EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000040225 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 7906 bases
Position: chr18:48488476-48496381
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000035981	tRNA-synt_2c	PF01411.19	5.8e-47	1	1
ENSSSCP00000036330	tRNA-synt_2c	PF01411.19	2.1e-46	1	1
ENSSSCP00000035981	DHHA1	PF02272.19	1.2e-06	1	1
ENSSSCP00000036330	DHHA1	PF02272.19	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000050947	-	2367	-	ENSSSCP00000035981	788 (aa)	-	A0A286ZWU5
ENSSSCT00000059245	-	2313	-	ENSSSCP00000036330	770 (aa)	-	A0A286ZXI5

Gene Model

Click here to download ENSSSCG00000040225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000040225	-	100	53.446	ENSSSCG00000002723	-	99	51.449
ENSSSCG00000040225	-	97	30.306	ENSSSCG00000001706	AARS2	91	30.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040225	-	100	53.340	ENSG00000090861	AARS	99	51.035	Homo_sapiens
ENSSSCG00000040225	-	99	45.455	ENSAPOG00000022413	aars	96	45.455	Acanthochromis_polyacanthus
ENSSSCG00000040225	-	100	54.083	ENSAMEG00000004815	AARS	99	51.760	Ailuropoda_melanoleuca
ENSSSCG00000040225	-	99	45.445	ENSACIG00000016586	aars	96	45.445	Amphilophus_citrinellus
ENSSSCG00000040225	-	99	45.455	ENSAOCG00000007036	aars	98	43.487	Amphiprion_ocellaris
ENSSSCG00000040225	-	99	45.348	ENSAPEG00000022892	aars	98	43.487	Amphiprion_percula
ENSSSCG00000040225	-	99	45.048	ENSATEG00000013826	aars	96	45.048	Anabas_testudineus
ENSSSCG00000040225	-	79	53.333	ENSAPLG00000008519	AARS	82	53.333	Anas_platyrhynchos
ENSSSCG00000040225	-	100	49.255	ENSACAG00000002808	AARS	99	46.521	Anolis_carolinensis
ENSSSCG00000040225	-	100	49.290	ENSANAG00000029082	AARS	90	63.429	Aotus_nancymaae
ENSSSCG00000040225	-	99	45.561	ENSACLG00000022314	aars	96	45.561	Astatotilapia_calliptera
ENSSSCG00000040225	-	99	46.788	ENSAMXG00000003368	aars	96	46.788	Astyanax_mexicanus
ENSSSCG00000040225	-	100	53.994	ENSBTAG00000019810	AARS	99	51.543	Bos_taurus
ENSSSCG00000040225	-	99	34.523	WBGene00000197	aars-2	96	34.523	Caenorhabditis_elegans
ENSSSCG00000040225	-	100	52.916	ENSCJAG00000014562	AARS	94	69.079	Callithrix_jacchus
ENSSSCG00000040225	-	100	53.552	ENSCAFG00000020132	AARS	99	51.139	Canis_familiaris
ENSSSCG00000040225	-	100	53.552	ENSCAFG00020020967	AARS	99	51.139	Canis_lupus_dingo
ENSSSCG00000040225	-	100	53.568	ENSCHIG00000015632	AARS	99	51.235	Capra_hircus
ENSSSCG00000040225	-	100	54.378	ENSTSYG00000010987	AARS	93	69.079	Carlito_syrichta
ENSSSCG00000040225	-	85	55.668	ENSCAPG00000013564	AARS	90	55.668	Cavia_aperea
ENSSSCG00000040225	-	100	53.659	ENSCPOG00000002373	AARS	96	53.659	Cavia_porcellus
