EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSSCG00000040417 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Sus_scrofa
Status
putative
Strand
Plus strand
Length
5018 bases
Position
chr17:2692869-2697886
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSSCP00000043223LSMPF01423.222.5e-0711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSSCT00000047502-279-ENSSSCP0000004322392 (aa)-A0A287AH68
Gene Model
Click here to download ENSSSCG00000040417's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040417's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSSCG00000040417-7573.333ENSSSCG00000033500SNRPD27967.347
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSSCG00000040417-7573.333ENSG00000125743SNRPD27775.000Homo_sapiens
ENSSSCG00000040417-7572.000ENSAPOG00000012310snrpd27966.327Acanthochromis_polyacanthus
ENSSSCG00000040417-7472.973ENSAMEG00000000818-7967.010Ailuropoda_melanoleuca
ENSSSCG00000040417-5584.615ENSACIG00000022689snrpd26771.429Amphilophus_citrinellus
ENSSSCG00000040417-7572.000ENSAOCG00000024413snrpd27966.327Amphiprion_ocellaris
ENSSSCG00000040417-7572.000ENSAPEG00000021711snrpd27966.327Amphiprion_percula
ENSSSCG00000040417-7471.622ENSATEG00000000868snrpd27865.306Anabas_testudineus
ENSSSCG00000040417-7472.973ENSACAG00000016779-7867.010Anolis_carolinensis
ENSSSCG00000040417-7574.667ENSANAG00000017079-7966.327Aotus_nancymaae
ENSSSCG00000040417-7573.333ENSANAG00000003063-7965.306Aotus_nancymaae
ENSSSCG00000040417-7570.667ENSANAG00000018193-7665.591Aotus_nancymaae
ENSSSCG00000040417-7471.622ENSANAG00000001612-7765.979Aotus_nancymaae
ENSSSCG00000040417-7572.000ENSACLG00000001746snrpd27966.327Astatotilapia_calliptera
ENSSSCG00000040417-7573.333ENSAMXG00000033526snrpd27967.347Astyanax_mexicanus
ENSSSCG00000040417-7573.333ENSBTAG00000012177SNRPD27967.347Bos_taurus
ENSSSCG00000040417-7565.333WBGene00004917snr-47063.218Caenorhabditis_elegans
ENSSSCG00000040417-7573.333ENSCJAG00000012413-7967.347Callithrix_jacchus
ENSSSCG00000040417-7573.333ENSCJAG00000044723-7967.347Callithrix_jacchus
ENSSSCG00000040417-7573.333ENSCJAG00000047157-7967.347Callithrix_jacchus
ENSSSCG00000040417-7574.667ENSCJAG00000047147-7968.367Callithrix_jacchus
ENSSSCG00000040417-7572.000ENSCJAG00000044646-7966.327Callithrix_jacchus
ENSSSCG00000040417-7573.333ENSCJAG00000019291-7967.347Callithrix_jacchus
ENSSSCG00000040417-7570.667ENSCJAG00000041687-7965.306Callithrix_jacchus
ENSSSCG00000040417-7572.973ENSCAFG00000000634-6375.676Canis_familiaris
ENSSSCG00000040417-7573.333ENSCAFG00000004403SNRPD27967.347Canis_familiaris
ENSSSCG00000040417-7572.973ENSCAFG00020002921-6375.676Canis_lupus_dingo
ENSSSCG00000040417-5584.615ENSCAFG00020003532-6471.429Canis_lupus_dingo
ENSSSCG00000040417-7471.622ENSCHIG00000015755-7765.979Capra_hircus
ENSSSCG00000040417-9560.870ENSTSYG00000031156-7760.870Carlito_syrichta
ENSSSCG00000040417-7573.333ENSTSYG00000011207-7967.347Carlito_syrichta
ENSSSCG00000040417-7570.667ENSCAPG00000006559-7663.441Cavia_aperea
ENSSSCG00000040417-7472.973ENSCAPG00000011695-7767.010Cavia_aperea
ENSSSCG00000040417-7563.514ENSCPOG00000025735-7759.794Cavia_porcellus
ENSSSCG00000040417-7573.333ENSCPOG00000035154-7967.347Cavia_porcellus
