EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000040086 (Gene tree)
Gene ID: 110257488
Gene Symbol: YTHDF1
Alias: C20orf21|FLJ20391
Full Name: YTH N6-methyladenosine RNA binding protein 1
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 12798 bases
Position: chr17:62328712-62341509
Accession: 110257488
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000038189	YTH	PF04146.15	3.8e-41	1	1
ENSSSCP00000031181	YTH	PF04146.15	5.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000049062	YTHDF1-201	4006	-	ENSSSCP00000031181	652 (aa)	-	A0A286ZI96
ENSSSCT00000066311	YTHDF1-202	3731	XM_021078235	ENSSSCP00000038189	558 (aa)	XP_020933894	A0A287A2P3

Gene Model

Click here to download ENSSSCG00000040086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040086	YTHDF1	100	88.929	ENSG00000149658	YTHDF1	100	88.929	Homo_sapiens
ENSSSCG00000040086	YTHDF1	100	72.014	ENSAPOG00000010796	YTHDF1	100	70.962	Acanthochromis_polyacanthus
ENSSSCG00000040086	YTHDF1	96	72.014	ENSAPOG00000004358	ythdf1	97	71.555	Acanthochromis_polyacanthus
ENSSSCG00000040086	YTHDF1	99	88.043	ENSAMEG00000017323	YTHDF1	99	91.547	Ailuropoda_melanoleuca
ENSSSCG00000040086	YTHDF1	100	73.868	ENSACIG00000020083	YTHDF1	100	73.171	Amphilophus_citrinellus
ENSSSCG00000040086	YTHDF1	96	70.125	ENSACIG00000011264	ythdf1	99	68.793	Amphilophus_citrinellus
ENSSSCG00000040086	YTHDF1	99	69.687	ENSAOCG00000022251	ythdf1	98	71.607	Amphiprion_ocellaris
ENSSSCG00000040086	YTHDF1	100	72.300	ENSAOCG00000012567	YTHDF1	100	72.125	Amphiprion_ocellaris
ENSSSCG00000040086	YTHDF1	100	72.474	ENSAPEG00000008750	YTHDF1	100	72.300	Amphiprion_percula
ENSSSCG00000040086	YTHDF1	96	72.043	ENSATEG00000023840	ythdf1	98	72.630	Anabas_testudineus
ENSSSCG00000040086	YTHDF1	100	72.997	ENSATEG00000005996	YTHDF1	100	72.474	Anabas_testudineus
ENSSSCG00000040086	YTHDF1	99	84.946	ENSAPLG00000005985	YTHDF1	99	85.018	Anas_platyrhynchos
ENSSSCG00000040086	YTHDF1	100	83.422	ENSACAG00000005560	YTHDF1	100	82.709	Anolis_carolinensis
ENSSSCG00000040086	YTHDF1	100	88.750	ENSANAG00000034786	-	100	88.571	Aotus_nancymaae
ENSSSCG00000040086	YTHDF1	100	75.893	ENSANAG00000021022	-	100	75.893	Aotus_nancymaae
ENSSSCG00000040086	YTHDF1	100	72.822	ENSACLG00000025518	YTHDF1	100	72.648	Astatotilapia_calliptera
ENSSSCG00000040086	YTHDF1	100	89.286	ENSBTAG00000010383	YTHDF1	100	87.143	Bos_taurus
ENSSSCG00000040086	YTHDF1	100	88.929	ENSCJAG00000010056	YTHDF1	100	88.929	Callithrix_jacchus
ENSSSCG00000040086	YTHDF1	91	89.784	ENSCAFG00000012772	YTHDF1	99	90.766	Canis_familiaris
ENSSSCG00000040086	YTHDF1	91	89.784	ENSCAFG00020001214	YTHDF1	99	90.766	Canis_lupus_dingo
ENSSSCG00000040086	YTHDF1	100	88.750	ENSCHIG00000026494	YTHDF1	100	86.429	Capra_hircus
ENSSSCG00000040086	YTHDF1	99	88.351	ENSTSYG00000033436	YTHDF1	100	88.151	Carlito_syrichta