ENSSSCG00000040225	-	100	52.916	ENSCCAG00000001818	AARS	85	68.421	Cebus_capucinus
ENSSSCG00000040225	-	100	53.446	ENSCATG00000032821	AARS	93	69.737	Cercocebus_atys
ENSSSCG00000040225	-	100	53.035	ENSCLAG00000004366	AARS	96	53.035	Chinchilla_lanigera
ENSSSCG00000040225	-	100	53.446	ENSCSAG00000004476	AARS	99	51.139	Chlorocebus_sabaeus
ENSSSCG00000040225	-	50	72.222	ENSCHOG00000000347	-	52	72.222	Choloepus_hoffmanni
ENSSSCG00000040225	-	100	48.250	ENSCPBG00000002995	AARS	96	48.250	Chrysemys_picta_bellii
ENSSSCG00000040225	-	99	35.011	ENSCING00000024107	-	96	35.011	Ciona_intestinalis
ENSSSCG00000040225	-	100	35.288	ENSCSAVG00000000721	-	96	35.294	Ciona_savignyi
ENSSSCG00000040225	-	100	52.620	ENSCANG00000040257	AARS	93	69.079	Colobus_angolensis_palliatus
ENSSSCG00000040225	-	100	53.617	ENSCGRG00001014390	AARS	96	53.617	Cricetulus_griseus_chok1gshd
ENSSSCG00000040225	-	100	53.617	ENSCGRG00000017420	AARS	96	53.617	Cricetulus_griseus_crigri
ENSSSCG00000040225	-	99	45.406	ENSCSEG00000014258	aars	96	45.406	Cynoglossus_semilaevis
ENSSSCG00000040225	-	84	46.018	ENSCVAG00000000882	aars	99	46.018	Cyprinodon_variegatus
ENSSSCG00000040225	-	99	46.738	ENSDARG00000069142	aars	96	46.738	Danio_rerio
ENSSSCG00000040225	-	100	50.686	ENSDNOG00000004586	AARS	99	48.041	Dasypus_novemcinctus
ENSSSCG00000040225	-	100	53.659	ENSDORG00000004110	Aars	98	51.667	Dipodomys_ordii
ENSSSCG00000040225	-	99	34.395	FBgn0027094	AlaRS	96	34.395	Drosophila_melanogaster
ENSSSCG00000040225	-	95	55.485	ENSETEG00000002451	AARS	89	55.485	Echinops_telfairi
ENSSSCG00000040225	-	99	41.578	ENSEBUG00000004521	aars	98	42.024	Eptatretus_burgeri
ENSSSCG00000040225	-	100	54.083	ENSEASG00005013408	AARS	90	51.967	Equus_asinus_asinus
ENSSSCG00000040225	-	100	54.295	ENSECAG00000008561	AARS	92	54.295	Equus_caballus
ENSSSCG00000040225	-	94	55.140	ENSEEUG00000006335	AARS	88	55.140	Erinaceus_europaeus
ENSSSCG00000040225	-	99	46.524	ENSELUG00000015496	aars	96	46.524	Esox_lucius
ENSSSCG00000040225	-	100	54.189	ENSFCAG00000009482	AARS	99	51.967	Felis_catus
ENSSSCG00000040225	-	100	49.734	ENSFALG00000007196	AARS	99	46.985	Ficedula_albicollis
ENSSSCG00000040225	-	100	53.674	ENSFDAG00000011896	AARS	99	50.723	Fukomys_damarensis
ENSSSCG00000040225	-	55	42.804	ENSFHEG00000004067	aars	90	42.754	Fundulus_heteroclitus
ENSSSCG00000040225	-	99	44.794	ENSGMOG00000008147	aars	96	44.794	Gadus_morhua
ENSSSCG00000040225	-	100	49.149	ENSGALG00000001965	AARS	99	46.417	Gallus_gallus
ENSSSCG00000040225	-	99	45.522	ENSGAFG00000015182	aars	98	43.547	Gambusia_affinis
