EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000040441 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 4788 bases
Position: chr13:69155560-69160347
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000057397	PTH2	PF01981.16	1.8e-10	1	1
ENSSSCP00000033065	PTH2	PF01981.16	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000042912	-	372	-	ENSSSCP00000033065	123 (aa)	-	A0A286ZNM6
ENSSSCT00000059389	-	366	-	ENSSSCP00000057397	121 (aa)	-	A0A287BLV2

Gene Model

Click here to download ENSSSCG00000040441's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040441's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040441	-	93	66.129	ENSG00000184924	PTRHD1	89	66.129	Homo_sapiens
ENSSSCG00000040441	-	92	48.361	ENSAPOG00000024433	ptrhd1	97	48.361	Acanthochromis_polyacanthus
ENSSSCG00000040441	-	94	60.000	ENSAMEG00000002651	PTRHD1	89	60.000	Ailuropoda_melanoleuca
ENSSSCG00000040441	-	92	48.361	ENSACIG00000002596	ptrhd1	97	48.361	Amphilophus_citrinellus
ENSSSCG00000040441	-	92	48.361	ENSAOCG00000007632	ptrhd1	97	48.361	Amphiprion_ocellaris
ENSSSCG00000040441	-	92	48.361	ENSAPEG00000011491	ptrhd1	97	48.361	Amphiprion_percula
ENSSSCG00000040441	-	92	48.361	ENSATEG00000019199	ptrhd1	97	48.361	Anabas_testudineus
ENSSSCG00000040441	-	93	66.129	ENSANAG00000019089	PTRHD1	92	64.341	Aotus_nancymaae
ENSSSCG00000040441	-	92	48.361	ENSACLG00000000814	ptrhd1	97	48.361	Astatotilapia_calliptera
ENSSSCG00000040441	-	88	45.299	ENSAMXG00000034266	ptrhd1	81	45.299	Astyanax_mexicanus
ENSSSCG00000040441	-	95	64.286	ENSBTAG00000015012	PTRHD1	90	64.286	Bos_taurus
ENSSSCG00000040441	-	76	37.634	WBGene00050885	Y94H6A.12	92	43.636	Caenorhabditis_elegans
ENSSSCG00000040441	-	93	65.323	ENSCJAG00000008012	PTRHD1	92	63.566	Callithrix_jacchus
ENSSSCG00000040441	-	94	63.200	ENSCAFG00000024865	PTRHD1	89	63.200	Canis_familiaris
ENSSSCG00000040441	-	95	65.079	ENSCHIG00000014757	PTRHD1	90	65.079	Capra_hircus
ENSSSCG00000040441	-	93	65.854	ENSTSYG00000009995	PTRHD1	88	65.854	Carlito_syrichta
ENSSSCG00000040441	-	93	60.484	ENSCPOG00000005561	PTRHD1	89	60.484	Cavia_porcellus
ENSSSCG00000040441	-	98	64.341	ENSCCAG00000033856	PTRHD1	92	64.341	Cebus_capucinus
ENSSSCG00000040441	-	93	66.667	ENSCATG00000033690	PTRHD1	88	66.667	Cercocebus_atys
ENSSSCG00000040441	-	100	62.500	ENSCLAG00000006505	PTRHD1	94	62.500	Chinchilla_lanigera
ENSSSCG00000040441	-	93	66.129	ENSCSAG00000008490	PTRHD1	89	66.129	Chlorocebus_sabaeus
ENSSSCG00000040441	-	95	66.129	ENSCHOG00000001920	PTRHD1	91	66.129	Choloepus_hoffmanni
ENSSSCG00000040441	-	93	50.000	ENSCPBG00000022276	PTRHD1	88	50.000	Chrysemys_picta_bellii
ENSSSCG00000040441	-	75	44.681	ENSCING00000019647	-	80	44.681	Ciona_intestinalis
ENSSSCG00000040441	-	93	65.323	ENSCANG00000034444	PTRHD1	89	65.323	Colobus_angolensis_palliatus
ENSSSCG00000040441	-	93	62.097	ENSCGRG00001003289	Ptrhd1	59	62.097	Cricetulus_griseus_chok1gshd
ENSSSCG00000040441	-	97	60.938	ENSCGRG00000011834	Ptrhd1	91	60.938	Cricetulus_griseus_crigri