ENSSSCG00000040417-7572.000ENSCCAG00000011183-7966.327Cebus_capucinus
ENSSSCG00000040417-7554.667ENSCCAG00000020956-6657.333Cebus_capucinus
ENSSSCG00000040417-7568.000ENSCCAG00000012011-7963.265Cebus_capucinus
ENSSSCG00000040417-7573.333ENSCCAG00000035396SNRPD27967.347Cebus_capucinus
ENSSSCG00000040417-7554.286ENSCCAG00000030191-7651.020Cebus_capucinus
ENSSSCG00000040417-7573.333ENSCATG00000005272-7967.347Cercocebus_atys
ENSSSCG00000040417-7573.333ENSCATG00000031591-7967.347Cercocebus_atys
ENSSSCG00000040417-7573.333ENSCATG00000040410-9977.273Cercocebus_atys
ENSSSCG00000040417-7573.333ENSCLAG00000000931-7967.347Chinchilla_lanigera
ENSSSCG00000040417-7265.278ENSCLAG00000001183-5965.278Chinchilla_lanigera
ENSSSCG00000040417-7573.333ENSCSAG00000003157SNRPD27967.347Chlorocebus_sabaeus
ENSSSCG00000040417-7573.333ENSCPBG00000007259SNRPD27967.347Chrysemys_picta_bellii
ENSSSCG00000040417-7561.333ENSCING00000020031-7059.770Ciona_intestinalis
ENSSSCG00000040417-7562.667ENSCSAVG00000003527-6760.920Ciona_savignyi
ENSSSCG00000040417-7572.857ENSCANG00000035956-8163.441Colobus_angolensis_palliatus
ENSSSCG00000040417-7572.000ENSCANG00000038535-7966.327Colobus_angolensis_palliatus
ENSSSCG00000040417-7562.667ENSCGRG00001003078-6962.069Cricetulus_griseus_chok1gshd
ENSSSCG00000040417-7472.973ENSCGRG00000011635-7069.767Cricetulus_griseus_crigri
ENSSSCG00000040417-7572.000ENSCSEG00000002230snrpd27966.327Cynoglossus_semilaevis
ENSSSCG00000040417-7572.000ENSCVAG00000014834snrpd27966.327Cyprinodon_variegatus
ENSSSCG00000040417-7471.622ENSCVAG00000010204SNRPD27665.979Cyprinodon_variegatus
ENSSSCG00000040417-7573.333ENSDARG00000040440snrpd27967.347Danio_rerio
ENSSSCG00000040417-7472.973ENSDNOG00000002365-7267.010Dasypus_novemcinctus
ENSSSCG00000040417-7573.333ENSDORG00000001729Snrpd27967.347Dipodomys_ordii
ENSSSCG00000040417-7269.444FBgn0261789SmD26767.857Drosophila_melanogaster
ENSSSCG00000040417-9861.458ENSETEG00000002893-8463.542Echinops_telfairi
ENSSSCG00000040417-7369.863ENSEBUG00000002144snrpd27664.583Eptatretus_burgeri
ENSSSCG00000040417-7559.459ENSEASG00005016910-5662.162Equus_asinus_asinus
ENSSSCG00000040417-7573.333ENSEASG00005014210-7967.347Equus_asinus_asinus
ENSSSCG00000040417-5584.615ENSECAG00000007824SNRPD26371.429Equus_caballus
ENSSSCG00000040417-7572.000ENSELUG00000020393snrpd25266.327Esox_lucius
ENSSSCG00000040417-10063.265ENSFCAG00000024879-6163.265Felis_catus
ENSSSCG00000040417-7573.333ENSFCAG00000022530-7967.347Felis_catus
ENSSSCG00000040417-7573.333ENSFDAG00000015792SNRPD27967.347Fukomys_damarensis
ENSSSCG00000040417-7572.000ENSFHEG00000015591snrpd27966.327Fundulus_heteroclitus
ENSSSCG00000040417-7471.622ENSGMOG00000013857snrpd27865.979Gadus_morhua
ENSSSCG00000040417-7572.000ENSGAFG00000001246snrpd27966.327Gambusia_affinis
ENSSSCG00000040417-7470.270ENSGACG00000006697snrpd27864.948Gasterosteus_aculeatus
ENSSSCG00000040417-9664.894ENSGAGG00000017944SNRPD26367.021Gopherus_agassizii
ENSSSCG00000040417-7573.333ENSGGOG00000002350SNRPD27967.347Gorilla_gorilla
ENSSSCG00000040417-7572.000ENSHBUG00000004073snrpd27966.327Haplochromis_burtoni
ENSSSCG00000040417-7573.333ENSHGLG00000015364SNRPD27967.347Heterocephalus_glaber_female