ENSSSCG00000040225	-	99	44.625	ENSGACG00000002667	aars	96	44.843	Gasterosteus_aculeatus
ENSSSCG00000040225	-	100	47.826	ENSGAGG00000014004	AARS	96	47.826	Gopherus_agassizii
ENSSSCG00000040225	-	100	47.845	ENSGGOG00000008737	AARS	93	69.079	Gorilla_gorilla
ENSSSCG00000040225	-	99	45.717	ENSHBUG00000011211	aars	96	45.717	Haplochromis_burtoni
ENSSSCG00000040225	-	100	53.142	ENSHGLG00000011756	AARS	96	53.142	Heterocephalus_glaber_female
ENSSSCG00000040225	-	100	53.035	ENSHGLG00100011337	AARS	96	53.035	Heterocephalus_glaber_male
ENSSSCG00000040225	-	99	43.743	ENSHCOG00000012089	aars	98	41.912	Hippocampus_comes
ENSSSCG00000040225	-	99	45.989	ENSIPUG00000020538	aars	96	45.989	Ictalurus_punctatus
ENSSSCG00000040225	-	100	53.659	ENSSTOG00000006856	AARS	96	53.659	Ictidomys_tridecemlineatus
ENSSSCG00000040225	-	100	53.284	ENSJJAG00000008731	Aars	96	53.284	Jaculus_jaculus
ENSSSCG00000040225	-	99	45.027	ENSKMAG00000009832	aars	96	45.027	Kryptolebias_marmoratus
ENSSSCG00000040225	-	99	44.765	ENSLBEG00000018551	aars	96	44.765	Labrus_bergylta
ENSSSCG00000040225	-	100	45.580	ENSLACG00000004892	AARS	99	42.931	Latimeria_chalumnae
ENSSSCG00000040225	-	100	52.807	ENSLAFG00000006645	AARS	99	50.355	Loxodonta_africana
ENSSSCG00000040225	-	100	53.340	ENSMFAG00000002309	AARS	87	69.737	Macaca_fascicularis
ENSSSCG00000040225	-	100	53.234	ENSMMUG00000021653	AARS	93	69.737	Macaca_mulatta
ENSSSCG00000040225	-	100	52.000	ENSMNEG00000014902	AARS	87	69.737	Macaca_nemestrina
ENSSSCG00000040225	-	96	53.691	ENSMLEG00000035037	AARS	98	53.691	Mandrillus_leucophaeus
ENSSSCG00000040225	-	99	45.348	ENSMAMG00000016945	aars	98	43.592	Mastacembelus_armatus
ENSSSCG00000040225	-	99	45.561	ENSMZEG00005010733	aars	96	45.561	Maylandia_zebra
ENSSSCG00000040225	-	100	49.149	ENSMGAG00000002038	AARS	96	49.149	Meleagris_gallopavo
ENSSSCG00000040225	-	100	53.284	ENSMAUG00000021342	Aars	96	53.284	Mesocricetus_auratus
ENSSSCG00000040225	-	100	53.228	ENSMICG00000000255	AARS	93	69.737	Microcebus_murinus
ENSSSCG00000040225	-	100	53.298	ENSMOCG00000005336	Aars	96	53.298	Microtus_ochrogaster
ENSSSCG00000040225	-	99	44.670	ENSMMOG00000002584	aars	98	42.723	Mola_mola
ENSSSCG00000040225	-	100	49.582	ENSMODG00000014518	AARS	96	49.582	Monodelphis_domestica
ENSSSCG00000040225	-	99	45.144	ENSMALG00000007912	aars	96	45.144	Monopterus_albus
ENSSSCG00000040225	-	100	53.234	ENSMUSG00000031960	Aars	96	53.234	Mus_musculus
ENSSSCG00000040225	-	100	53.765	ENSMPUG00000010060	AARS	99	51.346	Mustela_putorius_furo
ENSSSCG00000040225	-	100	53.871	ENSMLUG00000007431	AARS	99	51.449	Myotis_lucifugus
ENSSSCG00000040225	-	100	53.072	ENSNGAG00000003676	Aars	96	53.072	Nannospalax_galili
