EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000039568 (Gene tree)
Gene ID: 102162332
Gene Symbol: SNAI2
Alias: SLUG|SLUGH|SLUGH1|SNAIL2
Full Name: snail family transcriptional repressor 2
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 6925 bases
Position: chr4:79264878-79271802
Accession: 102162332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000037603	zf-C2H2	PF00096.26	3.4e-26	1	5
ENSSSCP00000037603	zf-C2H2	PF00096.26	3.4e-26	2	5
ENSSSCP00000037603	zf-C2H2	PF00096.26	3.4e-26	3	5
ENSSSCP00000037603	zf-C2H2	PF00096.26	3.4e-26	4	5
ENSSSCP00000037603	zf-C2H2	PF00096.26	3.4e-26	5	5
ENSSSCP00000039262	zf-C2H2	PF00096.26	4.3e-26	1	5
ENSSSCP00000039262	zf-C2H2	PF00096.26	4.3e-26	2	5
ENSSSCP00000039262	zf-C2H2	PF00096.26	4.3e-26	3	5
ENSSSCP00000039262	zf-C2H2	PF00096.26	4.3e-26	4	5
ENSSSCP00000039262	zf-C2H2	PF00096.26	4.3e-26	5	5
ENSSSCP00000037603	zf-met	PF12874.7	2.3e-06	1	1
ENSSSCP00000039262	zf-met	PF12874.7	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042681	SNAI2-201	6006	-	ENSSSCP00000039262	267 (aa)	-	A0A287A5W7
ENSSSCT00000048563	SNAI2-202	5184	XM_005663090	ENSSSCP00000037603	268 (aa)	XP_005663147	A0A287A115

Gene Model

Click here to download ENSSSCG00000039568's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc04390	Hippo signaling pathway	KEGG
ssc04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000039568	SNAI2	99	53.791	ENSSSCG00000032613	SNAI1	98	52.708

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000039568	SNAI2	100	95.149	ENSG00000019549	SNAI2	100	95.149	Homo_sapiens
ENSSSCG00000039568	SNAI2	99	50.512	ENSG00000185669	SNAI3	99	49.338	Homo_sapiens
ENSSSCG00000039568	SNAI2	100	95.896	ENSAMEG00000009606	SNAI2	100	95.896	Ailuropoda_melanoleuca
ENSSSCG00000039568	SNAI2	99	49.660	ENSANAG00000032748	SNAI3	99	46.945	Aotus_nancymaae
ENSSSCG00000039568	SNAI2	100	95.149	ENSANAG00000021163	SNAI2	100	95.149	Aotus_nancymaae
ENSSSCG00000039568	SNAI2	99	44.771	ENSBTAG00000017528	SNAI3	99	47.959	Bos_taurus
ENSSSCG00000039568	SNAI2	100	93.657	ENSBTAG00000013227	SNAI2	100	93.657	Bos_taurus
ENSSSCG00000039568	SNAI2	100	95.149	ENSCJAG00000013499	SNAI2	100	95.149	Callithrix_jacchus
ENSSSCG00000039568	SNAI2	52	75.362	ENSCAFG00000029458	SNAI3	99	45.806	Canis_familiaris
ENSSSCG00000039568	SNAI2	100	95.149	ENSCAFG00000006638	SNAI2	100	95.149	Canis_familiaris
ENSSSCG00000039568	SNAI2	100	95.149	ENSCAFG00020015384	SNAI2	100	95.149	Canis_lupus_dingo
ENSSSCG00000039568	SNAI2	52	76.087	ENSCAFG00020004719	SNAI3	99	46.129	Canis_lupus_dingo
ENSSSCG00000039568	SNAI2	100	93.284	ENSCHIG00000024410	SNAI2	100	93.284	Capra_hircus
ENSSSCG00000039568	SNAI2	99	46.358	ENSCHIG00000018087	SNAI3	99	47.959	Capra_hircus
ENSSSCG00000039568	SNAI2	54	72.000	ENSTSYG00000025594	SNAI3	52	72.000	Carlito_syrichta
ENSSSCG00000039568	SNAI2	90	93.776	ENSTSYG00000030892	SNAI2	90	93.776	Carlito_syrichta