ENSSSCG00000040417-8858.140ENSHGLG00000017154-6860.465Heterocephalus_glaber_female
ENSSSCG00000040417-7572.000ENSHGLG00100020606-5166.327Heterocephalus_glaber_male
ENSSSCG00000040417-7573.333ENSHGLG00100015694SNRPD27967.347Heterocephalus_glaber_male
ENSSSCG00000040417-7570.667ENSHCOG00000010973snrpd27965.306Hippocampus_comes
ENSSSCG00000040417-7573.333ENSIPUG00000001053snrpd27967.347Ictalurus_punctatus
ENSSSCG00000040417-7573.333ENSSTOG00000024377SNRPD27967.347Ictidomys_tridecemlineatus
ENSSSCG00000040417-7573.333ENSJJAG00000002622Snrpd27967.347Jaculus_jaculus
ENSSSCG00000040417-7572.000ENSKMAG00000001539snrpd27966.327Kryptolebias_marmoratus
ENSSSCG00000040417-7572.000ENSLBEG00000019436snrpd27966.327Labrus_bergylta
ENSSSCG00000040417-5584.615ENSLACG00000004720SNRPD26771.429Latimeria_chalumnae
ENSSSCG00000040417-7573.333ENSLOCG00000014824snrpd27967.347Lepisosteus_oculatus
ENSSSCG00000040417-7472.973ENSLAFG00000004205-7867.010Loxodonta_africana
ENSSSCG00000040417-7572.000ENSMFAG00000009957-7966.327Macaca_fascicularis
ENSSSCG00000040417-7573.333ENSMFAG00000020148-7967.347Macaca_fascicularis
ENSSSCG00000040417-7573.333ENSMFAG00000045767-7967.347Macaca_fascicularis
ENSSSCG00000040417-7573.333ENSMMUG00000032370-7967.347Macaca_mulatta
ENSSSCG00000040417-7570.667ENSMMUG00000030518-7965.306Macaca_mulatta
ENSSSCG00000040417-7572.000ENSMMUG00000032525-7966.327Macaca_mulatta
ENSSSCG00000040417-7573.333ENSMNEG00000021599-7967.347Macaca_nemestrina
ENSSSCG00000040417-7365.672ENSMNEG00000039787-7258.889Macaca_nemestrina
ENSSSCG00000040417-7572.000ENSMNEG00000010649-7966.327Macaca_nemestrina
ENSSSCG00000040417-7570.667ENSMLEG00000008325-7965.306Mandrillus_leucophaeus
ENSSSCG00000040417-7572.000ENSMAMG00000013925snrpd27966.327Mastacembelus_armatus
ENSSSCG00000040417-7572.000ENSMZEG00005013054snrpd27966.327Maylandia_zebra
ENSSSCG00000040417-7573.333ENSMAUG00000018849Snrpd27967.347Mesocricetus_auratus
ENSSSCG00000040417-7573.333ENSMICG00000031545SNRPD27967.347Microcebus_murinus
ENSSSCG00000040417-7566.667ENSMOCG00000017135-6369.333Microtus_ochrogaster
ENSSSCG00000040417-7573.333ENSMOCG00000017080Snrpd27967.347Microtus_ochrogaster
ENSSSCG00000040417-7572.000ENSMMOG00000004936snrpd27966.327Mola_mola
ENSSSCG00000040417-7472.973ENSMODG00000021539-7867.010Monodelphis_domestica
ENSSSCG00000040417-7572.000ENSMALG00000010608snrpd27966.327Monopterus_albus
ENSSSCG00000040417-7572.000MGP_CAROLIEiJ_G0018529-7966.327Mus_caroli
ENSSSCG00000040417-7573.333MGP_CAROLIEiJ_G0029275-7967.347Mus_caroli
ENSSSCG00000040417-7573.333ENSMUSG00000040824Snrpd27967.347Mus_musculus
ENSSSCG00000040417-7573.333MGP_PahariEiJ_G0021135-7967.347Mus_pahari
ENSSSCG00000040417-7573.333MGP_SPRETEiJ_G0030359Snrpd27967.347Mus_spretus
ENSSSCG00000040417-7573.333MGP_SPRETEiJ_G0019409-7968.367Mus_spretus
ENSSSCG00000040417-7472.973ENSMPUG00000005733-7667.010Mustela_putorius_furo
ENSSSCG00000040417-7570.667ENSMLUG00000025417-7066.667Myotis_lucifugus
ENSSSCG00000040417-7472.973ENSMLUG00000001306-7967.010Myotis_lucifugus
ENSSSCG00000040417-7570.667ENSMLUG00000026353-6968.966Myotis_lucifugus
ENSSSCG00000040417-8760.000ENSMLUG00000026025-6962.353Myotis_lucifugus
