EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000040389 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 345-like
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 7517 bases
Position: chr6:56777238-56784754
Accession: 110261286
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	1	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	2	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	3	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	4	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	5	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	6	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	7	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	8	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	9	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	10	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	11	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	12	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	13	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	14	15
ENSSSCP00000055902	zf-C2H2	PF00096.26	3.2e-86	15	15
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	1	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	2	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	3	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	4	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	5	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	6	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	7	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	8	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	9	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	10	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	11	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	12	13
ENSSSCP00000034929	zf-C2H2	PF00096.26	1.6e-77	13	13
ENSSSCP00000055902	zf-met	PF12874.7	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000063299	-	1503	XM_021097243	ENSSSCP00000055902	500 (aa)	XP_020952902	A0A287BH91
ENSSSCT00000056931	-	1629	-	ENSSSCP00000034929	542 (aa)	-	A0A286ZU01

Gene Model

Click here to download ENSSSCG00000040389's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040389's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000040389	-	99	58.661	ENSSSCG00000008117	ZNF2	98	58.723
ENSSSCG00000040389	-	100	57.364	ENSSSCG00000035876	ZNF599	100	57.364
ENSSSCG00000040389	-	98	55.243	ENSSSCG00000022434	ZNF235	99	55.243
ENSSSCG00000040389	-	98	51.748	ENSSSCG00000022634	-	94	51.748
ENSSSCG00000040389	-	99	55.556	ENSSSCG00000022668	ZFP1	99	48.052
ENSSSCG00000040389	-	99	48.734	ENSSSCG00000036608	-	99	46.988
ENSSSCG00000040389	-	87	37.859	ENSSSCG00000025343	ZNF628	61	50.515
ENSSSCG00000040389	-	77	53.650	ENSSSCG00000023349	ZNF768	65	51.786
ENSSSCG00000040389	-	99	60.481	ENSSSCG00000003322	-	94	60.481
ENSSSCG00000040389	-	98	55.932	ENSSSCG00000012283	ZNF81	96	56.419
ENSSSCG00000040389	-	74	52.697	ENSSSCG00000029696	-	99	53.043
ENSSSCG00000040389	-	98	50.980	ENSSSCG00000029347	-	100	53.699
ENSSSCG00000040389	-	99	51.743	ENSSSCG00000038009	-	99	51.743
ENSSSCG00000040389	-	99	57.184	ENSSSCG00000027351	ZNF454	99	54.133
ENSSSCG00000040389	-	98	50.178	ENSSSCG00000039774	-	99	54.545
ENSSSCG00000040389	-	99	55.703	ENSSSCG00000027741	-	97	56.667
