EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000039516 (Gene tree)
Gene ID: 100624753
Gene Symbol: LRRC47
Alias: KIAA1185|RP1-286D6.3
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 13840 bases
Position: chr6:65257997-65271836
Accession: 100624753
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000049377	B3_4	PF03483.17	4.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000036719	LRRC47-201	6340	XM_021095231	ENSSSCP00000049377	583 (aa)	XP_020950890	A0A287AYY7

Gene Model

Click here to download ENSSSCG00000039516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000039516	LRRC47	99	83.333	ENSG00000130764	LRRC47	99	83.849	Homo_sapiens
ENSSSCG00000039516	LRRC47	99	54.167	ENSAPOG00000019553	lrrc47	99	53.993	Acanthochromis_polyacanthus
ENSSSCG00000039516	LRRC47	79	79.826	ENSAMEG00000009152	LRRC47	100	79.176	Ailuropoda_melanoleuca
ENSSSCG00000039516	LRRC47	66	66.753	ENSAPLG00000003167	LRRC47	99	66.753	Anas_platyrhynchos
ENSSSCG00000039516	LRRC47	65	67.546	ENSACAG00000008267	LRRC47	99	67.282	Anolis_carolinensis
ENSSSCG00000039516	LRRC47	99	82.990	ENSANAG00000025576	LRRC47	99	83.505	Aotus_nancymaae
ENSSSCG00000039516	LRRC47	100	89.537	ENSBTAG00000004738	LRRC47	100	89.365	Bos_taurus
ENSSSCG00000039516	LRRC47	95	85.971	ENSCAFG00000019492	LRRC47	99	85.567	Canis_familiaris
ENSSSCG00000039516	LRRC47	100	85.592	ENSCAFG00020009667	LRRC47	100	85.592	Canis_lupus_dingo
ENSSSCG00000039516	LRRC47	100	89.194	ENSCHIG00000022607	LRRC47	99	88.488	Capra_hircus
ENSSSCG00000039516	LRRC47	95	81.688	ENSTSYG00000009326	LRRC47	96	83.483	Carlito_syrichta
ENSSSCG00000039516	LRRC47	65	77.454	ENSCAPG00000016517	LRRC47	100	76.190	Cavia_aperea
ENSSSCG00000039516	LRRC47	99	82.272	ENSCPOG00000014931	LRRC47	96	81.443	Cavia_porcellus
ENSSSCG00000039516	LRRC47	99	82.990	ENSCCAG00000024895	LRRC47	99	83.505	Cebus_capucinus
ENSSSCG00000039516	LRRC47	99	84.192	ENSCATG00000029337	LRRC47	99	84.192	Cercocebus_atys
ENSSSCG00000039516	LRRC47	99	82.272	ENSCLAG00000006093	LRRC47	99	80.895	Chinchilla_lanigera
ENSSSCG00000039516	LRRC47	99	84.192	ENSCSAG00000000727	LRRC47	99	84.192	Chlorocebus_sabaeus
ENSSSCG00000039516	LRRC47	99	62.396	ENSCPBG00000019404	LRRC47	100	62.396	Chrysemys_picta_bellii
ENSSSCG00000039516	LRRC47	78	80.911	ENSCANG00000030701	LRRC47	96	79.826	Colobus_angolensis_palliatus
ENSSSCG00000039516	LRRC47	99	80.000	ENSCGRG00001015159	Lrrc47	90	79.381	Cricetulus_griseus_chok1gshd
ENSSSCG00000039516	LRRC47	65	73.210	ENSCGRG00000017336	Lrrc47	100	73.210	Cricetulus_griseus_crigri
ENSSSCG00000039516	LRRC47	98	51.652	ENSCSEG00000006217	lrrc47	97	51.979	Cynoglossus_semilaevis
ENSSSCG00000039516	LRRC47	64	77.128	ENSDORG00000016594	Lrrc47	99	77.719	Dipodomys_ordii
ENSSSCG00000039516	LRRC47	99	87.285	ENSEASG00005021788	LRRC47	99	87.285	Equus_asinus_asinus
ENSSSCG00000039516	LRRC47	99	86.851	ENSECAG00000022472	LRRC47	90	86.942	Equus_caballus
ENSSSCG00000039516	LRRC47	99	51.361	ENSELUG00000017544	lrrc47	98	51.531	Esox_lucius
ENSSSCG00000039516	LRRC47	94	85.009	ENSFCAG00000011632	LRRC47	97	84.964	Felis_catus
ENSSSCG00000039516	LRRC47	74	63.972	ENSFALG00000009631	LRRC47	99	64.384	Ficedula_albicollis