ENSSSCG00000040417-7369.863ENSMLUG00000030461-7862.500Myotis_lucifugus
ENSSSCG00000040417-9556.522ENSNGAG00000013160-5858.696Nannospalax_galili
ENSSSCG00000040417-7573.333ENSNGAG00000010411-7967.347Nannospalax_galili
ENSSSCG00000040417-7572.000ENSNBRG00000000805snrpd27966.327Neolamprologus_brichardi
ENSSSCG00000040417-7573.333ENSNLEG00000002274SNRPD27967.347Nomascus_leucogenys
ENSSSCG00000040417-7472.973ENSMEUG00000012031-7967.010Notamacropus_eugenii
ENSSSCG00000040417-7572.000ENSOPRG00000008321-7966.327Ochotona_princeps
ENSSSCG00000040417-6574.242ENSODEG00000011751-6277.273Octodon_degus
ENSSSCG00000040417-7573.333ENSODEG00000008857-7967.347Octodon_degus
ENSSSCG00000040417-7471.622ENSODEG00000012799-7565.979Octodon_degus
ENSSSCG00000040417-7573.333ENSODEG00000020096-7967.347Octodon_degus
ENSSSCG00000040417-7570.667ENSODEG00000020094-7068.966Octodon_degus
ENSSSCG00000040417-7573.333ENSODEG00000020139-7967.347Octodon_degus
ENSSSCG00000040417-6169.355ENSODEG00000008077-8372.581Octodon_degus
ENSSSCG00000040417-7572.000ENSODEG00000019447-7966.327Octodon_degus
ENSSSCG00000040417-7572.000ENSONIG00000005406snrpd27966.327Oreochromis_niloticus
ENSSSCG00000040417-7472.973ENSOANG00000000813-7567.010Ornithorhynchus_anatinus
ENSSSCG00000040417-7573.333ENSOCUG00000022402SNRPD27967.347Oryctolagus_cuniculus
ENSSSCG00000040417-7572.000ENSORLG00000026725snrpd27966.327Oryzias_latipes
ENSSSCG00000040417-7572.000ENSORLG00020011312snrpd27966.327Oryzias_latipes_hni
ENSSSCG00000040417-7572.000ENSORLG00015019579snrpd27966.327Oryzias_latipes_hsok
ENSSSCG00000040417-7572.000ENSOMEG00000012661snrpd27966.327Oryzias_melastigma
ENSSSCG00000040417-7472.973ENSOGAG00000030128-7967.010Otolemur_garnettii
ENSSSCG00000040417-7572.000ENSOARG00000016742-7966.327Ovis_aries
ENSSSCG00000040417-7472.973ENSOARG00000010203-7867.010Ovis_aries
ENSSSCG00000040417-7573.333ENSPPAG00000038031SNRPD27967.347Pan_paniscus
ENSSSCG00000040417-10060.204ENSPPRG00000000040-7562.245Panthera_pardus
ENSSSCG00000040417-7573.333ENSPPRG00000012309SNRPD27967.347Panthera_pardus
ENSSSCG00000040417-5584.615ENSPTIG00000006666-6771.429Panthera_tigris_altaica
ENSSSCG00000040417-6565.152ENSPTIG00000000935-6968.182Panthera_tigris_altaica
ENSSSCG00000040417-7573.333ENSPTRG00000011162SNRPD27967.347Pan_troglodytes
ENSSSCG00000040417-7573.333ENSPANG00000017743-7967.347Papio_anubis
ENSSSCG00000040417-7573.333ENSPANG00000008802-7967.347Papio_anubis
ENSSSCG00000040417-7573.333ENSPKIG00000001110snrpd27967.347Paramormyrops_kingsleyae
ENSSSCG00000040417-5584.615ENSPSIG00000015823-6771.429Pelodiscus_sinensis
ENSSSCG00000040417-7470.270ENSPMGG00000016148snrpd27864.948Periophthalmus_magnuspinnatus
ENSSSCG00000040417-7472.973ENSPEMG00000004117-7767.010Peromyscus_maniculatus_bairdii
ENSSSCG00000040417-7569.333ENSPEMG00000009398-7964.286Peromyscus_maniculatus_bairdii
ENSSSCG00000040417-7573.333ENSPCIG00000022986SNRPD27967.347Phascolarctos_cinereus
ENSSSCG00000040417-7572.000ENSPFOG00000016809snrpd27966.327Poecilia_formosa
ENSSSCG00000040417-7572.000ENSPLAG00000010725snrpd27966.327Poecilia_latipinna
ENSSSCG00000040417-7572.000ENSPMEG00000000107snrpd27966.327Poecilia_mexicana
