOX39670.755ENSSLDG00000000149rbfox3b7480.882Seriola_lalandi_dorsalis
ENSSSCG00000039498RBFOX37990.196ENSSLDG00000016098-7581.319Seriola_lalandi_dorsalis
ENSSSCG00000039498RBFOX38389.706ENSSPUG00000011733RBFOX38688.603Sphenodon_punctatus
ENSSSCG00000039498RBFOX38865.411ENSSPAG00000004898-6677.434Stegastes_partitus
ENSSSCG00000039498RBFOX37882.353ENSSPAG00000017571rbfox3b6490.625Stegastes_partitus
ENSSSCG00000039498RBFOX310067.155ENSTRUG00000004894rbfox3b7976.140Takifugu_rubripes
ENSSSCG00000039498RBFOX310060.358ENSTNIG00000011278rbfox3b7671.475Tetraodon_nigroviridis
ENSSSCG00000039498RBFOX38475.540ENSTBEG00000004296-7473.022Tupaia_belangeri
ENSSSCG00000039498RBFOX39690.823ENSTTRG00000003676RBFOX38888.608Tursiops_truncatus
ENSSSCG00000039498RBFOX38297.026ENSUAMG00000004668RBFOX38697.026Ursus_americanus
ENSSSCG00000039498RBFOX39697.785ENSVVUG00000017864RBFOX38697.770Vulpes_vulpes
ENSSSCG00000039498RBFOX310059.104ENSXETG00000020236rbfox38457.778Xenopus_tropicalis
ENSSSCG00000039498RBFOX39669.279ENSXCOG00000018262rbfox3b7688.462Xiphophorus_couchianus
ENSSSCG00000039498RBFOX310071.687ENSXMAG00000012939rbfox3b7380.882Xiphophorus_maculatus

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