EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000040585 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Minus strand
Length: 1429 bases
Position: chr13:67613229-67614657
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000052944	Ribosomal_L1	PF00687.21	1.6e-13	1	1
ENSSSCP00000034373	Ribosomal_L1	PF00687.21	2.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000053501	-	462	-	ENSSSCP00000052944	153 (aa)	-	A0A287B9D4
ENSSSCT00000038997	-	375	-	ENSSSCP00000034373	124 (aa)	-	A0A286ZRV3

Gene Model

Click here to download ENSSSCG00000040585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000040585	-	69	77.907	ENSSSCG00000033380	-	61	77.907
ENSSSCG00000040585	-	69	79.070	ENSSSCG00000011206	-	77	61.111
ENSSSCG00000040585	-	73	76.667	ENSSSCG00000015831	-	78	77.528
ENSSSCG00000040585	-	69	73.256	ENSSSCG00000039478	-	56	73.256
ENSSSCG00000040585	-	69	89.535	ENSSSCG00000001543	RPL10A	90	64.780
ENSSSCG00000040585	-	69	77.907	ENSSSCG00000036088	-	61	77.907

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040585	-	69	72.093	ENSANAG00000038119	-	92	57.143	Aotus_nancymaae
ENSSSCG00000040585	-	81	55.833	ENSFCAG00000041512	-	55	66.667	Felis_catus
ENSSSCG00000040585	-	69	82.759	ENSFCAG00000030405	-	70	69.178	Felis_catus
ENSSSCG00000040585	-	69	73.256	ENSGGOG00000027388	-	73	59.211	Gorilla_gorilla
ENSSSCG00000040585	-	69	65.116	ENSPEMG00000011160	-	70	50.000	Peromyscus_maniculatus_bairdii
ENSSSCG00000040585	-	69	82.558	ENSSBOG00000029918	-	92	61.538	Saimiri_boliviensis_boliviensis