EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000040491 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 1498 bases
Position: chr13:112989559-112991056
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000059018	La	PF05383.17	1.7e-15	1	1
ENSSSCP00000044362	La	PF05383.17	2.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000052359	-	780	-	ENSSSCP00000044362	259 (aa)	-	A0A287AK37
ENSSSCT00000037107	-	663	-	ENSSSCP00000059018	220 (aa)	-	A0A287BR77

Gene Model

Click here to download ENSSSCG00000040491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040491	-	99	75.862	ENSG00000138709	LARP1B	73	55.967	Homo_sapiens
ENSSSCG00000040491	-	99	73.529	ENSAMEG00000002748	LARP1B	73	58.025	Ailuropoda_melanoleuca
ENSSSCG00000040491	-	87	59.556	ENSANAG00000034618	LARP1B	96	49.191	Aotus_nancymaae
ENSSSCG00000040491	-	99	72.414	ENSCJAG00000003338	LARP1B	73	55.556	Callithrix_jacchus
ENSSSCG00000040491	-	99	73.529	ENSCAFG00020018899	LARP1B	99	56.794	Canis_lupus_dingo
ENSSSCG00000040491	-	99	76.471	ENSCHIG00000023144	LARP1B	99	55.944	Capra_hircus
ENSSSCG00000040491	-	100	54.671	ENSTSYG00000002037	-	100	53.472	Carlito_syrichta
ENSSSCG00000040491	-	99	46.565	ENSCPOG00000034668	-	99	48.263	Cavia_porcellus
ENSSSCG00000040491	-	100	75.862	ENSCCAG00000021948	LARP1B	73	56.379	Cebus_capucinus
ENSSSCG00000040491	-	99	75.862	ENSCATG00000013541	LARP1B	72	52.066	Cercocebus_atys
ENSSSCG00000040491	-	99	53.448	ENSCLAG00000006448	-	99	52.962	Chinchilla_lanigera
ENSSSCG00000040491	-	95	79.310	ENSCANG00000026958	LARP1B	99	55.052	Colobus_angolensis_palliatus
ENSSSCG00000040491	-	99	77.778	ENSCGRG00001004660	-	99	55.052	Cricetulus_griseus_chok1gshd
ENSSSCG00000040491	-	99	77.778	ENSCGRG00000001914	-	99	55.052	Cricetulus_griseus_crigri
ENSSSCG00000040491	-	100	65.899	ENSEASG00005018106	LARP1B	100	57.292	Equus_asinus_asinus
ENSSSCG00000040491	-	99	73.529	ENSFCAG00000014650	-	73	56.790	Felis_catus
ENSSSCG00000040491	-	99	75.862	ENSGGOG00000015900	LARP1B	73	55.556	Gorilla_gorilla
ENSSSCG00000040491	-	88	59.434	ENSHGLG00000013922	-	95	47.973	Heterocephalus_glaber_female
ENSSSCG00000040491	-	99	52.055	ENSHGLG00000006728	-	99	55.017	Heterocephalus_glaber_female
ENSSSCG00000040491	-	88	59.434	ENSHGLG00100016491	-	95	47.973	Heterocephalus_glaber_male
ENSSSCG00000040491	-	99	52.982	ENSHGLG00100014041	-	95	56.140	Heterocephalus_glaber_male
ENSSSCG00000040491	-	84	51.389	ENSSTOG00000033183	-	82	51.163	Ictidomys_tridecemlineatus
ENSSSCG00000040491	-	99	77.778	ENSSTOG00000008596	-	99	55.556	Ictidomys_tridecemlineatus
ENSSSCG00000040491	-	87	57.658	ENSSTOG00000021917	-	94	50.162	Ictidomys_tridecemlineatus
