EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000040023 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 189 bases
Position: chr10:42967443-42967631
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036665	Ribosomal_S30	PF04758.14	3.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000056098	-	189	-	ENSSSCP00000036665	62 (aa)	-	A0A286ZY72

Gene Model

Click here to download ENSSSCG00000040023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040023's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000040023	-	100	66.667	ENSSSCG00000033605	-	100	54.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040023	-	100	93.651	ENSG00000149806	FAU	64	85.714	Homo_sapiens
ENSSSCG00000040023	-	100	72.581	ENSBTAG00000049317	-	87	72.581	Bos_taurus
ENSSSCG00000040023	-	100	88.710	ENSBTAG00000053419	-	63	88.710	Bos_taurus
ENSSSCG00000040023	-	94	93.220	ENSCHIG00000017446	-	100	84.746	Capra_hircus
ENSSSCG00000040023	-	100	80.952	ENSCHIG00000013797	-	66	71.429	Capra_hircus
ENSSSCG00000040023	-	100	77.419	ENSTSYG00000034668	-	100	77.419	Carlito_syrichta
ENSSSCG00000040023	-	100	79.032	ENSTSYG00000034761	-	100	82.258	Carlito_syrichta
ENSSSCG00000040023	-	100	80.952	ENSTSYG00000034685	-	64	77.778	Carlito_syrichta
ENSSSCG00000040023	-	94	93.220	ENSCAPG00000007256	-	100	84.746	Cavia_aperea
ENSSSCG00000040023	-	100	89.062	ENSCANG00000015060	-	100	81.250	Colobus_angolensis_palliatus
ENSSSCG00000040023	-	100	82.540	ENSCGRG00001010571	-	100	73.016	Cricetulus_griseus_chok1gshd
ENSSSCG00000040023	-	100	82.540	ENSCGRG00000019363	-	100	73.016	Cricetulus_griseus_crigri
ENSSSCG00000040023	-	94	93.220	ENSDORG00000003616	-	100	84.746	Dipodomys_ordii
ENSSSCG00000040023	-	100	79.032	ENSEASG00005014582	-	66	79.032	Equus_asinus_asinus
ENSSSCG00000040023	-	100	77.419	ENSEASG00005002823	-	64	77.419	Equus_asinus_asinus
ENSSSCG00000040023	-	100	80.645	ENSECAG00000031753	-	66	80.645	Equus_caballus
ENSSSCG00000040023	-	100	75.806	ENSECAG00000016093	-	64	75.806	Equus_caballus
ENSSSCG00000040023	-	94	76.271	ENSFCAG00000037234	-	80	69.492	Felis_catus
ENSSSCG00000040023	-	100	56.452	ENSFCAG00000032304	-	61	56.452	Felis_catus
ENSSSCG00000040023	-	100	92.063	ENSFALG00000004541	-	58	84.127	Ficedula_albicollis
ENSSSCG00000040023	-	95	93.333	ENSGALG00000035506	FAU	66	85.000	Gallus_gallus
ENSSSCG00000040023	-	100	85.484	ENSGAGG00000025417	-	65	85.484	Gopherus_agassizii
ENSSSCG00000040023	-	95	90.000	ENSLOCG00000002253	-	88	80.952	Lepisosteus_oculatus
ENSSSCG00000040023	-	100	85.714	ENSLOCG00000014092	-	100	80.952	Lepisosteus_oculatus
ENSSSCG00000040023	-	100	69.412	MGP_SPRETEiJ_G0023497	-	55	63.529	Mus_spretus
ENSSSCG00000040023	-	100	82.540	ENSNGAG00000017099	-	100	76.190	Nannospalax_galili
ENSSSCG00000040023	-	100	77.941	ENSPPAG00000032835	-	100	77.941	Pan_paniscus
ENSSSCG00000040023	-	98	73.846	ENSPTIG00000000892	-	63	73.846	Panthera_tigris_altaica
ENSSSCG00000040023	-	94	93.103	ENSPEMG00000018179	-	85	93.103	Peromyscus_maniculatus_bairdii
ENSSSCG00000040023	-	100	93.651	ENSPCIG00000007715	-	64	85.714	Phascolarctos_cinereus
ENSSSCG00000040023	-	100	82.812	ENSPCIG00000002085	-	80	73.438	Phascolarctos_cinereus
ENSSSCG00000040023	-	94	87.931	ENSSBOG00000034795	-	62	87.931	Saimiri_boliviensis_boliviensis
ENSSSCG00000040023	-	100	84.848	ENSSBOG00000024235	-	51	83.333	Saimiri_boliviensis_boliviensis
ENSSSCG00000040023	-	90	77.193	ENSSLDG00000004039	-	90	68.421	Seriola_lalandi_dorsalis
ENSSSCG00000040023	-	95	93.333	ENSTGUG00000016898	-	100	85.000	Taeniopygia_guttata
ENSSSCG00000040023	-	94	74.138	ENSUAMG00000028348	-	100	74.138	Ursus_americanus
ENSSSCG00000040023	-	100	93.651	ENSUAMG00000017472	-	66	85.714	Ursus_americanus
ENSSSCG00000040023	-	94	75.862	ENSUMAG00000022021	-	100	75.862	Ursus_maritimus
ENSSSCG00000040023	-	98	85.246	ENSUMAG00000022340	-	56	85.246	Ursus_maritimus
ENSSSCG00000040023	-	100	90.476	ENSUMAG00000006180	-	66	82.540	Ursus_maritimus