EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000039635 (Gene tree)
Gene ID: 100526157
Gene Symbol: -
Alias: -
Full Name: NHP2 ribonucleoprotein
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 7392 bases
Position: chr2:80223329-80230720
Accession: 100526157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057380	Ribosomal_L7Ae	PF01248.26	7.8e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000060905	-	4012	XM_003123671	ENSSSCP00000057380	178 (aa)	XP_003123719	A0A287BMH8

Gene Model

Click here to download ENSSSCG00000039635's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000039635's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000039635	-	57	41.748	ENSSSCG00000000058	SNU13	98	36.667
ENSSSCG00000039635	-	67	36.885	ENSSSCG00000036272	-	95	36.885
ENSSSCG00000039635	-	86	79.085	ENSSSCG00000009710	-	100	79.085
ENSSSCG00000039635	-	60	41.121	ENSSSCG00000036849	-	95	35.246

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000039635	-	86	93.464	ENSG00000145912	NHP2	100	93.464	Homo_sapiens
ENSSSCG00000039635	-	86	69.281	ENSAPOG00000004742	nhp2	100	69.281	Acanthochromis_polyacanthus
ENSSSCG00000039635	-	86	97.386	ENSAMEG00000006471	NHP2	100	97.386	Ailuropoda_melanoleuca
ENSSSCG00000039635	-	74	76.515	ENSACIG00000007968	nhp2	100	70.886	Amphilophus_citrinellus
ENSSSCG00000039635	-	86	69.281	ENSAOCG00000016311	nhp2	100	69.281	Amphiprion_ocellaris
ENSSSCG00000039635	-	86	69.281	ENSAPEG00000008765	nhp2	100	69.281	Amphiprion_percula
ENSSSCG00000039635	-	86	70.968	ENSATEG00000009651	nhp2	100	70.968	Anabas_testudineus
ENSSSCG00000039635	-	74	86.364	ENSACAG00000006692	NHP2	87	86.466	Anolis_carolinensis
ENSSSCG00000039635	-	71	79.365	ENSANAG00000031552	-	97	79.365	Aotus_nancymaae
ENSSSCG00000039635	-	84	94.667	ENSANAG00000023290	NHP2	98	94.667	Aotus_nancymaae
ENSSSCG00000039635	-	75	77.444	ENSACLG00000001082	nhp2	100	70.779	Astatotilapia_calliptera
ENSSSCG00000039635	-	86	74.510	ENSAMXG00000005845	nhp2	100	74.510	Astyanax_mexicanus
ENSSSCG00000039635	-	86	98.693	ENSBTAG00000006374	NHP2	100	98.693	Bos_taurus
ENSSSCG00000039635	-	78	48.592	WBGene00012964	Y48A6B.3	87	48.592	Caenorhabditis_elegans
ENSSSCG00000039635	-	84	92.000	ENSCJAG00000023093	-	98	92.000	Callithrix_jacchus
ENSSSCG00000039635	-	84	93.333	ENSCJAG00000038564	-	98	93.333	Callithrix_jacchus
ENSSSCG00000039635	-	86	96.732	ENSCAFG00000000240	NHP2	100	96.732	Canis_familiaris
ENSSSCG00000039635	-	86	98.693	ENSCHIG00000015159	NHP2	100	98.693	Capra_hircus
ENSSSCG00000039635	-	84	71.333	ENSTSYG00000008150	NHP2	98	71.333	Carlito_syrichta
ENSSSCG00000039635	-	86	94.771	ENSCPOG00000033753	NHP2	100	94.771	Cavia_porcellus