ENSSSCG00000039516	LRRC47	97	51.499	ENSGMOG00000015674	lrrc47	97	51.499	Gadus_morhua
ENSSSCG00000039516	LRRC47	98	62.630	ENSGALG00000050995	LRRC47	99	63.841	Gallus_gallus
ENSSSCG00000039516	LRRC47	98	53.752	ENSGACG00000005550	lrrc47	98	53.578	Gasterosteus_aculeatus
ENSSSCG00000039516	LRRC47	100	63.411	ENSGAGG00000022584	LRRC47	100	63.727	Gopherus_agassizii
ENSSSCG00000039516	LRRC47	99	83.849	ENSGGOG00000015571	LRRC47	99	84.364	Gorilla_gorilla
ENSSSCG00000039516	LRRC47	99	80.584	ENSHGLG00000018278	LRRC47	96	79.518	Heterocephalus_glaber_female
ENSSSCG00000039516	LRRC47	69	78.025	ENSHGLG00100008507	LRRC47	100	74.505	Heterocephalus_glaber_male
ENSSSCG00000039516	LRRC47	98	54.498	ENSHCOG00000006348	lrrc47	97	54.609	Hippocampus_comes
ENSSSCG00000039516	LRRC47	99	83.932	ENSSTOG00000027559	LRRC47	99	84.165	Ictidomys_tridecemlineatus
ENSSSCG00000039516	LRRC47	99	82.496	ENSJJAG00000017474	Lrrc47	97	81.756	Jaculus_jaculus
ENSSSCG00000039516	LRRC47	99	53.184	ENSKMAG00000003414	lrrc47	99	53.125	Kryptolebias_marmoratus
ENSSSCG00000039516	LRRC47	99	83.677	ENSLAFG00000011657	LRRC47	99	83.505	Loxodonta_africana
ENSSSCG00000039516	LRRC47	74	92.683	ENSMFAG00000045730	LRRC47	89	92.683	Macaca_fascicularis
ENSSSCG00000039516	LRRC47	100	84.418	ENSMNEG00000042488	LRRC47	100	84.247	Macaca_nemestrina
ENSSSCG00000039516	LRRC47	77	80.266	ENSMLEG00000043735	LRRC47	91	79.157	Mandrillus_leucophaeus
ENSSSCG00000039516	LRRC47	99	80.277	ENSMAUG00000021337	Lrrc47	98	79.931	Mesocricetus_auratus
ENSSSCG00000039516	LRRC47	99	82.960	ENSMICG00000026816	LRRC47	99	82.960	Microcebus_murinus
ENSSSCG00000039516	LRRC47	99	81.067	ENSMOCG00000021279	Lrrc47	99	80.723	Microtus_ochrogaster
ENSSSCG00000039516	LRRC47	98	53.565	ENSMMOG00000017007	lrrc47	99	53.217	Mola_mola
ENSSSCG00000039516	LRRC47	99	70.957	ENSMODG00000006554	LRRC47	100	70.819	Monodelphis_domestica
ENSSSCG00000039516	LRRC47	99	81.834	MGP_CAROLIEiJ_G0026864	Lrrc47	99	80.756	Mus_caroli
ENSSSCG00000039516	LRRC47	99	82.007	ENSMUSG00000029028	Lrrc47	99	80.928	Mus_musculus
ENSSSCG00000039516	LRRC47	99	80.556	MGP_PahariEiJ_G0029212	Lrrc47	99	80.756	Mus_pahari
ENSSSCG00000039516	LRRC47	99	81.834	MGP_SPRETEiJ_G0027857	Lrrc47	99	80.756	Mus_spretus
ENSSSCG00000039516	LRRC47	65	80.688	ENSMPUG00000007321	LRRC47	75	80.688	Mustela_putorius_furo
ENSSSCG00000039516	LRRC47	98	81.326	ENSNGAG00000022153	Lrrc47	99	80.379	Nannospalax_galili
ENSSSCG00000039516	LRRC47	99	81.615	ENSNLEG00000008131	LRRC47	99	81.615	Nomascus_leucogenys
ENSSSCG00000039516	LRRC47	84	79.592	ENSODEG00000010882	LRRC47	93	78.163	Octodon_degus
ENSSSCG00000039516	LRRC47	96	55.338	ENSORLG00000002532	lrrc47	99	55.197	Oryzias_latipes
ENSSSCG00000039516	LRRC47	98	55.095	ENSORLG00020019601	lrrc47	99	55.478	Oryzias_latipes_hni
ENSSSCG00000039516	LRRC47	98	54.577	ENSORLG00015014040	lrrc47	99	54.957	Oryzias_latipes_hsok
ENSSSCG00000039516	LRRC47	98	55.268	ENSOMEG00000008989	lrrc47	99	55.304	Oryzias_melastigma
ENSSSCG00000039516	LRRC47	99	83.333	ENSOGAG00000001553	LRRC47	99	84.192	Otolemur_garnettii
ENSSSCG00000039516	LRRC47	100	85.592	ENSOARG00000015290	LRRC47	100	85.592	Ovis_aries