ENSSSCG00000040441	-	92	47.967	ENSCSEG00000006943	ptrhd1	97	47.967	Cynoglossus_semilaevis
ENSSSCG00000040441	-	92	47.541	ENSCVAG00000016345	ptrhd1	97	47.541	Cyprinodon_variegatus
ENSSSCG00000040441	-	94	48.718	ENSDARG00000016122	ptrhd1	90	48.718	Danio_rerio
ENSSSCG00000040441	-	93	64.516	ENSDNOG00000043646	PTRHD1	82	64.516	Dasypus_novemcinctus
ENSSSCG00000040441	-	93	63.415	ENSDORG00000026776	Ptrhd1	88	63.415	Dipodomys_ordii
ENSSSCG00000040441	-	78	45.361	FBgn0038446	CG14903	82	45.361	Drosophila_melanogaster
ENSSSCG00000040441	-	93	51.667	ENSETEG00000009379	-	91	51.667	Echinops_telfairi
ENSSSCG00000040441	-	52	56.338	ENSETEG00000001615	-	85	56.338	Echinops_telfairi
ENSSSCG00000040441	-	78	48.454	ENSEBUG00000002249	ptrhd1	80	48.454	Eptatretus_burgeri
ENSSSCG00000040441	-	93	45.082	ENSEASG00005001302	-	87	45.082	Equus_asinus_asinus
ENSSSCG00000040441	-	95	66.667	ENSECAG00000017730	PTRHD1	90	66.667	Equus_caballus
ENSSSCG00000040441	-	93	46.721	ENSECAG00000005314	-	84	46.721	Equus_caballus
ENSSSCG00000040441	-	95	57.600	ENSEEUG00000004263	PTRHD1	90	57.600	Erinaceus_europaeus
ENSSSCG00000040441	-	92	44.262	ENSELUG00000003837	ptrhd1	97	44.262	Esox_lucius
ENSSSCG00000040441	-	99	60.448	ENSFCAG00000003648	PTRHD1	92	61.538	Felis_catus
ENSSSCG00000040441	-	98	60.769	ENSFDAG00000004017	PTRHD1	93	60.769	Fukomys_damarensis
ENSSSCG00000040441	-	92	47.541	ENSFHEG00000009135	ptrhd1	97	47.541	Fundulus_heteroclitus
ENSSSCG00000040441	-	77	52.083	ENSGALG00000016610	PTRHD1	70	52.083	Gallus_gallus
ENSSSCG00000040441	-	92	47.541	ENSGAFG00000005717	ptrhd1	97	47.541	Gambusia_affinis
ENSSSCG00000040441	-	91	45.833	ENSGACG00000006743	ptrhd1	94	45.833	Gasterosteus_aculeatus
ENSSSCG00000040441	-	88	53.390	ENSGAGG00000023951	PTRHD1	93	53.390	Gopherus_agassizii
ENSSSCG00000040441	-	92	65.574	ENSGGOG00000043870	PTRHD1	97	65.574	Gorilla_gorilla
ENSSSCG00000040441	-	92	48.361	ENSHBUG00000014289	ptrhd1	97	48.361	Haplochromis_burtoni
ENSSSCG00000040441	-	93	60.976	ENSHGLG00000008203	PTRHD1	88	60.976	Heterocephalus_glaber_female
ENSSSCG00000040441	-	93	60.976	ENSHGLG00100012553	PTRHD1	88	60.976	Heterocephalus_glaber_male
ENSSSCG00000040441	-	93	62.602	ENSHGLG00100004341	-	90	62.602	Heterocephalus_glaber_male
ENSSSCG00000040441	-	92	47.967	ENSHCOG00000013504	ptrhd1	97	47.967	Hippocampus_comes
ENSSSCG00000040441	-	80	47.000	ENSIPUG00000004885	ptrhd1	84	47.000	Ictalurus_punctatus
ENSSSCG00000040441	-	95	64.286	ENSSTOG00000006030	PTRHD1	90	64.286	Ictidomys_tridecemlineatus
ENSSSCG00000040441	-	98	62.308	ENSJJAG00000024180	Ptrhd1	93	62.308	Jaculus_jaculus
ENSSSCG00000040441	-	78	51.546	ENSKMAG00000016961	ptrhd1	86	51.546	Kryptolebias_marmoratus
ENSSSCG00000040441	-	92	48.361	ENSLBEG00000024406	ptrhd1	97	48.361	Labrus_bergylta
ENSSSCG00000040441	-	72	53.333	ENSLACG00000018052	PTRHD1	77	51.546	Latimeria_chalumnae
ENSSSCG00000040441	-	91	46.667	ENSLOCG00000015890	ptrhd1	94	46.667	Lepisosteus_oculatus
ENSSSCG00000040441	-	95	62.698	ENSLAFG00000014453	PTRHD1	90	62.698	Loxodonta_africana