ENSSSCG00000039635	-	84	94.667	ENSCCAG00000034815	NHP2	98	94.667	Cebus_capucinus
ENSSSCG00000039635	-	84	78.667	ENSCCAG00000027964	-	98	78.667	Cebus_capucinus
ENSSSCG00000039635	-	84	75.333	ENSCCAG00000034664	-	98	75.333	Cebus_capucinus
ENSSSCG00000039635	-	86	93.464	ENSCATG00000043608	NHP2	100	93.464	Cercocebus_atys
ENSSSCG00000039635	-	86	93.464	ENSCLAG00000016005	NHP2	100	93.464	Chinchilla_lanigera
ENSSSCG00000039635	-	86	93.464	ENSCSAG00000008690	NHP2	100	93.464	Chlorocebus_sabaeus
ENSSSCG00000039635	-	86	94.118	ENSCHOG00000013038	NHP2	100	94.118	Choloepus_hoffmanni
ENSSSCG00000039635	-	74	83.333	ENSCPBG00000022106	NHP2	100	76.471	Chrysemys_picta_bellii
ENSSSCG00000039635	-	73	63.846	ENSCSAVG00000008036	-	86	63.846	Ciona_savignyi
ENSSSCG00000039635	-	81	87.586	ENSCANG00000038441	-	92	93.846	Colobus_angolensis_palliatus
ENSSSCG00000039635	-	86	92.810	ENSCANG00000031562	NHP2	100	92.810	Colobus_angolensis_palliatus
ENSSSCG00000039635	-	86	87.582	ENSCGRG00001005326	Nhp2	100	87.582	Cricetulus_griseus_chok1gshd
ENSSSCG00000039635	-	86	87.582	ENSCGRG00000013680	Nhp2	100	87.582	Cricetulus_griseus_crigri
ENSSSCG00000039635	-	86	70.968	ENSCSEG00000006761	nhp2	100	70.968	Cynoglossus_semilaevis
ENSSSCG00000039635	-	86	69.935	ENSDARG00000069422	nhp2	100	69.935	Danio_rerio
ENSSSCG00000039635	-	87	93.548	ENSDNOG00000017150	NHP2	96	93.548	Dasypus_novemcinctus
ENSSSCG00000039635	-	86	94.118	ENSDORG00000003312	Nhp2	100	94.118	Dipodomys_ordii
ENSSSCG00000039635	-	75	48.507	FBgn0029148	NHP2	84	48.507	Drosophila_melanogaster
ENSSSCG00000039635	-	86	92.208	ENSETEG00000006774	NHP2	100	92.208	Echinops_telfairi
ENSSSCG00000039635	-	86	97.386	ENSEASG00005012569	NHP2	100	97.386	Equus_asinus_asinus
ENSSSCG00000039635	-	81	97.931	ENSECAG00000022963	NHP2	83	97.931	Equus_caballus
ENSSSCG00000039635	-	56	81.000	ENSELUG00000021981	nhp2	85	81.000	Esox_lucius
ENSSSCG00000039635	-	86	97.386	ENSFCAG00000015541	NHP2	100	97.386	Felis_catus
ENSSSCG00000039635	-	74	83.206	ENSFALG00000008774	NHP2	91	78.767	Ficedula_albicollis
ENSSSCG00000039635	-	86	86.275	ENSFDAG00000008131	NHP2	100	86.275	Fukomys_damarensis
ENSSSCG00000039635	-	86	71.154	ENSFHEG00000000431	nhp2	100	71.154	Fundulus_heteroclitus
ENSSSCG00000039635	-	75	81.203	ENSGMOG00000000278	nhp2	100	74.172	Gadus_morhua
ENSSSCG00000039635	-	68	85.124	ENSGALG00000033666	NHP2	73	84.553	Gallus_gallus
ENSSSCG00000039635	-	75	78.195	ENSGAFG00000009838	nhp2	100	73.077	Gambusia_affinis
ENSSSCG00000039635	-	75	75.373	ENSGACG00000020889	nhp2	100	69.281	Gasterosteus_aculeatus
ENSSSCG00000039635	-	56	81.188	ENSGAGG00000006901	NHP2	81	81.188	Gopherus_agassizii
ENSSSCG00000039635	-	86	76.471	ENSGGOG00000040409	-	100	76.471	Gorilla_gorilla