ENSSSCG00000039568	SNAI2	84	93.274	ENSCAPG00000013078	SNAI2	100	93.274	Cavia_aperea
ENSSSCG00000039568	SNAI2	100	95.149	ENSCCAG00000024100	SNAI2	100	95.149	Cebus_capucinus
ENSSSCG00000039568	SNAI2	100	95.149	ENSCATG00000028656	SNAI2	100	95.149	Cercocebus_atys
ENSSSCG00000039568	SNAI2	99	47.883	ENSCATG00000031714	SNAI3	99	49.175	Cercocebus_atys
ENSSSCG00000039568	SNAI2	100	94.403	ENSCLAG00000011797	SNAI2	100	94.403	Chinchilla_lanigera
ENSSSCG00000039568	SNAI2	100	95.149	ENSCSAG00000014787	SNAI2	100	95.149	Chlorocebus_sabaeus
ENSSSCG00000039568	SNAI2	100	91.418	ENSCPBG00000020255	SNAI2	100	91.418	Chrysemys_picta_bellii
ENSSSCG00000039568	SNAI2	99	51.466	ENSCPBG00000023474	SNAI3	99	52.365	Chrysemys_picta_bellii
ENSSSCG00000039568	SNAI2	59	58.599	ENSCSAVG00000009819	-	81	58.599	Ciona_savignyi
ENSSSCG00000039568	SNAI2	100	95.149	ENSCANG00000029656	SNAI2	100	95.149	Colobus_angolensis_palliatus
ENSSSCG00000039568	SNAI2	100	94.776	ENSCGRG00001013674	Snai2	100	94.776	Cricetulus_griseus_chok1gshd
ENSSSCG00000039568	SNAI2	99	47.552	ENSCGRG00001011389	Snai3	99	47.203	Cricetulus_griseus_chok1gshd
ENSSSCG00000039568	SNAI2	99	47.552	ENSCGRG00000014932	Snai3	99	47.203	Cricetulus_griseus_crigri
ENSSSCG00000039568	SNAI2	100	94.776	ENSCGRG00000012119	Snai2	100	94.776	Cricetulus_griseus_crigri
ENSSSCG00000039568	SNAI2	78	35.268	ENSDNOG00000035204	-	100	34.081	Dasypus_novemcinctus
ENSSSCG00000039568	SNAI2	100	91.791	ENSDORG00000029620	Snai2	100	91.791	Dipodomys_ordii
ENSSSCG00000039568	SNAI2	99	47.315	ENSECAG00000012131	SNAI3	99	46.774	Equus_caballus
ENSSSCG00000039568	SNAI2	99	56.507	ENSELUG00000018742	-	99	56.597	Esox_lucius
ENSSSCG00000039568	SNAI2	100	79.478	ENSELUG00000021795	SNAI2	79	78.358	Esox_lucius
ENSSSCG00000039568	SNAI2	99	44.928	ENSFCAG00000043885	SNAI3	99	46.209	Felis_catus
ENSSSCG00000039568	SNAI2	89	63.445	ENSFALG00000012974	-	98	64.167	Ficedula_albicollis
ENSSSCG00000039568	SNAI2	100	95.149	ENSFDAG00000016958	SNAI2	100	95.149	Fukomys_damarensis
ENSSSCG00000039568	SNAI2	100	91.418	ENSGAGG00000000426	SNAI2	100	91.418	Gopherus_agassizii
ENSSSCG00000039568	SNAI2	99	51.667	ENSGAGG00000023571	SNAI3	99	53.220	Gopherus_agassizii
ENSSSCG00000039568	SNAI2	100	95.149	ENSGGOG00000000959	SNAI2	100	95.149	Gorilla_gorilla
ENSSSCG00000039568	SNAI2	99	50.000	ENSGGOG00000012559	SNAI3	99	50.331	Gorilla_gorilla
ENSSSCG00000039568	SNAI2	100	71.747	ENSHCOG00000019435	SNAI2	100	73.978	Hippocampus_comes
ENSSSCG00000039568	SNAI2	100	70.896	ENSIPUG00000000131	snai2	100	70.522	Ictalurus_punctatus
ENSSSCG00000039568	SNAI2	100	94.776	ENSSTOG00000028743	SNAI2	100	94.776	Ictidomys_tridecemlineatus
ENSSSCG00000039568	SNAI2	99	47.475	ENSJJAG00000019934	Snai3	99	45.659	Jaculus_jaculus
ENSSSCG00000039568	SNAI2	52	86.429	ENSLOCG00000004887	SNAI3	92	83.444	Lepisosteus_oculatus