ENSSSCG00000040225	-	99	45.668	ENSNBRG00000007321	aars	96	45.668	Neolamprologus_brichardi
ENSSSCG00000040225	-	92	44.406	ENSMEUG00000016034	-	96	44.406	Notamacropus_eugenii
ENSSSCG00000040225	-	57	48.440	ENSMEUG00000006934	-	96	48.440	Notamacropus_eugenii
ENSSSCG00000040225	-	100	52.345	ENSOPRG00000003373	AARS	99	49.691	Ochotona_princeps
ENSSSCG00000040225	-	100	51.416	ENSODEG00000014435	-	96	51.416	Octodon_degus
ENSSSCG00000040225	-	88	47.111	ENSODEG00000014606	-	64	47.111	Octodon_degus
ENSSSCG00000040225	-	99	45.882	ENSONIG00000011185	aars	98	44.013	Oreochromis_niloticus
ENSSSCG00000040225	-	100	51.750	ENSOANG00000001157	AARS	99	49.172	Ornithorhynchus_anatinus
ENSSSCG00000040225	-	100	52.133	ENSOCUG00000008872	AARS	99	49.496	Oryctolagus_cuniculus
ENSSSCG00000040225	-	99	45.134	ENSORLG00000013398	aars	96	45.134	Oryzias_latipes
ENSSSCG00000040225	-	99	45.192	ENSORLG00020017581	aars	96	45.192	Oryzias_latipes_hni
ENSSSCG00000040225	-	99	45.192	ENSORLG00015007783	aars	96	45.192	Oryzias_latipes_hsok
ENSSSCG00000040225	-	99	45.144	ENSOMEG00000014361	aars	96	45.144	Oryzias_melastigma
ENSSSCG00000040225	-	100	52.704	ENSOGAG00000011601	AARS	99	50.518	Otolemur_garnettii
ENSSSCG00000040225	-	100	53.674	ENSOARG00000005286	AARS	99	51.337	Ovis_aries
ENSSSCG00000040225	-	100	53.234	ENSPPAG00000040404	AARS	93	68.421	Pan_paniscus
ENSSSCG00000040225	-	100	54.189	ENSPPRG00000013214	AARS	99	51.967	Panthera_pardus
ENSSSCG00000040225	-	100	54.083	ENSPTIG00000021477	AARS	99	51.863	Panthera_tigris_altaica
ENSSSCG00000040225	-	100	53.234	ENSPTRG00000008297	AARS	93	68.421	Pan_troglodytes
ENSSSCG00000040225	-	100	53.340	ENSPANG00000020452	AARS	86	69.737	Papio_anubis
ENSSSCG00000040225	-	99	46.096	ENSPKIG00000002593	aars	98	44.118	Paramormyrops_kingsleyae
ENSSSCG00000040225	-	100	47.396	ENSPSIG00000012820	AARS	96	47.396	Pelodiscus_sinensis
ENSSSCG00000040225	-	99	44.599	ENSPMGG00000016971	aars	98	42.647	Periophthalmus_magnuspinnatus
ENSSSCG00000040225	-	100	53.072	ENSPEMG00000010864	Aars	96	53.072	Peromyscus_maniculatus_bairdii
ENSSSCG00000040225	-	99	39.615	ENSPMAG00000001946	aars	96	39.722	Petromyzon_marinus
ENSSSCG00000040225	-	100	50.371	ENSPCIG00000010681	AARS	96	50.371	Phascolarctos_cinereus
ENSSSCG00000040225	-	99	45.406	ENSPFOG00000015763	aars	96	45.406	Poecilia_formosa
ENSSSCG00000040225	-	99	45.299	ENSPLAG00000014226	aars	96	45.299	Poecilia_latipinna
ENSSSCG00000040225	-	99	45.513	ENSPMEG00000019736	aars	96	45.513	Poecilia_mexicana
ENSSSCG00000040225	-	99	45.610	ENSPREG00000019562	aars	98	43.638	Poecilia_reticulata