ENSSSCG00000040086	YTHDF1	97	86.029	ENSCAPG00000002544	YTHDF1	93	86.029	Cavia_aperea
ENSSSCG00000040086	YTHDF1	100	87.857	ENSCPOG00000010202	YTHDF1	100	87.857	Cavia_porcellus
ENSSSCG00000040086	YTHDF1	100	89.464	ENSCCAG00000024650	YTHDF1	100	88.393	Cebus_capucinus
ENSSSCG00000040086	YTHDF1	100	89.464	ENSCATG00000033272	YTHDF1	100	89.464	Cercocebus_atys
ENSSSCG00000040086	YTHDF1	100	86.809	ENSCLAG00000005989	YTHDF1	100	87.166	Chinchilla_lanigera
ENSSSCG00000040086	YTHDF1	100	89.464	ENSCSAG00000016266	YTHDF1	100	89.464	Chlorocebus_sabaeus
ENSSSCG00000040086	YTHDF1	100	86.453	ENSCPBG00000027183	YTHDF1	100	85.179	Chrysemys_picta_bellii
ENSSSCG00000040086	YTHDF1	99	89.312	ENSCANG00000029082	YTHDF1	99	88.750	Colobus_angolensis_palliatus
ENSSSCG00000040086	YTHDF1	100	89.286	ENSCGRG00001016568	Ythdf1	100	88.929	Cricetulus_griseus_chok1gshd
ENSSSCG00000040086	YTHDF1	98	89.111	ENSCGRG00000009207	Ythdf1	100	88.748	Cricetulus_griseus_crigri
ENSSSCG00000040086	YTHDF1	96	71.636	ENSCSEG00000020623	YTHDF1	98	72.545	Cynoglossus_semilaevis
ENSSSCG00000040086	YTHDF1	99	69.110	ENSCVAG00000017940	ythdf1	97	70.144	Cyprinodon_variegatus
ENSSSCG00000040086	YTHDF1	97	72.183	ENSCVAG00000014378	YTHDF1	99	72.760	Cyprinodon_variegatus
ENSSSCG00000040086	YTHDF1	100	85.536	ENSDNOG00000043590	YTHDF1	100	85.893	Dasypus_novemcinctus
ENSSSCG00000040086	YTHDF1	97	83.610	ENSDORG00000002879	Ythdf1	94	86.924	Dipodomys_ordii
ENSSSCG00000040086	YTHDF1	79	64.286	ENSETEG00000017860	-	98	66.901	Echinops_telfairi
ENSSSCG00000040086	YTHDF1	100	90.893	ENSEASG00005023186	YTHDF1	100	90.357	Equus_asinus_asinus
ENSSSCG00000040086	YTHDF1	98	91.107	ENSECAG00000019475	YTHDF1	100	90.392	Equus_caballus
ENSSSCG00000040086	YTHDF1	92	89.922	ENSEEUG00000007461	YTHDF1	100	86.628	Erinaceus_europaeus
ENSSSCG00000040086	YTHDF1	94	72.978	ENSELUG00000001906	YTHDF1	99	73.048	Esox_lucius
ENSSSCG00000040086	YTHDF1	100	88.571	ENSFCAG00000008917	YTHDF1	100	92.500	Felis_catus
ENSSSCG00000040086	YTHDF1	100	86.988	ENSFALG00000010463	YTHDF1	100	85.893	Ficedula_albicollis
ENSSSCG00000040086	YTHDF1	100	89.247	ENSFDAG00000019602	YTHDF1	100	89.247	Fukomys_damarensis
ENSSSCG00000040086	YTHDF1	99	70.547	ENSFHEG00000023218	ythdf1	98	70.631	Fundulus_heteroclitus
ENSSSCG00000040086	YTHDF1	97	72.679	ENSFHEG00000002540	YTHDF1	99	72.939	Fundulus_heteroclitus
ENSSSCG00000040086	YTHDF1	86	87.817	ENSGMOG00000019610	ythdf1	77	89.560	Gadus_morhua
ENSSSCG00000040086	YTHDF1	100	85.409	ENSGALG00000005745	YTHDF1	100	85.053	Gallus_gallus
ENSSSCG00000040086	YTHDF1	100	69.094	ENSGAFG00000021100	YTHDF1	99	71.735	Gambusia_affinis
ENSSSCG00000040086	YTHDF1	100	86.453	ENSGAGG00000003007	YTHDF1	100	85.179	Gopherus_agassizii
ENSSSCG00000040086	YTHDF1	100	89.286	ENSGGOG00000008340	YTHDF1	100	89.286	Gorilla_gorilla
ENSSSCG00000040086	YTHDF1	96	69.947	ENSHBUG00000011284	ythdf1	98	70.157	Haplochromis_burtoni
