EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000040799 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 5273 bases
Position: chr4:105729948-105735220
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000036007	RRM_1	PF00076.22	2.3e-23	1	2
ENSSSCP00000036007	RRM_1	PF00076.22	2.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000051998	-	510	-	ENSSSCP00000036007	169 (aa)	-	A0A286ZWK8

Gene Model

Click here to download ENSSSCG00000040799's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000040799	-	68	42.000	ENSSSCG00000021591	-	82	42.000
ENSSSCG00000040799	-	89	45.161	ENSSSCG00000038505	MSI2	58	45.161
ENSSSCG00000040799	-	84	34.965	ENSSSCG00000001932	-	53	34.965
ENSSSCG00000040799	-	87	31.250	ENSSSCG00000012473	-	52	31.613
ENSSSCG00000040799	-	88	78.261	ENSSSCG00000000288	HNRNPA1	50	78.261
ENSSSCG00000040799	-	85	34.921	ENSSSCG00000022528	DAZAP1	51	34.921
ENSSSCG00000040799	-	92	55.357	ENSSSCG00000033138	-	53	55.357
ENSSSCG00000040799	-	87	35.625	ENSSSCG00000014031	-	51	35.625
ENSSSCG00000040799	-	83	77.869	ENSSSCG00000036350	HNRNPA2B1	58	70.000
ENSSSCG00000040799	-	90	38.506	ENSSSCG00000009249	HNRNPD	55	38.506
ENSSSCG00000040799	-	67	48.077	ENSSSCG00000013427	CIRBP	50	48.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040799	-	88	75.776	ENSANAG00000030267	-	65	76.220	Aotus_nancymaae
ENSSSCG00000040799	-	96	85.455	ENSANAG00000033364	-	57	85.455	Aotus_nancymaae
ENSSSCG00000040799	-	94	86.628	ENSANAG00000031609	-	51	86.628	Aotus_nancymaae
ENSSSCG00000040799	-	89	75.796	ENSBTAG00000048345	-	64	75.796	Bos_taurus
ENSSSCG00000040799	-	92	84.810	ENSBTAG00000052891	-	55	84.810	Bos_taurus
ENSSSCG00000040799	-	90	79.394	ENSCJAG00000041746	-	62	79.394	Callithrix_jacchus
ENSSSCG00000040799	-	89	88.344	ENSCJAG00000023383	-	61	88.485	Callithrix_jacchus
ENSSSCG00000040799	-	89	88.344	ENSCAFG00020006299	-	74	82.418	Canis_lupus_dingo
ENSSSCG00000040799	-	99	76.744	ENSCHIG00000011332	-	68	76.744	Capra_hircus
ENSSSCG00000040799	-	89	88.344	ENSCHIG00000015430	-	57	82.418	Capra_hircus
ENSSSCG00000040799	-	100	70.879	ENSTSYG00000036821	-	54	70.879	Carlito_syrichta
ENSSSCG00000040799	-	83	70.130	ENSTSYG00000031426	-	51	70.130	Carlito_syrichta
ENSSSCG00000040799	-	85	91.339	ENSCAPG00000013321	-	66	91.339	Cavia_aperea
ENSSSCG00000040799	-	89	88.344	ENSCPOG00000004251	HNRNPA3	57	82.418	Cavia_porcellus
ENSSSCG00000040799	-	83	81.148	ENSCCAG00000031612	-	53	81.148	Cebus_capucinus
ENSSSCG00000040799	-	93	73.410	ENSCCAG00000020722	-	50	77.987	Cebus_capucinus