ENSSSCG00000040417-6871.014ENSPREG00000004078snrpd27665.217Poecilia_reticulata
ENSSSCG00000040417-7573.333ENSPPYG00000010129SNRPD27967.347Pongo_abelii
ENSSSCG00000040417-7573.333ENSPCAG00000016818SNRPD27967.347Procavia_capensis
ENSSSCG00000040417-7573.333ENSPCOG00000028811-7967.347Propithecus_coquereli
ENSSSCG00000040417-7573.333ENSPCOG00000001429-7967.347Propithecus_coquereli
ENSSSCG00000040417-7472.973ENSPVAG00000001345-7967.010Pteropus_vampyrus
ENSSSCG00000040417-7572.000ENSPNYG00000011826snrpd27966.327Pundamilia_nyererei
ENSSSCG00000040417-7573.333ENSPNAG00000025554snrpd27967.347Pygocentrus_nattereri
ENSSSCG00000040417-7573.333ENSRNOG00000015844Snrpd27967.347Rattus_norvegicus
ENSSSCG00000040417-7572.000ENSRNOG00000048758Snrpd2l7966.327Rattus_norvegicus
ENSSSCG00000040417-7071.429ENSRBIG00000032742-6772.973Rhinopithecus_bieti
ENSSSCG00000040417-7573.333ENSRBIG00000032406-8376.119Rhinopithecus_bieti
ENSSSCG00000040417-7573.333ENSRBIG00000040969SNRPD27967.347Rhinopithecus_bieti
ENSSSCG00000040417-7572.000ENSRROG00000030974-8376.119Rhinopithecus_roxellana
ENSSSCG00000040417-7573.333ENSRROG00000034764SNRPD27967.347Rhinopithecus_roxellana
ENSSSCG00000040417-5251.020YLR275WSMD26641.096Saccharomyces_cerevisiae
ENSSSCG00000040417-7573.333ENSSBOG00000009827-7967.347Saimiri_boliviensis_boliviensis
ENSSSCG00000040417-7573.333ENSSBOG00000035164-7967.347Saimiri_boliviensis_boliviensis
ENSSSCG00000040417-7573.333ENSSBOG00000017764-7967.347Saimiri_boliviensis_boliviensis
ENSSSCG00000040417-7572.000ENSSBOG00000019992-6466.327Saimiri_boliviensis_boliviensis
ENSSSCG00000040417-7472.973ENSSHAG00000003772-7867.010Sarcophilus_harrisii
ENSSSCG00000040417-7573.333ENSSFOG00015016069-7967.347Scleropages_formosus
ENSSSCG00000040417-7573.333ENSSFOG00015022535snrpd27967.347Scleropages_formosus
ENSSSCG00000040417-7570.667ENSSMAG00000003422snrpd27965.306Scophthalmus_maximus
ENSSSCG00000040417-7572.000ENSSDUG00000005519snrpd27966.327Seriola_dumerili
ENSSSCG00000040417-7572.000ENSSLDG00000009397snrpd27966.327Seriola_lalandi_dorsalis
ENSSSCG00000040417-7472.973ENSSARG00000009167-7967.010Sorex_araneus
ENSSSCG00000040417-7572.000ENSSPAG00000015767snrpd27966.327Stegastes_partitus
ENSSSCG00000040417-7570.667ENSTRUG00000023014snrpd27965.306Takifugu_rubripes
ENSSSCG00000040417-7572.000ENSTNIG00000011736snrpd28566.327Tetraodon_nigroviridis
ENSSSCG00000040417-7573.333ENSTBEG00000001752SNRPD27967.347Tupaia_belangeri
ENSSSCG00000040417-7573.333ENSTTRG00000014299-7967.347Tursiops_truncatus
ENSSSCG00000040417-7558.667ENSUAMG00000022454-6757.471Ursus_americanus
ENSSSCG00000040417-7573.333ENSUAMG00000023173SNRPD27967.347Ursus_americanus
ENSSSCG00000040417-7573.333ENSUMAG00000023685-7967.347Ursus_maritimus
ENSSSCG00000040417-7558.667ENSUMAG00000001547-6757.471Ursus_maritimus
ENSSSCG00000040417-5584.615ENSVVUG00000003181-6471.429Vulpes_vulpes
ENSSSCG00000040417-7572.973ENSVVUG00000016748-6375.676Vulpes_vulpes
ENSSSCG00000040417-7472.973ENSXETG00000002173snrpd27967.010Xenopus_tropicalis
ENSSSCG00000040417-7471.622ENSXCOG00000001082snrpd27465.306Xiphophorus_couchianus
ENSSSCG00000040417-7572.000ENSXMAG00000001018snrpd27966.327Xiphophorus_maculatus

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