ENSSSCG00000039635	-	86	76.471	ENSGGOG00000027198	-	100	76.471	Gorilla_gorilla
ENSSSCG00000039635	-	74	78.030	ENSHBUG00000010207	nhp2	100	71.429	Haplochromis_burtoni
ENSSSCG00000039635	-	86	83.007	ENSHGLG00000014450	-	100	83.007	Heterocephalus_glaber_female
ENSSSCG00000039635	-	86	93.464	ENSHGLG00000013630	NHP2	100	93.464	Heterocephalus_glaber_female
ENSSSCG00000039635	-	86	83.007	ENSHGLG00100005282	-	100	83.007	Heterocephalus_glaber_male
ENSSSCG00000039635	-	86	83.007	ENSHGLG00100003440	-	100	83.007	Heterocephalus_glaber_male
ENSSSCG00000039635	-	86	93.464	ENSHGLG00100007298	NHP2	100	93.464	Heterocephalus_glaber_male
ENSSSCG00000039635	-	86	67.722	ENSHCOG00000019552	nhp2	100	67.722	Hippocampus_comes
ENSSSCG00000039635	-	86	75.817	ENSIPUG00000024197	NHP2	100	75.817	Ictalurus_punctatus
ENSSSCG00000039635	-	86	95.425	ENSSTOG00000003235	NHP2	100	95.425	Ictidomys_tridecemlineatus
ENSSSCG00000039635	-	86	90.196	ENSJJAG00000016469	Nhp2	100	90.850	Jaculus_jaculus
ENSSSCG00000039635	-	86	69.032	ENSLBEG00000002128	nhp2	100	69.032	Labrus_bergylta
ENSSSCG00000039635	-	86	75.325	ENSLACG00000017167	NHP2	99	75.325	Latimeria_chalumnae
ENSSSCG00000039635	-	75	80.451	ENSLOCG00000009630	nhp2	100	72.549	Lepisosteus_oculatus
ENSSSCG00000039635	-	86	96.078	ENSLAFG00000012828	NHP2	100	96.078	Loxodonta_africana
ENSSSCG00000039635	-	86	93.464	ENSMFAG00000032376	NHP2	100	93.464	Macaca_fascicularis
ENSSSCG00000039635	-	86	66.667	ENSMMUG00000046673	-	100	66.667	Macaca_mulatta
ENSSSCG00000039635	-	86	93.464	ENSMNEG00000038787	NHP2	100	93.464	Macaca_nemestrina
ENSSSCG00000039635	-	86	93.464	ENSMLEG00000028639	NHP2	100	93.464	Mandrillus_leucophaeus
ENSSSCG00000039635	-	86	71.795	ENSMAMG00000022425	nhp2	100	71.795	Mastacembelus_armatus
ENSSSCG00000039635	-	75	77.444	ENSMZEG00005027834	nhp2	100	70.779	Maylandia_zebra
ENSSSCG00000039635	-	56	83.000	ENSMGAG00000003917	NHP2	100	83.000	Meleagris_gallopavo
ENSSSCG00000039635	-	86	94.771	ENSMICG00000005379	NHP2	100	94.771	Microcebus_murinus
ENSSSCG00000039635	-	86	86.928	ENSMOCG00000022171	Nhp2	100	86.928	Microtus_ochrogaster
ENSSSCG00000039635	-	75	74.436	ENSMMOG00000016811	nhp2	100	68.590	Mola_mola
ENSSSCG00000039635	-	86	77.273	ENSMODG00000004231	NHP2	100	77.273	Monodelphis_domestica
ENSSSCG00000039635	-	85	73.510	ENSMALG00000009613	nhp2	97	73.510	Monopterus_albus
ENSSSCG00000039635	-	86	87.582	MGP_CAROLIEiJ_G0016312	Nhp2	100	87.582	Mus_caroli
ENSSSCG00000039635	-	86	86.928	ENSMUSG00000001056	Nhp2	100	86.928	Mus_musculus
ENSSSCG00000039635	-	86	86.928	MGP_PahariEiJ_G0017447	Nhp2	100	86.928	Mus_pahari
ENSSSCG00000039635	-	86	86.928	MGP_SPRETEiJ_G0017156	Nhp2	100	86.928	Mus_spretus