ENSSSCG00000040799	-	100	77.907	ENSCCAG00000037906	-	68	77.907	Cebus_capucinus
ENSSSCG00000040799	-	100	65.385	ENSCCAG00000028618	-	65	66.484	Cebus_capucinus
ENSSSCG00000040799	-	90	72.121	ENSCATG00000041727	-	59	70.909	Cercocebus_atys
ENSSSCG00000040799	-	88	84.106	ENSCATG00000045141	-	51	84.416	Cercocebus_atys
ENSSSCG00000040799	-	89	88.415	ENSCLAG00000012855	HNRNPA3	64	88.415	Chinchilla_lanigera
ENSSSCG00000040799	-	90	79.518	ENSCANG00000041842	-	59	79.518	Colobus_angolensis_palliatus
ENSSSCG00000040799	-	88	81.366	ENSCGRG00001000079	-	60	81.366	Cricetulus_griseus_chok1gshd
ENSSSCG00000040799	-	89	88.344	ENSCGRG00001008592	Hnrnpa3	57	82.418	Cricetulus_griseus_chok1gshd
ENSSSCG00000040799	-	91	79.394	ENSCGRG00001000392	-	54	79.394	Cricetulus_griseus_chok1gshd
ENSSSCG00000040799	-	98	67.251	ENSCGRG00001000756	-	52	67.251	Cricetulus_griseus_chok1gshd
ENSSSCG00000040799	-	99	67.241	ENSCGRG00000006419	-	50	73.026	Cricetulus_griseus_crigri
ENSSSCG00000040799	-	89	88.415	ENSCGRG00000002408	Hnrnpa3	64	88.415	Cricetulus_griseus_crigri
ENSSSCG00000040799	-	88	72.671	ENSCGRG00000011128	-	51	72.671	Cricetulus_griseus_crigri
ENSSSCG00000040799	-	88	79.630	ENSCGRG00000012749	-	65	79.630	Cricetulus_griseus_crigri
ENSSSCG00000040799	-	88	52.229	ENSCSEG00000003421	hnrnpa0b	50	51.899	Cynoglossus_semilaevis
ENSSSCG00000040799	-	91	74.096	ENSCSEG00000005613	HNRNPA3	53	74.096	Cynoglossus_semilaevis
ENSSSCG00000040799	-	83	52.941	ENSDARG00000089302	hnrnpa0a	50	52.941	Danio_rerio
ENSSSCG00000040799	-	83	52.941	ENSDARG00000036161	hnrnpa0l	51	52.941	Danio_rerio
ENSSSCG00000040799	-	83	52.941	ENSDARG00000036162	hnrnpa0b	74	56.250	Danio_rerio
ENSSSCG00000040799	-	100	68.927	ENSDNOG00000044709	-	57	68.927	Dasypus_novemcinctus
ENSSSCG00000040799	-	91	86.145	ENSDORG00000028671	-	50	86.145	Dipodomys_ordii
ENSSSCG00000040799	-	85	88.660	ENSDORG00000024966	-	64	82.803	Dipodomys_ordii
ENSSSCG00000040799	-	100	55.435	ENSETEG00000012195	-	69	55.435	Echinops_telfairi
ENSSSCG00000040799	-	90	64.848	ENSETEG00000011413	-	71	64.848	Echinops_telfairi
ENSSSCG00000040799	-	88	55.901	ENSETEG00000017220	-	62	55.901	Echinops_telfairi
ENSSSCG00000040799	-	88	57.516	ENSEASG00005020591	-	62	57.516	Equus_asinus_asinus
ENSSSCG00000040799	-	89	88.344	ENSEASG00005022530	HNRNPA3	69	82.418	Equus_asinus_asinus
ENSSSCG00000040799	-	87	65.625	ENSEEUG00000003036	-	62	65.625	Erinaceus_europaeus
ENSSSCG00000040799	-	88	76.398	ENSEEUG00000000925	-	63	76.398	Erinaceus_europaeus
ENSSSCG00000040799	-	90	78.182	ENSFCAG00000033796	-	57	78.182	Felis_catus