ENSSSCG00000040441	-	93	64.516	ENSMFAG00000040267	PTRHD1	89	64.516	Macaca_fascicularis
ENSSSCG00000040441	-	93	64.516	ENSMMUG00000009598	PTRHD1	89	64.516	Macaca_mulatta
ENSSSCG00000040441	-	93	64.516	ENSMNEG00000035044	PTRHD1	89	64.516	Macaca_nemestrina
ENSSSCG00000040441	-	93	65.041	ENSMLEG00000030314	PTRHD1	88	65.041	Mandrillus_leucophaeus
ENSSSCG00000040441	-	92	44.262	ENSMAMG00000021201	ptrhd1	97	44.262	Mastacembelus_armatus
ENSSSCG00000040441	-	92	48.361	ENSMZEG00005021808	ptrhd1	97	48.361	Maylandia_zebra
ENSSSCG00000040441	-	93	60.976	ENSMAUG00000019251	Ptrhd1	88	60.976	Mesocricetus_auratus
ENSSSCG00000040441	-	98	64.341	ENSMICG00000001578	PTRHD1	92	64.341	Microcebus_murinus
ENSSSCG00000040441	-	97	60.156	ENSMOCG00000001204	Ptrhd1	97	58.824	Microtus_ochrogaster
ENSSSCG00000040441	-	92	45.902	ENSMMOG00000015284	ptrhd1	97	45.902	Mola_mola
ENSSSCG00000040441	-	98	52.672	ENSMODG00000015895	PTRHD1	93	52.672	Monodelphis_domestica
ENSSSCG00000040441	-	92	44.262	ENSMALG00000003471	ptrhd1	97	44.262	Monopterus_albus
ENSSSCG00000040441	-	99	61.194	MGP_CAROLIEiJ_G0017582	Ptrhd1	96	61.194	Mus_caroli
ENSSSCG00000040441	-	93	62.903	ENSMUSG00000096199	Ptrhd1	89	62.903	Mus_musculus
ENSSSCG00000040441	-	93	62.903	MGP_SPRETEiJ_G0018426	Ptrhd1	89	62.903	Mus_spretus
ENSSSCG00000040441	-	94	61.600	ENSMPUG00000014016	PTRHD1	89	61.600	Mustela_putorius_furo
ENSSSCG00000040441	-	95	61.905	ENSMLUG00000014127	PTRHD1	90	61.905	Myotis_lucifugus
ENSSSCG00000040441	-	93	59.350	ENSNGAG00000016335	Ptrhd1	88	59.350	Nannospalax_galili
ENSSSCG00000040441	-	92	48.361	ENSNBRG00000009690	ptrhd1	97	48.361	Neolamprologus_brichardi
ENSSSCG00000040441	-	100	63.235	ENSNLEG00000000990	PTRHD1	97	63.235	Nomascus_leucogenys
ENSSSCG00000040441	-	56	46.753	ENSMEUG00000010482	-	92	46.753	Notamacropus_eugenii
ENSSSCG00000040441	-	93	61.290	ENSOPRG00000008600	PTRHD1	89	61.290	Ochotona_princeps
ENSSSCG00000040441	-	93	63.710	ENSODEG00000007805	PTRHD1	86	63.710	Octodon_degus
ENSSSCG00000040441	-	94	48.000	ENSONIG00000015722	ptrhd1	92	48.000	Oreochromis_niloticus
ENSSSCG00000040441	-	93	58.065	ENSOCUG00000015432	PTRHD1	89	58.065	Oryctolagus_cuniculus
ENSSSCG00000040441	-	78	47.959	ENSORLG00000028768	ptrhd1	83	47.959	Oryzias_latipes
ENSSSCG00000040441	-	78	47.959	ENSORLG00020002857	ptrhd1	83	47.959	Oryzias_latipes_hni
ENSSSCG00000040441	-	78	47.959	ENSORLG00015018271	ptrhd1	84	47.959	Oryzias_latipes_hsok
ENSSSCG00000040441	-	92	43.902	ENSOMEG00000017594	ptrhd1	97	43.902	Oryzias_melastigma
ENSSSCG00000040441	-	93	61.290	ENSOGAG00000000756	PTRHD1	89	61.290	Otolemur_garnettii
ENSSSCG00000040441	-	95	64.286	ENSOARG00000018052	PTRHD1	90	64.286	Ovis_aries
ENSSSCG00000040441	-	93	66.129	ENSPPAG00000035395	PTRHD1	89	66.129	Pan_paniscus
ENSSSCG00000040441	-	99	60.448	ENSPPRG00000022961	PTRHD1	92	61.538	Panthera_pardus
ENSSSCG00000040441	-	99	60.448	ENSPTIG00000012136	PTRHD1	92	61.538	Panthera_tigris_altaica
ENSSSCG00000040441	-	93	66.129	ENSPTRG00000011716	PTRHD1	89	66.129	Pan_troglodytes
ENSSSCG00000040441	-	93	65.323	ENSPANG00000006781	PTRHD1	89	65.323	Papio_anubis