ENSSSCG00000039568	SNAI2	100	86.194	ENSLOCG00000005992	SNAI2	100	86.194	Lepisosteus_oculatus
ENSSSCG00000039568	SNAI2	99	57.565	ENSLAFG00000005117	SNAI3	99	57.565	Loxodonta_africana
ENSSSCG00000039568	SNAI2	100	94.776	ENSLAFG00000009299	SNAI2	100	94.776	Loxodonta_africana
ENSSSCG00000039568	SNAI2	99	50.165	ENSMFAG00000032064	SNAI3	99	49.175	Macaca_fascicularis
ENSSSCG00000039568	SNAI2	100	95.149	ENSMFAG00000046061	SNAI2	100	95.149	Macaca_fascicularis
ENSSSCG00000039568	SNAI2	99	50.165	ENSMMUG00000008716	SNAI3	99	49.175	Macaca_mulatta
ENSSSCG00000039568	SNAI2	100	95.149	ENSMMUG00000016195	SNAI2	100	95.149	Macaca_mulatta
ENSSSCG00000039568	SNAI2	99	50.495	ENSMNEG00000045515	SNAI3	99	49.505	Macaca_nemestrina
ENSSSCG00000039568	SNAI2	100	95.149	ENSMNEG00000034216	SNAI2	100	95.149	Macaca_nemestrina
ENSSSCG00000039568	SNAI2	100	95.149	ENSMLEG00000034407	SNAI2	100	95.149	Mandrillus_leucophaeus
ENSSSCG00000039568	SNAI2	100	94.403	ENSMAUG00000008119	Snai2	100	94.403	Mesocricetus_auratus
ENSSSCG00000039568	SNAI2	100	94.403	ENSMOCG00000006622	Snai2	100	94.403	Microtus_ochrogaster
ENSSSCG00000039568	SNAI2	100	92.537	ENSMODG00000010173	SNAI2	100	92.537	Monodelphis_domestica
ENSSSCG00000039568	SNAI2	100	93.309	MGP_CAROLIEiJ_G0020483	Snai2	100	93.309	Mus_caroli
ENSSSCG00000039568	SNAI2	100	92.565	ENSMUSG00000022676	Snai2	100	92.565	Mus_musculus
ENSSSCG00000039568	SNAI2	100	93.309	MGP_PahariEiJ_G0016188	Snai2	100	93.309	Mus_pahari
ENSSSCG00000039568	SNAI2	100	92.937	MGP_SPRETEiJ_G0021379	Snai2	100	92.937	Mus_spretus
ENSSSCG00000039568	SNAI2	100	95.896	ENSMPUG00000010793	SNAI2	100	95.896	Mustela_putorius_furo
ENSSSCG00000039568	SNAI2	99	50.175	ENSMPUG00000008104	SNAI3	99	48.837	Mustela_putorius_furo
ENSSSCG00000039568	SNAI2	100	94.776	ENSMLUG00000001086	SNAI2	100	94.776	Myotis_lucifugus
ENSSSCG00000039568	SNAI2	99	45.425	ENSNGAG00000023039	Snai3	99	45.425	Nannospalax_galili
ENSSSCG00000039568	SNAI2	99	50.340	ENSNLEG00000000595	SNAI3	99	49.338	Nomascus_leucogenys
ENSSSCG00000039568	SNAI2	100	94.403	ENSNLEG00000013421	SNAI2	100	94.403	Nomascus_leucogenys
ENSSSCG00000039568	SNAI2	97	92.337	ENSMEUG00000009510	SNAI2	100	92.337	Notamacropus_eugenii
ENSSSCG00000039568	SNAI2	100	91.791	ENSOANG00000007267	SNAI2	100	91.791	Ornithorhynchus_anatinus
ENSSSCG00000039568	SNAI2	99	48.276	ENSOGAG00000000419	SNAI3	99	47.059	Otolemur_garnettii
ENSSSCG00000039568	SNAI2	100	93.284	ENSOARG00000013030	SNAI2	100	93.284	Ovis_aries
ENSSSCG00000039568	SNAI2	99	49.660	ENSPPAG00000043301	SNAI3	99	50.000	Pan_paniscus
ENSSSCG00000039568	SNAI2	100	95.149	ENSPPAG00000015662	SNAI2	100	95.149	Pan_paniscus
ENSSSCG00000039568	SNAI2	99	45.652	ENSPPRG00000008511	SNAI3	99	45.487	Panthera_pardus
ENSSSCG00000039568	SNAI2	100	95.896	ENSPPRG00000012562	-	100	95.896	Panthera_pardus
ENSSSCG00000039568	SNAI2	91	95.082	ENSPTIG00000007593	SNAI2	77	95.455	Panthera_tigris_altaica