ENSSSCG00000040389	-	98	58.824	ENSSSCG00000003076	ZNF226	89	59.391
ENSSSCG00000040389	-	98	56.383	ENSSSCG00000003077	ZNF112	99	55.102
ENSSSCG00000040389	-	99	59.565	ENSSSCG00000003070	ZNF45	97	59.565
ENSSSCG00000040389	-	99	48.780	ENSSSCG00000031774	-	99	52.459
ENSSSCG00000040389	-	99	49.802	ENSSSCG00000022423	-	90	49.802
ENSSSCG00000040389	-	99	49.487	ENSSSCG00000032506	ZNF317	94	49.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040389	-	90	55.429	ENSAOCG00000013672	-	96	57.471	Amphiprion_ocellaris
ENSSSCG00000040389	-	90	49.568	ENSACLG00000008821	-	97	53.953	Astatotilapia_calliptera
ENSSSCG00000040389	-	84	56.000	ENSAMXG00000037981	-	77	57.522	Astyanax_mexicanus
ENSSSCG00000040389	-	83	58.148	ENSAMXG00000036633	-	62	57.143	Astyanax_mexicanus
ENSSSCG00000040389	-	84	54.967	ENSAMXG00000040677	-	87	57.310	Astyanax_mexicanus
ENSSSCG00000040389	-	85	58.416	ENSAMXG00000043423	-	81	58.416	Astyanax_mexicanus
ENSSSCG00000040389	-	85	57.647	ENSAMXG00000036241	-	82	56.069	Astyanax_mexicanus
ENSSSCG00000040389	-	98	57.721	ENSTSYG00000006246	-	99	60.434	Carlito_syrichta
ENSSSCG00000040389	-	91	55.469	ENSCGRG00001019143	-	98	53.947	Cricetulus_griseus_chok1gshd
ENSSSCG00000040389	-	98	57.609	ENSCGRG00001024303	-	99	55.858	Cricetulus_griseus_chok1gshd
ENSSSCG00000040389	-	99	55.466	ENSCGRG00001012803	-	94	56.213	Cricetulus_griseus_chok1gshd
ENSSSCG00000040389	-	99	55.466	ENSCGRG00000009742	-	94	56.213	Cricetulus_griseus_crigri
ENSSSCG00000040389	-	93	54.604	ENSCGRG00000008531	-	98	54.604	Cricetulus_griseus_crigri
ENSSSCG00000040389	-	86	46.489	ENSEBUG00000015993	-	61	48.739	Eptatretus_burgeri
ENSSSCG00000040389	-	97	49.863	ENSEBUG00000001121	-	81	49.219	Eptatretus_burgeri
ENSSSCG00000040389	-	94	48.611	ENSEBUG00000015834	-	100	48.611	Eptatretus_burgeri
ENSSSCG00000040389	-	98	49.555	ENSEBUG00000003590	-	80	50.809	Eptatretus_burgeri
ENSSSCG00000040389	-	98	49.127	ENSEBUG00000017017	-	79	48.113	Eptatretus_burgeri
ENSSSCG00000040389	-	85	51.605	ENSEBUG00000007375	-	97	51.187	Eptatretus_burgeri
ENSSSCG00000040389	-	87	51.695	ENSEBUG00000003236	-	93	50.820	Eptatretus_burgeri
ENSSSCG00000040389	-	85	53.125	ENSIPUG00000013315	-	96	53.571	Ictalurus_punctatus
ENSSSCG00000040389	-	99	60.317	ENSMAUG00000005691	-	89	60.317	Mesocricetus_auratus
ENSSSCG00000040389	-	99	54.945	ENSMAUG00000016437	-	99	56.647	Mesocricetus_auratus
ENSSSCG00000040389	-	99	53.425	ENSMOCG00000000365	-	94	52.941	Microtus_ochrogaster
ENSSSCG00000040389	-	98	57.047	MGP_CAROLIEiJ_G0018660	-	76	57.047	Mus_caroli
ENSSSCG00000040389	-	99	63.137	MGP_CAROLIEiJ_G0018683	Zfp493	99	63.137	Mus_caroli
ENSSSCG00000040389	-	99	58.396	ENSMUSG00000091474	2610021A01Rik	74	57.803	Mus_musculus
ENSSSCG00000040389	-	99	58.621	ENSMUSG00000074824	Rslcan18	80	58.389	Mus_musculus
ENSSSCG00000040389	-	99	56.738	MGP_PahariEiJ_G0012839	-	76	56.738	Mus_pahari
ENSSSCG00000040389	-	98	56.376	MGP_SPRETEiJ_G0019543	-	78	56.376	Mus_spretus
ENSSSCG00000040389	-	93	46.473	ENSPMAG00000000404	-	99	46.473	Petromyzon_marinus
ENSSSCG00000040389	-	86	60.726	ENSPNAG00000003017	-	95	63.592	Pygocentrus_nattereri
ENSSSCG00000040389	-	84	61.238	ENSPNAG00000014492	-	89	60.616	Pygocentrus_nattereri
ENSSSCG00000040389	-	90	40.838	ENSTRUG00000014476	-	90	40.838	Takifugu_rubripes