ENSSSCG00000040441	-	96	42.188	ENSPKIG00000015207	ptrhd1	86	42.188	Paramormyrops_kingsleyae
ENSSSCG00000040441	-	80	52.000	ENSPMGG00000020297	ptrhd1	97	48.361	Periophthalmus_magnuspinnatus
ENSSSCG00000040441	-	73	51.648	ENSPMAG00000007352	ptrhd1	77	52.577	Petromyzon_marinus
ENSSSCG00000040441	-	79	63.636	ENSPCIG00000025242	PTRHD1	79	63.636	Phascolarctos_cinereus
ENSSSCG00000040441	-	93	47.154	ENSPFOG00000004468	ptrhd1	87	47.154	Poecilia_formosa
ENSSSCG00000040441	-	92	47.541	ENSPLAG00000018019	ptrhd1	97	47.541	Poecilia_latipinna
ENSSSCG00000040441	-	92	47.541	ENSPMEG00000001321	ptrhd1	97	47.541	Poecilia_mexicana
ENSSSCG00000040441	-	92	47.541	ENSPREG00000017624	ptrhd1	97	47.541	Poecilia_reticulata
ENSSSCG00000040441	-	93	64.516	ENSPPYG00000012597	PTRHD1	89	64.516	Pongo_abelii
ENSSSCG00000040441	-	95	61.905	ENSPCAG00000007535	PTRHD1	90	61.905	Procavia_capensis
ENSSSCG00000040441	-	98	63.566	ENSPCOG00000003110	PTRHD1	92	63.566	Propithecus_coquereli
ENSSSCG00000040441	-	93	63.710	ENSPVAG00000017514	PTRHD1	90	63.492	Pteropus_vampyrus
ENSSSCG00000040441	-	92	48.361	ENSPNYG00000016755	ptrhd1	97	48.361	Pundamilia_nyererei
ENSSSCG00000040441	-	88	45.299	ENSPNAG00000028214	ptrhd1	92	45.299	Pygocentrus_nattereri
ENSSSCG00000040441	-	99	61.069	ENSRNOG00000004059	Ptrhd1	94	61.069	Rattus_norvegicus
ENSSSCG00000040441	-	93	66.129	ENSRBIG00000032190	PTRHD1	89	66.129	Rhinopithecus_bieti
ENSSSCG00000040441	-	93	66.129	ENSRROG00000029627	PTRHD1	89	66.129	Rhinopithecus_roxellana
ENSSSCG00000040441	-	93	65.323	ENSSBOG00000031751	PTRHD1	92	63.566	Saimiri_boliviensis_boliviensis
ENSSSCG00000040441	-	79	62.626	ENSSHAG00000005774	PTRHD1	64	62.626	Sarcophilus_harrisii
ENSSSCG00000040441	-	75	50.000	ENSSFOG00015000526	ptrhd1	77	50.000	Scleropages_formosus
ENSSSCG00000040441	-	78	51.546	ENSSMAG00000004450	ptrhd1	92	47.009	Scophthalmus_maximus
ENSSSCG00000040441	-	93	47.967	ENSSDUG00000004610	ptrhd1	83	47.967	Seriola_dumerili
ENSSSCG00000040441	-	92	48.361	ENSSLDG00000006231	ptrhd1	97	48.361	Seriola_lalandi_dorsalis
ENSSSCG00000040441	-	84	54.867	ENSSPUG00000002905	PTRHD1	86	54.386	Sphenodon_punctatus
ENSSSCG00000040441	-	92	48.361	ENSSPAG00000000997	ptrhd1	97	48.361	Stegastes_partitus
ENSSSCG00000040441	-	98	44.275	ENSTGUG00000015169	-	95	44.275	Taeniopygia_guttata
ENSSSCG00000040441	-	92	45.902	ENSTRUG00000007201	ptrhd1	97	45.902	Takifugu_rubripes
ENSSSCG00000040441	-	92	47.541	ENSTNIG00000019143	ptrhd1	97	47.541	Tetraodon_nigroviridis
ENSSSCG00000040441	-	93	63.415	ENSTTRG00000015128	PTRHD1	88	63.415	Tursiops_truncatus
ENSSSCG00000040441	-	94	60.000	ENSUAMG00000007305	PTRHD1	89	60.000	Ursus_americanus
ENSSSCG00000040441	-	99	63.910	ENSVPAG00000005556	PTRHD1	96	63.910	Vicugna_pacos
ENSSSCG00000040441	-	74	56.989	ENSXETG00000021176	ptrhd1	71	58.586	Xenopus_tropicalis
ENSSSCG00000040441	-	92	47.541	ENSXCOG00000019083	ptrhd1	97	47.541	Xiphophorus_couchianus
ENSSSCG00000040441	-	92	47.541	ENSXMAG00000024458	ptrhd1	97	47.541	Xiphophorus_maculatus