ENSSSCG00000039516	LRRC47	97	81.499	ENSPPAG00000036370	-	99	81.499	Pan_paniscus
ENSSSCG00000039516	LRRC47	99	84.749	ENSPPRG00000005261	LRRC47	99	84.708	Panthera_pardus
ENSSSCG00000039516	LRRC47	99	83.677	ENSPTRG00000000068	LRRC47	99	84.192	Pan_troglodytes
ENSSSCG00000039516	LRRC47	99	84.192	ENSPANG00000012437	LRRC47	99	84.192	Papio_anubis
ENSSSCG00000039516	LRRC47	65	67.895	ENSPSIG00000004196	LRRC47	100	68.158	Pelodiscus_sinensis
ENSSSCG00000039516	LRRC47	65	76.923	ENSPEMG00000021068	Lrrc47	100	76.127	Peromyscus_maniculatus_bairdii
ENSSSCG00000039516	LRRC47	98	74.869	ENSPCIG00000003638	LRRC47	100	74.573	Phascolarctos_cinereus
ENSSSCG00000039516	LRRC47	93	55.128	ENSPFOG00000000992	lrrc47	95	54.945	Poecilia_formosa
ENSSSCG00000039516	LRRC47	98	55.749	ENSPLAG00000008077	lrrc47	99	55.575	Poecilia_latipinna
ENSSSCG00000039516	LRRC47	98	55.729	ENSPMEG00000007367	lrrc47	99	55.556	Poecilia_mexicana
ENSSSCG00000039516	LRRC47	99	83.505	ENSPPYG00000001960	LRRC47	99	84.021	Pongo_abelii
ENSSSCG00000039516	LRRC47	100	83.533	ENSPCOG00000019161	LRRC47	100	83.533	Propithecus_coquereli
ENSSSCG00000039516	LRRC47	99	85.763	ENSPVAG00000009839	LRRC47	99	84.880	Pteropus_vampyrus
ENSSSCG00000039516	LRRC47	100	53.162	ENSPNAG00000017982	lrrc47	100	52.991	Pygocentrus_nattereri
ENSSSCG00000039516	LRRC47	100	81.132	ENSRNOG00000024796	Lrrc47	100	80.789	Rattus_norvegicus
ENSSSCG00000039516	LRRC47	99	84.536	ENSRBIG00000019437	LRRC47	99	84.536	Rhinopithecus_bieti
ENSSSCG00000039516	LRRC47	99	84.536	ENSRROG00000043182	LRRC47	99	84.536	Rhinopithecus_roxellana
ENSSSCG00000039516	LRRC47	80	79.789	ENSSBOG00000026334	LRRC47	97	79.789	Saimiri_boliviensis_boliviensis
ENSSSCG00000039516	LRRC47	98	60.997	ENSSHAG00000007360	LRRC47	99	61.083	Sarcophilus_harrisii
ENSSSCG00000039516	LRRC47	98	55.363	ENSSMAG00000009344	lrrc47	99	55.575	Scophthalmus_maximus
ENSSSCG00000039516	LRRC47	98	52.504	ENSSDUG00000014618	lrrc47	99	53.565	Seriola_dumerili
ENSSSCG00000039516	LRRC47	98	53.713	ENSSLDG00000018908	lrrc47	99	53.913	Seriola_lalandi_dorsalis
ENSSSCG00000039516	LRRC47	99	61.840	ENSSPUG00000010277	LRRC47	99	62.458	Sphenodon_punctatus
ENSSSCG00000039516	LRRC47	99	55.882	ENSSPAG00000005188	lrrc47	99	55.709	Stegastes_partitus
ENSSSCG00000039516	LRRC47	70	65.366	ENSTGUG00000002737	LRRC47	99	64.951	Taeniopygia_guttata
ENSSSCG00000039516	LRRC47	98	52.522	ENSTRUG00000017696	lrrc47	99	52.091	Takifugu_rubripes
ENSSSCG00000039516	LRRC47	98	52.870	ENSTNIG00000010923	lrrc47	99	52.696	Tetraodon_nigroviridis
ENSSSCG00000039516	LRRC47	99	88.660	ENSTTRG00000011751	LRRC47	99	88.660	Tursiops_truncatus
ENSSSCG00000039516	LRRC47	88	84.211	ENSUAMG00000012080	LRRC47	97	84.211	Ursus_americanus
ENSSSCG00000039516	LRRC47	65	80.052	ENSUMAG00000010781	LRRC47	81	80.052	Ursus_maritimus
ENSSSCG00000039516	LRRC47	99	78.401	ENSVVUG00000027118	LRRC47	94	80.797	Vulpes_vulpes
ENSSSCG00000039516	LRRC47	99	59.278	ENSXETG00000006029	lrrc47	99	59.278	Xenopus_tropicalis
ENSSSCG00000039516	LRRC47	98	55.517	ENSXCOG00000002813	lrrc47	98	55.166	Xiphophorus_couchianus
ENSSSCG00000039516	LRRC47	98	55.323	ENSXMAG00000019386	lrrc47	99	55.052	Xiphophorus_maculatus