ENSSSCG00000039635	-	86	94.839	ENSMPUG00000000747	NHP2	100	94.839	Mustela_putorius_furo
ENSSSCG00000039635	-	86	91.503	ENSMLUG00000003377	NHP2	100	91.503	Myotis_lucifugus
ENSSSCG00000039635	-	86	92.157	ENSNGAG00000021818	Nhp2	100	92.157	Nannospalax_galili
ENSSSCG00000039635	-	74	78.788	ENSNBRG00000018016	nhp2	100	72.078	Neolamprologus_brichardi
ENSSSCG00000039635	-	86	79.874	ENSNLEG00000015765	NHP2	100	79.874	Nomascus_leucogenys
ENSSSCG00000039635	-	86	76.623	ENSMEUG00000003839	NHP2	100	76.623	Notamacropus_eugenii
ENSSSCG00000039635	-	86	75.163	ENSOPRG00000007907	NHP2	100	75.163	Ochotona_princeps
ENSSSCG00000039635	-	86	94.771	ENSODEG00000006948	NHP2	100	94.771	Octodon_degus
ENSSSCG00000039635	-	74	79.545	ENSONIG00000017865	nhp2	100	72.727	Oreochromis_niloticus
ENSSSCG00000039635	-	85	93.421	ENSOCUG00000016091	-	99	93.421	Oryctolagus_cuniculus
ENSSSCG00000039635	-	85	94.737	ENSOCUG00000016057	-	99	94.737	Oryctolagus_cuniculus
ENSSSCG00000039635	-	86	74.510	ENSORLG00000029195	nhp2	100	74.510	Oryzias_latipes
ENSSSCG00000039635	-	86	74.510	ENSORLG00020003277	nhp2	100	74.510	Oryzias_latipes_hni
ENSSSCG00000039635	-	86	74.510	ENSORLG00015007851	nhp2	100	74.510	Oryzias_latipes_hsok
ENSSSCG00000039635	-	86	73.203	ENSOMEG00000017381	nhp2	87	73.203	Oryzias_melastigma
ENSSSCG00000039635	-	86	90.323	ENSOGAG00000016108	NHP2	100	90.323	Otolemur_garnettii
ENSSSCG00000039635	-	86	90.850	ENSOARG00000006274	NHP2	100	90.850	Ovis_aries
ENSSSCG00000039635	-	86	76.471	ENSPPAG00000038834	-	100	76.471	Pan_paniscus
ENSSSCG00000039635	-	86	93.464	ENSPPAG00000028668	NHP2	100	93.464	Pan_paniscus
ENSSSCG00000039635	-	86	97.386	ENSPPRG00000022505	NHP2	100	97.386	Panthera_pardus
ENSSSCG00000039635	-	57	99.020	ENSPTIG00000021731	NHP2	81	99.020	Panthera_tigris_altaica
ENSSSCG00000039635	-	81	78.472	ENSPTRG00000050430	-	100	78.472	Pan_troglodytes
ENSSSCG00000039635	-	86	92.810	ENSPTRG00000048185	NHP2	100	92.810	Pan_troglodytes
ENSSSCG00000039635	-	81	78.472	ENSPTRG00000049011	-	100	78.472	Pan_troglodytes
ENSSSCG00000039635	-	86	93.464	ENSPANG00000019121	NHP2	100	93.464	Papio_anubis
ENSSSCG00000039635	-	77	79.562	ENSPKIG00000006410	nhp2	100	74.510	Paramormyrops_kingsleyae
ENSSSCG00000039635	-	80	73.944	ENSPMGG00000002916	nhp2	87	73.944	Periophthalmus_magnuspinnatus
ENSSSCG00000039635	-	86	86.275	ENSPEMG00000023567	Nhp2	100	86.275	Peromyscus_maniculatus_bairdii
ENSSSCG00000039635	-	80	67.361	ENSPMAG00000009888	nhp2	93	67.361	Petromyzon_marinus
ENSSSCG00000039635	-	86	76.623	ENSPCIG00000002727	-	100	76.623	Phascolarctos_cinereus
ENSSSCG00000039635	-	62	80.909	ENSPCIG00000019848	-	92	80.909	Phascolarctos_cinereus
ENSSSCG00000039635	-	86	70.513	ENSPFOG00000002315	nhp2	100	70.513	Poecilia_formosa