ENSSSCG00000040225	-	73	62.931	ENSPPYG00000007544	-	72	62.931	Pongo_abelii
ENSSSCG00000040225	-	78	71.429	ENSPCAG00000012883	AARS	75	71.429	Procavia_capensis
ENSSSCG00000040225	-	100	53.072	ENSPCOG00000016630	AARS	93	69.079	Propithecus_coquereli
ENSSSCG00000040225	-	100	53.871	ENSPVAG00000000669	AARS	99	51.553	Pteropus_vampyrus
ENSSSCG00000040225	-	99	45.561	ENSPNYG00000010796	aars	96	45.561	Pundamilia_nyererei
ENSSSCG00000040225	-	99	46.524	ENSPNAG00000015269	aars	89	46.524	Pygocentrus_nattereri
ENSSSCG00000040225	-	100	52.704	ENSRNOG00000018404	Aars	96	52.704	Rattus_norvegicus
ENSSSCG00000040225	-	100	53.340	ENSRBIG00000032650	AARS	93	69.737	Rhinopithecus_bieti
ENSSSCG00000040225	-	100	53.659	ENSRROG00000027324	AARS	93	69.737	Rhinopithecus_roxellana
ENSSSCG00000040225	-	99	31.459	YOR335C	ALA1	96	31.459	Saccharomyces_cerevisiae
ENSSSCG00000040225	-	100	52.916	ENSSBOG00000022141	AARS	94	68.421	Saimiri_boliviensis_boliviensis
ENSSSCG00000040225	-	100	50.795	ENSSHAG00000007347	AARS	99	48.344	Sarcophilus_harrisii
ENSSSCG00000040225	-	99	44.865	ENSSFOG00015013147	aars	96	44.865	Scleropages_formosus
ENSSSCG00000040225	-	99	46.253	ENSSFOG00015011897	AARS	96	46.253	Scleropages_formosus
ENSSSCG00000040225	-	99	44.706	ENSSMAG00000014488	aars	98	42.752	Scophthalmus_maximus
ENSSSCG00000040225	-	99	45.348	ENSSDUG00000021127	aars	96	45.348	Seriola_dumerili
ENSSSCG00000040225	-	99	45.561	ENSSLDG00000017716	aars	96	45.561	Seriola_lalandi_dorsalis
ENSSSCG00000040225	-	51	72.222	ENSSARG00000006382	-	68	72.222	Sorex_araneus
ENSSSCG00000040225	-	100	48.243	ENSSPUG00000001911	AARS	99	46.050	Sphenodon_punctatus
ENSSSCG00000040225	-	99	45.775	ENSSPAG00000001290	aars	98	43.803	Stegastes_partitus
ENSSSCG00000040225	-	100	49.468	ENSTGUG00000005683	AARS	99	46.833	Taeniopygia_guttata
ENSSSCG00000040225	-	89	44.194	ENSTRUG00000000907	aars	96	44.019	Takifugu_rubripes
ENSSSCG00000040225	-	99	44.338	ENSTNIG00000004016	aars	98	42.497	Tetraodon_nigroviridis
ENSSSCG00000040225	-	97	43.743	ENSTBEG00000017122	-	99	43.743	Tupaia_belangeri
ENSSSCG00000040225	-	100	53.871	ENSUAMG00000007008	AARS	99	51.553	Ursus_americanus
ENSSSCG00000040225	-	100	53.977	ENSUMAG00000016975	AARS	99	51.656	Ursus_maritimus
ENSSSCG00000040225	-	71	69.167	ENSVPAG00000003189	AARS	70	69.167	Vicugna_pacos
ENSSSCG00000040225	-	100	53.552	ENSVVUG00000018036	AARS	99	51.139	Vulpes_vulpes
ENSSSCG00000040225	-	100	46.965	ENSXETG00000007668	aars	96	46.965	Xenopus_tropicalis
ENSSSCG00000040225	-	99	45.299	ENSXCOG00000013625	aars	98	43.337	Xiphophorus_couchianus
ENSSSCG00000040225	-	99	45.406	ENSXMAG00000006282	aars	98	43.442	Xiphophorus_maculatus