ENSSSCG00000040086	YTHDF1	100	72.648	ENSHBUG00000004875	YTHDF1	100	72.474	Haplochromis_burtoni
ENSSSCG00000040086	YTHDF1	100	89.068	ENSHGLG00000006585	YTHDF1	100	89.068	Heterocephalus_glaber_female
ENSSSCG00000040086	YTHDF1	100	89.068	ENSHGLG00100004683	YTHDF1	100	89.068	Heterocephalus_glaber_male
ENSSSCG00000040086	YTHDF1	100	69.194	ENSHCOG00000011303	YTHDF1	100	72.037	Hippocampus_comes
ENSSSCG00000040086	YTHDF1	97	75.956	ENSIPUG00000000425	Ythdf1	98	75.046	Ictalurus_punctatus
ENSSSCG00000040086	YTHDF1	99	87.862	ENSSTOG00000023001	YTHDF1	99	84.964	Ictidomys_tridecemlineatus
ENSSSCG00000040086	YTHDF1	98	89.837	ENSJJAG00000013589	Ythdf1	100	88.748	Jaculus_jaculus
ENSSSCG00000040086	YTHDF1	97	71.479	ENSKMAG00000017472	YTHDF1	99	72.987	Kryptolebias_marmoratus
ENSSSCG00000040086	YTHDF1	96	69.449	ENSKMAG00000005595	ythdf1	98	69.910	Kryptolebias_marmoratus
ENSSSCG00000040086	YTHDF1	100	71.599	ENSLBEG00000012068	YTHDF1	100	71.478	Labrus_bergylta
ENSSSCG00000040086	YTHDF1	96	70.504	ENSLBEG00000014105	ythdf1	94	71.583	Labrus_bergylta
ENSSSCG00000040086	YTHDF1	96	80.550	ENSLACG00000014195	YTHDF1	96	79.026	Latimeria_chalumnae
ENSSSCG00000040086	YTHDF1	100	75.773	ENSLOCG00000005020	ythdf1	95	75.862	Lepisosteus_oculatus
ENSSSCG00000040086	YTHDF1	100	88.214	ENSLAFG00000008884	YTHDF1	100	87.857	Loxodonta_africana
ENSSSCG00000040086	YTHDF1	100	89.464	ENSMFAG00000042868	YTHDF1	100	89.464	Macaca_fascicularis
ENSSSCG00000040086	YTHDF1	100	89.464	ENSMMUG00000009227	YTHDF1	100	89.464	Macaca_mulatta
ENSSSCG00000040086	YTHDF1	100	89.464	ENSMNEG00000030851	YTHDF1	100	89.464	Macaca_nemestrina
ENSSSCG00000040086	YTHDF1	98	89.474	ENSMLEG00000009252	YTHDF1	100	89.474	Mandrillus_leucophaeus
ENSSSCG00000040086	YTHDF1	100	72.743	ENSMAMG00000011072	YTHDF1	100	72.474	Mastacembelus_armatus
ENSSSCG00000040086	YTHDF1	96	70.863	ENSMAMG00000024255	ythdf1	97	70.370	Mastacembelus_armatus
ENSSSCG00000040086	YTHDF1	100	72.648	ENSMZEG00005023596	YTHDF1	100	72.474	Maylandia_zebra
ENSSSCG00000040086	YTHDF1	96	71.071	ENSMZEG00005026397	ythdf1	98	71.277	Maylandia_zebra
ENSSSCG00000040086	YTHDF1	99	84.464	ENSMGAG00000006139	YTHDF1	99	84.838	Meleagris_gallopavo
ENSSSCG00000040086	YTHDF1	100	88.929	ENSMAUG00000017660	Ythdf1	100	88.571	Mesocricetus_auratus
ENSSSCG00000040086	YTHDF1	100	89.643	ENSMICG00000032266	YTHDF1	100	88.750	Microcebus_murinus
ENSSSCG00000040086	YTHDF1	100	88.750	ENSMOCG00000013573	Ythdf1	100	88.393	Microtus_ochrogaster
ENSSSCG00000040086	YTHDF1	91	85.352	ENSMODG00000016842	YTHDF1	100	85.156	Monodelphis_domestica
ENSSSCG00000040086	YTHDF1	96	71.607	ENSMALG00000015672	ythdf1	96	70.567	Monopterus_albus
ENSSSCG00000040086	YTHDF1	100	71.331	ENSMALG00000022209	YTHDF1	100	72.300	Monopterus_albus
ENSSSCG00000040086	YTHDF1	100	89.286	MGP_CAROLIEiJ_G0024790	Ythdf1	100	88.929	Mus_caroli