ENSSSCG00000039635	-	86	69.872	ENSPLAG00000019287	nhp2	100	69.872	Poecilia_latipinna
ENSSSCG00000039635	-	86	70.513	ENSPMEG00000024346	nhp2	100	70.513	Poecilia_mexicana
ENSSSCG00000039635	-	62	72.973	ENSPREG00000005005	nhp2	95	72.973	Poecilia_reticulata
ENSSSCG00000039635	-	86	92.810	ENSPPYG00000016105	NHP2	100	92.810	Pongo_abelii
ENSSSCG00000039635	-	86	94.118	ENSPCOG00000020708	NHP2	100	94.118	Propithecus_coquereli
ENSSSCG00000039635	-	86	92.157	ENSPVAG00000001647	NHP2	100	92.157	Pteropus_vampyrus
ENSSSCG00000039635	-	74	78.030	ENSPNYG00000022418	nhp2	100	71.429	Pundamilia_nyererei
ENSSSCG00000039635	-	86	72.549	ENSPNAG00000013779	nhp2	100	72.549	Pygocentrus_nattereri
ENSSSCG00000039635	-	61	91.667	ENSRNOG00000004247	Nhp2	89	91.667	Rattus_norvegicus
ENSSSCG00000039635	-	86	87.582	ENSRNOG00000049622	LOC103690013	100	87.582	Rattus_norvegicus
ENSSSCG00000039635	-	86	93.464	ENSRBIG00000018610	NHP2	100	93.464	Rhinopithecus_bieti
ENSSSCG00000039635	-	86	93.464	ENSRROG00000043373	NHP2	100	93.464	Rhinopithecus_roxellana
ENSSSCG00000039635	-	86	74.510	ENSRROG00000044295	-	100	74.510	Rhinopithecus_roxellana
ENSSSCG00000039635	-	66	51.562	YDL208W	-	82	51.562	Saccharomyces_cerevisiae
ENSSSCG00000039635	-	84	94.667	ENSSBOG00000027889	NHP2	98	94.667	Saimiri_boliviensis_boliviensis
ENSSSCG00000039635	-	86	76.623	ENSSHAG00000015581	NHP2	100	76.623	Sarcophilus_harrisii
ENSSSCG00000039635	-	86	73.203	ENSSFOG00015017061	nhp2	100	73.203	Scleropages_formosus
ENSSSCG00000039635	-	75	75.373	ENSSMAG00000011251	nhp2	100	69.872	Scophthalmus_maximus
ENSSSCG00000039635	-	86	71.242	ENSSDUG00000023355	nhp2	100	71.242	Seriola_dumerili
ENSSSCG00000039635	-	62	73.874	ENSSLDG00000006293	nhp2	53	71.304	Seriola_lalandi_dorsalis
ENSSSCG00000039635	-	75	86.466	ENSSPUG00000005173	NHP2	88	86.466	Sphenodon_punctatus
ENSSSCG00000039635	-	86	68.627	ENSSPAG00000011696	nhp2	100	68.627	Stegastes_partitus
ENSSSCG00000039635	-	56	75.758	ENSTGUG00000000368	NHP2	97	71.053	Taeniopygia_guttata
ENSSSCG00000039635	-	74	78.788	ENSTRUG00000008183	nhp2	100	71.698	Takifugu_rubripes
ENSSSCG00000039635	-	74	72.059	ENSTNIG00000004219	nhp2	99	65.644	Tetraodon_nigroviridis
ENSSSCG00000039635	-	86	97.386	ENSUAMG00000025154	NHP2	100	97.386	Ursus_americanus
ENSSSCG00000039635	-	85	92.715	ENSUMAG00000023916	NHP2	97	92.715	Ursus_maritimus
ENSSSCG00000039635	-	62	90.991	ENSVPAG00000010059	NHP2	100	90.991	Vicugna_pacos
ENSSSCG00000039635	-	86	82.222	ENSVVUG00000001030	NHP2	100	82.222	Vulpes_vulpes
ENSSSCG00000039635	-	74	80.916	ENSXETG00000006731	nhp2	88	80.916	Xenopus_tropicalis
ENSSSCG00000039635	-	75	78.195	ENSXMAG00000007031	nhp2	100	73.077	Xiphophorus_maculatus