ENSSSCG00000040491	-	79	63.874	ENSSTOG00000034510	-	64	57.399	Ictidomys_tridecemlineatus
ENSSSCG00000040491	-	99	53.310	ENSJJAG00000022360	Larp1b	99	53.846	Jaculus_jaculus
ENSSSCG00000040491	-	67	66.892	ENSLACG00000015247	LARP1B	54	51.659	Latimeria_chalumnae
ENSSSCG00000040491	-	97	72.414	ENSLAFG00000008473	-	64	62.673	Loxodonta_africana
ENSSSCG00000040491	-	99	57.265	ENSMFAG00000003306	-	94	54.661	Macaca_fascicularis
ENSSSCG00000040491	-	99	75.862	ENSMFAG00000002218	LARP1B	73	55.967	Macaca_fascicularis
ENSSSCG00000040491	-	99	75.862	ENSMMUG00000021347	LARP1B	73	55.967	Macaca_mulatta
ENSSSCG00000040491	-	99	55.844	ENSMNEG00000027747	-	93	56.769	Macaca_nemestrina
ENSSSCG00000040491	-	99	77.778	ENSMAUG00000007879	-	99	54.007	Mesocricetus_auratus
ENSSSCG00000040491	-	89	61.674	ENSMICG00000036111	LARP1B	73	57.202	Microcebus_murinus
ENSSSCG00000040491	-	94	71.875	ENSMICG00000028052	-	63	46.454	Microcebus_murinus
ENSSSCG00000040491	-	97	50.714	ENSMICG00000037883	-	88	52.857	Microcebus_murinus
ENSSSCG00000040491	-	89	62.281	ENSMOCG00000001490	Larp1b	88	56.790	Microtus_ochrogaster
ENSSSCG00000040491	-	99	54.355	MGP_CAROLIEiJ_G0024962	Larp1b	99	53.310	Mus_caroli
ENSSSCG00000040491	-	99	55.749	ENSMUSG00000025762	Larp1b	99	54.704	Mus_musculus
ENSSSCG00000040491	-	99	53.659	MGP_PahariEiJ_G0026403	Larp1b	99	54.355	Mus_pahari
ENSSSCG00000040491	-	99	55.749	MGP_SPRETEiJ_G0025897	Larp1b	99	54.704	Mus_spretus
ENSSSCG00000040491	-	99	75.862	ENSNLEG00000013819	LARP1B	73	56.379	Nomascus_leucogenys
ENSSSCG00000040491	-	99	52.613	ENSODEG00000001292	-	99	53.659	Octodon_degus
ENSSSCG00000040491	-	99	75.862	ENSPPAG00000030439	LARP1B	73	55.967	Pan_paniscus
ENSSSCG00000040491	-	99	73.529	ENSPPRG00000002743	-	73	56.790	Panthera_pardus
ENSSSCG00000040491	-	99	73.529	ENSPTIG00000011225	LARP1B	64	63.084	Panthera_tigris_altaica
ENSSSCG00000040491	-	99	75.862	ENSPTRG00000016437	LARP1B	73	55.967	Pan_troglodytes
ENSSSCG00000040491	-	99	75.862	ENSPANG00000012488	LARP1B	73	55.556	Papio_anubis
ENSSSCG00000040491	-	99	64.706	ENSPCIG00000026516	LARP1B	85	52.265	Phascolarctos_cinereus
ENSSSCG00000040491	-	89	61.233	ENSPCOG00000021874	LARP1B	73	56.790	Propithecus_coquereli
ENSSSCG00000040491	-	99	77.778	ENSRNOG00000038366	Larp1b	73	57.202	Rattus_norvegicus
ENSSSCG00000040491	-	84	62.963	ENSRBIG00000039982	-	99	48.457	Rhinopithecus_bieti
ENSSSCG00000040491	-	89	55.752	ENSRBIG00000038568	-	95	45.640	Rhinopithecus_bieti
ENSSSCG00000040491	-	99	51.220	ENSRROG00000038525	-	95	52.098	Rhinopithecus_roxellana
ENSSSCG00000040491	-	99	75.862	ENSRROG00000030771	LARP1B	73	55.967	Rhinopithecus_roxellana
ENSSSCG00000040491	-	94	70.652	ENSUAMG00000016938	-	99	57.519	Ursus_americanus