ENSSSCG00000040086	YTHDF1	100	89.286	ENSMUSG00000038848	Ythdf1	100	88.929	Mus_musculus
ENSSSCG00000040086	YTHDF1	100	88.929	MGP_PahariEiJ_G0026237	Ythdf1	100	88.571	Mus_pahari
ENSSSCG00000040086	YTHDF1	100	89.286	MGP_SPRETEiJ_G0025715	Ythdf1	100	88.929	Mus_spretus
ENSSSCG00000040086	YTHDF1	91	88.976	ENSMPUG00000008111	YTHDF1	100	88.976	Mustela_putorius_furo
ENSSSCG00000040086	YTHDF1	97	90.239	ENSMLUG00000002241	YTHDF1	96	89.503	Myotis_lucifugus
ENSSSCG00000040086	YTHDF1	100	89.464	ENSNGAG00000000334	Ythdf1	100	89.107	Nannospalax_galili
ENSSSCG00000040086	YTHDF1	99	69.085	ENSNBRG00000008213	ythdf1	96	70.232	Neolamprologus_brichardi
ENSSSCG00000040086	YTHDF1	100	72.648	ENSNBRG00000015321	YTHDF1	100	72.474	Neolamprologus_brichardi
ENSSSCG00000040086	YTHDF1	95	79.323	ENSOPRG00000001758	-	99	78.203	Ochotona_princeps
ENSSSCG00000040086	YTHDF1	100	86.453	ENSODEG00000004380	-	100	86.809	Octodon_degus
ENSSSCG00000040086	YTHDF1	96	71.534	ENSODEG00000000074	-	100	71.327	Octodon_degus
ENSSSCG00000040086	YTHDF1	100	85.943	ENSOANG00000003723	YTHDF1	100	85.765	Ornithorhynchus_anatinus
ENSSSCG00000040086	YTHDF1	100	80.570	ENSOCUG00000012780	YTHDF1	100	80.214	Oryctolagus_cuniculus
ENSSSCG00000040086	YTHDF1	97	72.760	ENSORLG00000009739	YTHDF1	99	72.172	Oryzias_latipes
ENSSSCG00000040086	YTHDF1	97	73.381	ENSORLG00020001332	YTHDF1	99	73.091	Oryzias_latipes_hni
ENSSSCG00000040086	YTHDF1	100	69.652	ENSORLG00015018321	YTHDF1	99	71.813	Oryzias_latipes_hsok
ENSSSCG00000040086	YTHDF1	96	70.939	ENSOMEG00000002941	YTHDF1	98	70.683	Oryzias_melastigma
ENSSSCG00000040086	YTHDF1	100	88.393	ENSOGAG00000000480	YTHDF1	100	87.500	Otolemur_garnettii
ENSSSCG00000040086	YTHDF1	99	86.051	ENSOARG00000011639	YTHDF1	98	83.455	Ovis_aries
ENSSSCG00000040086	YTHDF1	99	89.312	ENSPPAG00000023277	YTHDF1	100	89.312	Pan_paniscus
ENSSSCG00000040086	YTHDF1	100	87.857	ENSPPRG00000020805	YTHDF1	100	91.786	Panthera_pardus
ENSSSCG00000040086	YTHDF1	99	80.909	ENSPTIG00000017355	YTHDF1	95	93.927	Panthera_tigris_altaica
ENSSSCG00000040086	YTHDF1	100	89.286	ENSPTRG00000013730	YTHDF1	100	89.286	Pan_troglodytes
ENSSSCG00000040086	YTHDF1	100	89.464	ENSPANG00000021472	YTHDF1	100	89.464	Papio_anubis
ENSSSCG00000040086	YTHDF1	100	70.826	ENSPKIG00000005427	ythdf1	100	71.002	Paramormyrops_kingsleyae
ENSSSCG00000040086	YTHDF1	97	85.558	ENSPSIG00000005529	YTHDF1	96	84.944	Pelodiscus_sinensis
ENSSSCG00000040086	YTHDF1	98	89.111	ENSPEMG00000020199	Ythdf1	100	88.748	Peromyscus_maniculatus_bairdii
ENSSSCG00000040086	YTHDF1	99	85.586	ENSPCIG00000017170	YTHDF1	100	85.156	Phascolarctos_cinereus
ENSSSCG00000040086	YTHDF1	99	71.731	ENSPLAG00000006653	ythdf1	98	71.763	Poecilia_latipinna
ENSSSCG00000040086	YTHDF1	99	70.848	ENSPMEG00000023753	ythdf1	98	71.275	Poecilia_mexicana
ENSSSCG00000040086	YTHDF1	100	69.640	ENSPMEG00000020969	-	100	71.204	Poecilia_mexicana