ENSSSCG00000040799	-	91	72.289	ENSFHEG00000007482	HNRNPA3	50	72.289	Fundulus_heteroclitus
ENSSSCG00000040799	-	91	72.289	ENSGAFG00000004116	HNRNPA3	50	72.289	Gambusia_affinis
ENSSSCG00000040799	-	88	55.556	ENSGACG00000016447	hnrnpa0b	60	55.556	Gasterosteus_aculeatus
ENSSSCG00000040799	-	85	92.784	ENSGGOG00000022020	-	77	82.500	Gorilla_gorilla
ENSSSCG00000040799	-	90	68.519	ENSGGOG00000039142	-	59	68.519	Gorilla_gorilla
ENSSSCG00000040799	-	89	75.658	ENSGGOG00000040721	-	51	75.658	Gorilla_gorilla
ENSSSCG00000040799	-	91	83.735	ENSHGLG00000018499	-	50	83.735	Heterocephalus_glaber_female
ENSSSCG00000040799	-	90	86.667	ENSHGLG00000012306	-	73	80.769	Heterocephalus_glaber_female
ENSSSCG00000040799	-	90	80.606	ENSHGLG00000014107	-	55	80.982	Heterocephalus_glaber_female
ENSSSCG00000040799	-	89	88.344	ENSHGLG00000005451	HNRNPA3	57	82.418	Heterocephalus_glaber_female
ENSSSCG00000040799	-	89	88.344	ENSHGLG00100010504	-	57	82.418	Heterocephalus_glaber_male
ENSSSCG00000040799	-	92	74.405	ENSHCOG00000000313	HNRNPA3	51	74.405	Hippocampus_comes
ENSSSCG00000040799	-	90	82.424	ENSSTOG00000025292	-	61	82.822	Ictidomys_tridecemlineatus
ENSSSCG00000040799	-	89	88.344	ENSSTOG00000025125	HNRNPA3	57	82.418	Ictidomys_tridecemlineatus
ENSSSCG00000040799	-	88	57.516	ENSSTOG00000028543	-	59	57.516	Ictidomys_tridecemlineatus
ENSSSCG00000040799	-	91	88.554	ENSJJAG00000018392	-	51	88.554	Jaculus_jaculus
ENSSSCG00000040799	-	89	88.344	ENSJJAG00000000149	Hnrnpa3	57	82.418	Jaculus_jaculus
ENSSSCG00000040799	-	88	57.516	ENSLAFG00000028290	-	66	57.516	Loxodonta_africana
ENSSSCG00000040799	-	91	83.133	ENSMFAG00000037149	-	87	83.133	Macaca_fascicularis
ENSSSCG00000040799	-	90	75.758	ENSMFAG00000031209	-	68	75.758	Macaca_fascicularis
ENSSSCG00000040799	-	90	82.424	ENSMFAG00000032902	-	60	82.424	Macaca_fascicularis
ENSSSCG00000040799	-	89	88.344	ENSMMUG00000001858	-	66	82.418	Macaca_mulatta
ENSSSCG00000040799	-	90	76.970	ENSMMUG00000045923	-	56	76.506	Macaca_mulatta
ENSSSCG00000040799	-	88	83.951	ENSMNEG00000042504	-	65	84.242	Macaca_nemestrina
ENSSSCG00000040799	-	90	72.727	ENSMNEG00000039618	-	70	72.727	Macaca_nemestrina
ENSSSCG00000040799	-	90	84.242	ENSMLEG00000032671	-	52	84.242	Mandrillus_leucophaeus
ENSSSCG00000040799	-	91	72.892	ENSMAMG00000006307	HNRNPA3	51	72.892	Mastacembelus_armatus
ENSSSCG00000040799	-	90	86.061	ENSMGAG00000009565	HNRNPA3	67	86.061	Meleagris_gallopavo
ENSSSCG00000040799	-	88	58.170	ENSMGAG00000007915	-	84	58.170	Meleagris_gallopavo