ENSSSCG00000039568	SNAI2	99	50.000	ENSPTRG00000008460	SNAI3	99	49.007	Pan_troglodytes
ENSSSCG00000039568	SNAI2	100	95.149	ENSPTRG00000020235	SNAI2	100	95.149	Pan_troglodytes
ENSSSCG00000039568	SNAI2	100	95.149	ENSPANG00000017540	SNAI2	100	95.149	Papio_anubis
ENSSSCG00000039568	SNAI2	99	48.208	ENSPANG00000000509	SNAI3	99	49.505	Papio_anubis
ENSSSCG00000039568	SNAI2	100	84.328	ENSPKIG00000002254	SNAI2	100	84.328	Paramormyrops_kingsleyae
ENSSSCG00000039568	SNAI2	99	53.000	ENSPKIG00000007872	SNAI3	99	55.017	Paramormyrops_kingsleyae
ENSSSCG00000039568	SNAI2	100	91.045	ENSPSIG00000016395	SNAI2	100	91.045	Pelodiscus_sinensis
ENSSSCG00000039568	SNAI2	53	80.986	ENSPSIG00000004262	SNAI3	56	80.986	Pelodiscus_sinensis
ENSSSCG00000039568	SNAI2	100	77.239	ENSPMGG00000013179	SNAI2	100	75.746	Periophthalmus_magnuspinnatus
ENSSSCG00000039568	SNAI2	100	94.403	ENSPEMG00000011739	Snai2	100	94.403	Peromyscus_maniculatus_bairdii
ENSSSCG00000039568	SNAI2	100	92.910	ENSPCIG00000025156	SNAI2	100	92.910	Phascolarctos_cinereus
ENSSSCG00000039568	SNAI2	100	73.034	ENSPREG00000008528	SNAI2	93	71.536	Poecilia_reticulata
ENSSSCG00000039568	SNAI2	99	50.508	ENSPPYG00000007643	SNAI3	99	50.662	Pongo_abelii
ENSSSCG00000039568	SNAI2	100	95.149	ENSPPYG00000018578	SNAI2	100	95.149	Pongo_abelii
ENSSSCG00000039568	SNAI2	100	95.522	ENSPCOG00000015656	SNAI2	100	95.522	Propithecus_coquereli
ENSSSCG00000039568	SNAI2	100	94.403	ENSPVAG00000009457	SNAI2	100	94.403	Pteropus_vampyrus
ENSSSCG00000039568	SNAI2	100	95.149	ENSRBIG00000041133	SNAI2	100	95.149	Rhinopithecus_bieti
ENSSSCG00000039568	SNAI2	99	50.165	ENSRBIG00000025770	SNAI3	99	50.165	Rhinopithecus_bieti
ENSSSCG00000039568	SNAI2	100	95.149	ENSRROG00000032273	SNAI2	100	95.149	Rhinopithecus_roxellana
ENSSSCG00000039568	SNAI2	99	49.175	ENSRROG00000032757	SNAI3	99	49.175	Rhinopithecus_roxellana
ENSSSCG00000039568	SNAI2	100	95.149	ENSSBOG00000035774	SNAI2	100	95.149	Saimiri_boliviensis_boliviensis
ENSSSCG00000039568	SNAI2	100	92.910	ENSSHAG00000004205	SNAI2	100	92.910	Sarcophilus_harrisii
ENSSSCG00000039568	SNAI2	100	82.963	ENSSFOG00015018025	SNAI2	100	82.963	Scleropages_formosus
ENSSSCG00000039568	SNAI2	99	50.495	ENSSFOG00015016115	snai3	93	50.166	Scleropages_formosus
ENSSSCG00000039568	SNAI2	100	91.418	ENSSPUG00000005427	-	100	91.418	Sphenodon_punctatus
ENSSSCG00000039568	SNAI2	99	51.203	ENSUAMG00000020030	SNAI3	99	49.338	Ursus_americanus
ENSSSCG00000039568	SNAI2	86	95.652	ENSUAMG00000014942	SNAI2	100	95.652	Ursus_americanus
ENSSSCG00000039568	SNAI2	98	95.437	ENSUMAG00000006525	SNAI2	100	95.437	Ursus_maritimus
ENSSSCG00000039568	SNAI2	100	95.522	ENSVVUG00000017625	SNAI2	100	95.522	Vulpes_vulpes
ENSSSCG00000039568	SNAI2	99	47.973	ENSVVUG00000003233	SNAI3	99	46.452	Vulpes_vulpes
ENSSSCG00000039568	SNAI2	100	87.687	ENSXETG00000024006	snai2	100	87.687	Xenopus_tropicalis