ENSSSCG00000040086	YTHDF1	99	70.796	ENSPREG00000002173	ythdf1	98	71.942	Poecilia_reticulata
ENSSSCG00000040086	YTHDF1	85	94.527	ENSPPYG00000011226	YTHDF1	99	94.472	Pongo_abelii
ENSSSCG00000040086	YTHDF1	89	85.915	ENSPCAG00000002452	YTHDF1	98	85.230	Procavia_capensis
ENSSSCG00000040086	YTHDF1	100	89.821	ENSPCOG00000025969	YTHDF1	100	88.929	Propithecus_coquereli
ENSSSCG00000040086	YTHDF1	98	83.060	ENSPVAG00000017568	YTHDF1	98	81.481	Pteropus_vampyrus
ENSSSCG00000040086	YTHDF1	100	72.648	ENSPNYG00000002266	YTHDF1	100	72.474	Pundamilia_nyererei
ENSSSCG00000040086	YTHDF1	96	71.071	ENSPNYG00000014007	ythdf1	98	71.277	Pundamilia_nyererei
ENSSSCG00000040086	YTHDF1	100	89.107	ENSRNOG00000027015	Ythdf1	100	88.750	Rattus_norvegicus
ENSSSCG00000040086	YTHDF1	100	88.929	ENSRBIG00000044959	YTHDF1	100	88.929	Rhinopithecus_bieti
ENSSSCG00000040086	YTHDF1	100	88.750	ENSRROG00000033014	YTHDF1	100	88.750	Rhinopithecus_roxellana
ENSSSCG00000040086	YTHDF1	97	88.214	ENSSBOG00000027278	YTHDF1	100	88.039	Saimiri_boliviensis_boliviensis
ENSSSCG00000040086	YTHDF1	99	85.152	ENSSHAG00000010430	YTHDF1	91	83.916	Sarcophilus_harrisii
ENSSSCG00000040086	YTHDF1	100	71.791	ENSSFOG00015000284	ythdf1	100	70.558	Scleropages_formosus
ENSSSCG00000040086	YTHDF1	72	83.444	ENSSMAG00000013715	ythdf1	85	78.414	Scophthalmus_maximus
ENSSSCG00000040086	YTHDF1	97	77.912	ENSSMAG00000007635	YTHDF1	78	79.736	Scophthalmus_maximus
ENSSSCG00000040086	YTHDF1	96	72.321	ENSSDUG00000000435	ythdf1	96	71.809	Seriola_dumerili
ENSSSCG00000040086	YTHDF1	99	72.174	ENSSDUG00000015823	YTHDF1	99	73.016	Seriola_dumerili
ENSSSCG00000040086	YTHDF1	91	84.344	ENSSPUG00000015143	YTHDF1	100	82.779	Sphenodon_punctatus
ENSSSCG00000040086	YTHDF1	100	71.330	ENSSPAG00000003666	YTHDF1	100	71.157	Stegastes_partitus
ENSSSCG00000040086	YTHDF1	99	85.379	ENSTGUG00000007565	YTHDF1	100	85.018	Taeniopygia_guttata
ENSSSCG00000040086	YTHDF1	99	71.908	ENSTNIG00000012490	ythdf1	99	72.007	Tetraodon_nigroviridis
ENSSSCG00000040086	YTHDF1	100	72.105	ENSTNIG00000003975	YTHDF1	100	71.053	Tetraodon_nigroviridis
ENSSSCG00000040086	YTHDF1	99	85.895	ENSTTRG00000001804	YTHDF1	98	86.581	Tursiops_truncatus
ENSSSCG00000040086	YTHDF1	97	87.661	ENSUAMG00000011021	YTHDF1	100	91.373	Ursus_americanus
ENSSSCG00000040086	YTHDF1	91	87.255	ENSUMAG00000022290	YTHDF1	100	91.373	Ursus_maritimus
ENSSSCG00000040086	YTHDF1	91	89.980	ENSVVUG00000015275	YTHDF1	99	90.963	Vulpes_vulpes
ENSSSCG00000040086	YTHDF1	97	80.036	ENSXETG00000027086	ythdf1	96	79.006	Xenopus_tropicalis
ENSSSCG00000040086	YTHDF1	96	71.168	ENSXCOG00000002490	ythdf1	93	72.356	Xiphophorus_couchianus
ENSSSCG00000040086	YTHDF1	97	72.663	ENSXMAG00000015644	YTHDF1	99	73.477	Xiphophorus_maculatus
ENSSSCG00000040086	YTHDF1	100	67.731	ENSXMAG00000008525	ythdf1	94	71.933	Xiphophorus_maculatus