ENSSSCG00000040799	-	94	74.419	ENSMAUG00000015650	-	51	74.096	Mesocricetus_auratus
ENSSSCG00000040799	-	89	88.344	ENSMOCG00000019409	-	70	82.418	Microtus_ochrogaster
ENSSSCG00000040799	-	88	57.516	ENSMOCG00000021968	-	75	57.516	Microtus_ochrogaster
ENSSSCG00000040799	-	85	75.159	ENSMMOG00000000540	HNRNPA3	52	75.159	Mola_mola
ENSSSCG00000040799	-	88	56.863	ENSMALG00000008866	hnrnpa0b	56	56.863	Monopterus_albus
ENSSSCG00000040799	-	91	88.554	ENSMUSG00000059005	Hnrnpa3	57	82.418	Mus_musculus
ENSSSCG00000040799	-	100	82.418	ENSMPUG00000014103	-	76	82.418	Mustela_putorius_furo
ENSSSCG00000040799	-	91	87.349	ENSMPUG00000018063	-	61	87.349	Mustela_putorius_furo
ENSSSCG00000040799	-	89	88.344	ENSMLUG00000003906	-	52	88.485	Myotis_lucifugus
ENSSSCG00000040799	-	89	88.344	ENSNGAG00000021745	Hnrnpa3	57	82.418	Nannospalax_galili
ENSSSCG00000040799	-	93	72.189	ENSNLEG00000032894	-	60	72.189	Nomascus_leucogenys
ENSSSCG00000040799	-	91	83.133	ENSNLEG00000015913	-	63	78.022	Nomascus_leucogenys
ENSSSCG00000040799	-	90	82.581	ENSNLEG00000034545	-	62	82.581	Nomascus_leucogenys
ENSSSCG00000040799	-	90	85.455	ENSNLEG00000010858	-	65	79.670	Nomascus_leucogenys
ENSSSCG00000040799	-	80	55.147	ENSMEUG00000008352	-	79	55.147	Notamacropus_eugenii
ENSSSCG00000040799	-	90	87.273	ENSODEG00000006322	-	60	87.273	Octodon_degus
ENSSSCG00000040799	-	88	61.481	ENSOANG00000012169	-	59	61.481	Ornithorhynchus_anatinus
ENSSSCG00000040799	-	100	73.514	ENSOCUG00000006431	-	72	73.514	Oryctolagus_cuniculus
ENSSSCG00000040799	-	88	57.516	ENSOCUG00000005703	-	72	57.516	Oryctolagus_cuniculus
ENSSSCG00000040799	-	89	88.344	ENSOCUG00000002743	-	52	88.485	Oryctolagus_cuniculus
ENSSSCG00000040799	-	89	84.756	ENSOGAG00000032165	-	56	84.756	Otolemur_garnettii
ENSSSCG00000040799	-	91	64.881	ENSOGAG00000025284	-	50	64.881	Otolemur_garnettii
ENSSSCG00000040799	-	91	81.325	ENSOGAG00000030687	-	51	81.325	Otolemur_garnettii
ENSSSCG00000040799	-	97	72.892	ENSPPAG00000040384	-	51	71.512	Pan_paniscus
ENSSSCG00000040799	-	99	78.333	ENSPPAG00000030037	-	71	78.333	Pan_paniscus
ENSSSCG00000040799	-	100	79.651	ENSPPAG00000035899	-	66	79.651	Pan_paniscus
ENSSSCG00000040799	-	85	78.981	ENSPPRG00000015090	-	62	78.981	Panthera_pardus
ENSSSCG00000040799	-	90	67.879	ENSPPRG00000009266	-	53	67.879	Panthera_pardus
ENSSSCG00000040799	-	89	81.707	ENSPPRG00000022001	-	63	81.707	Panthera_pardus
ENSSSCG00000040799	-	90	68.485	ENSPTIG00000021689	-	53	68.485	Panthera_tigris_altaica
ENSSSCG00000040799	-	97	72.289	ENSPTRG00000051354	-	50	70.930	Pan_troglodytes
ENSSSCG00000040799	-	93	82.456	ENSPTRG00000052291	-	67	82.456	Pan_troglodytes
ENSSSCG00000040799	-	99	78.333	ENSPTRG00000018253	-	62	78.333	Pan_troglodytes
ENSSSCG00000040799	-	100	79.651	ENSPTRG00000052830	-	66	79.651	Pan_troglodytes
ENSSSCG00000040799	-	83	69.935	ENSPANG00000019564	-	50	69.935	Papio_anubis
ENSSSCG00000040799	-	91	87.349	ENSPANG00000013447	-	54	87.349	Papio_anubis
ENSSSCG00000040799	-	100	72.928	ENSPANG00000022665	-	59	72.928	Papio_anubis
ENSSSCG00000040799	-	90	87.273	ENSPSIG00000003011	HNRNPA3	50	87.273	Pelodiscus_sinensis
ENSSSCG00000040799	-	88	58.170	ENSPSIG00000000035	-	58	58.170	Pelodiscus_sinensis
ENSSSCG00000040799	-	91	86.145	ENSPEMG00000018087	-	54	86.145	Peromyscus_maniculatus_bairdii
ENSSSCG00000040799	-	91	88.554	ENSPCIG00000025443	HNRNPA3	50	88.554	Phascolarctos_cinereus
ENSSSCG00000040799	-	91	71.084	ENSPLAG00000009033	HNRNPA3	56	73.585	Poecilia_latipinna
ENSSSCG00000040799	-	90	80.488	ENSPPYG00000001326	-	84	80.488	Pongo_abelii
ENSSSCG00000040799	-	90	82.803	ENSPPYG00000013564	-	52	82.803	Pongo_abelii
ENSSSCG00000040799	-	87	67.500	ENSPPYG00000003382	-	61	67.500	Pongo_abelii
ENSSSCG00000040799	-	85	80.128	ENSPPYG00000016683	-	64	80.128	Pongo_abelii
ENSSSCG00000040799	-	100	65.385	ENSPCOG00000020527	-	68	65.385	Propithecus_coquereli
ENSSSCG00000040799	-	92	77.515	ENSRBIG00000036332	-	75	77.515	Rhinopithecus_bieti
ENSSSCG00000040799	-	88	56.051	ENSSBOG00000034299	-	58	56.051	Saimiri_boliviensis_boliviensis
ENSSSCG00000040799	-	95	75.155	ENSSBOG00000021287	-	59	75.155	Saimiri_boliviensis_boliviensis
ENSSSCG00000040799	-	89	88.415	ENSSHAG00000018255	HNRNPA3	51	88.415	Sarcophilus_harrisii
ENSSSCG00000040799	-	88	73.457	ENSSLDG00000018999	HNRNPA3	51	73.457	Seriola_lalandi_dorsalis
ENSSSCG00000040799	-	88	81.988	ENSSARG00000007605	-	63	81.988	Sorex_araneus
ENSSSCG00000040799	-	90	86.061	ENSSPUG00000005423	HNRNPA3	50	86.061	Sphenodon_punctatus
ENSSSCG00000040799	-	88	54.717	ENSSPAG00000021157	-	71	55.414	Stegastes_partitus
ENSSSCG00000040799	-	88	54.717	ENSSPAG00000001196	-	71	55.414	Stegastes_partitus
ENSSSCG00000040799	-	89	86.585	ENSTGUG00000008996	HNRNPA3	51	86.585	Taeniopygia_guttata
ENSSSCG00000040799	-	88	54.902	ENSTRUG00000015362	hnrnpa0b	58	54.902	Takifugu_rubripes
ENSSSCG00000040799	-	88	70.186	ENSTBEG00000017108	-	64	70.186	Tupaia_belangeri
ENSSSCG00000040799	-	85	95.902	ENSUMAG00000015686	-	80	95.902	Ursus_maritimus
ENSSSCG00000040799	-	89	75.926	ENSVVUG00000012340	-	73	71.271	Vulpes_vulpes
ENSSSCG00000040799	-	100	67.582	ENSVVUG00000014827	-	58	72.727	Vulpes_vulpes