EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSSCG00000040926 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 1065 bases
Position: chr2:72038204-72039268
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000014406	RRM_1	PF00076.22	1.1e-26	1	2
ENSSSCP00000014406	RRM_1	PF00076.22	1.1e-26	2	2
ENSSSCP00000014406	HnRNPA1	PF11627.8	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000014807	-	1065	-	ENSSSCP00000014406	354 (aa)	-	F1SCM6

Gene Model

Click here to download ENSSSCG00000040926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSSCG00000040926	-	98	49.716	ENSSSCG00000013611	-	66	54.065
ENSSSCG00000040926	-	55	38.674	ENSSSCG00000029365	MSI1	52	38.674
ENSSSCG00000040926	-	52	52.174	ENSSSCG00000036878	-	57	50.505
ENSSSCG00000040926	-	100	73.034	ENSSSCG00000013607	-	69	76.016
ENSSSCG00000040926	-	100	99.718	ENSSSCG00000033635	-	100	99.718
ENSSSCG00000040926	-	60	30.233	ENSSSCG00000012473	-	67	30.049
ENSSSCG00000040926	-	50	67.222	ENSSSCG00000015988	HNRNPA3	56	65.789
ENSSSCG00000040926	-	54	66.839	ENSSSCG00000012503	-	57	67.172
ENSSSCG00000040926	-	95	59.885	ENSSSCG00000036350	HNRNPA2B1	93	74.174
ENSSSCG00000040926	-	50	67.039	ENSSSCG00000000288	HNRNPA1	64	63.235
ENSSSCG00000040926	-	50	36.634	ENSSSCG00000022528	DAZAP1	52	36.634
ENSSSCG00000040926	-	78	38.129	ENSSSCG00000033138	-	55	41.579
ENSSSCG00000040926	-	53	34.659	ENSSSCG00000014031	-	61	33.684
ENSSSCG00000040926	-	66	36.073	ENSSSCG00000038505	MSI2	59	37.158

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040926	-	50	49.438	ENSG00000177733	HNRNPA0	64	48.205	Homo_sapiens
ENSSSCG00000040926	-	59	53.846	ENSAPOG00000014678	-	91	48.810	Acanthochromis_polyacanthus
ENSSSCG00000040926	-	55	62.245	ENSAPOG00000003641	hnrnpa3	74	64.021	Acanthochromis_polyacanthus
ENSSSCG00000040926	-	55	62.245	ENSAPOG00000003688	hnrnpa3	57	59.809	Acanthochromis_polyacanthus
ENSSSCG00000040926	-	50	51.685	ENSAPOG00000003387	HNRNPA0	68	49.231	Acanthochromis_polyacanthus
ENSSSCG00000040926	-	50	49.162	ENSAMEG00000016316	HNRNPA0	63	48.205	Ailuropoda_melanoleuca
ENSSSCG00000040926	-	63	42.857	ENSACIG00000021834	HNRNPA0	90	46.078	Amphilophus_citrinellus
ENSSSCG00000040926	-	54	63.212	ENSAOCG00000004095	hnrnpa3	56	60.386	Amphiprion_ocellaris
ENSSSCG00000040926	-	54	63.212	ENSAPEG00000022522	hnrnpa3	57	59.809	Amphiprion_percula
ENSSSCG00000040926	-	54	63.212	ENSATEG00000015304	hnrnpa3	58	63.212	Anabas_testudineus
ENSSSCG00000040926	-	50	48.603	ENSANAG00000017086	HNRNPA0	63	47.692	Aotus_nancymaae
ENSSSCG00000040926	-	50	65.730	ENSANAG00000037918	-	53	64.362	Aotus_nancymaae
ENSSSCG00000040926	-	53	64.211	ENSACLG00000008532	hnrnpa3	57	64.211	Astatotilapia_calliptera
ENSSSCG00000040926	-	50	49.162	ENSBTAG00000016929	HNRNPA0	62	48.205	Bos_taurus
ENSSSCG00000040926	-	55	61.140	ENSCJAG00000013830	-	56	59.314	Callithrix_jacchus
ENSSSCG00000040926	-	50	49.162	ENSCAFG00000001132	HNRNPA0	63	48.205	Canis_familiaris
ENSSSCG00000040926	-	50	49.162	ENSCAFG00020008142	HNRNPA0	63	48.205	Canis_lupus_dingo
ENSSSCG00000040926	-	50	49.162	ENSCHIG00000002602	HNRNPA0	64	48.205	Capra_hircus
ENSSSCG00000040926	-	50	48.603	ENSCPOG00000026092	HNRNPA0	65	47.692	Cavia_porcellus
ENSSSCG00000040926	-	50	58.757	ENSCATG00000038569	-	56	56.477	Cercocebus_atys
ENSSSCG00000040926	-	50	48.603	ENSCLAG00000015132	HNRNPA0	61	49.432	Chinchilla_lanigera
ENSSSCG00000040926	-	50	49.438	ENSCSAG00000000499	HNRNPA0	64	48.205	Chlorocebus_sabaeus
ENSSSCG00000040926	-	50	55.618	ENSCING00000013663	-	50	53.439	Ciona_intestinalis
ENSSSCG00000040926	-	50	49.438	ENSCANG00000038062	HNRNPA0	63	48.205	Colobus_angolensis_palliatus
ENSSSCG00000040926	-	50	65.730	ENSCANG00000017881	-	52	62.245	Colobus_angolensis_palliatus
ENSSSCG00000040926	-	69	50.612	ENSCGRG00000003686	-	88	46.795	Cricetulus_griseus_crigri
ENSSSCG00000040926	-	53	65.263	ENSCVAG00000018995	hnrnpa3	56	64.583	Cyprinodon_variegatus
ENSSSCG00000040926	-	52	65.054	ENSDARG00000059351	hnrnpa3	80	63.731	Danio_rerio
ENSSSCG00000040926	-	50	49.162	ENSDNOG00000030903	HNRNPA0	62	48.205	Dasypus_novemcinctus
ENSSSCG00000040926	-	67	45.055	ENSEBUG00000007989	-	58	46.995	Eptatretus_burgeri
ENSSSCG00000040926	-	52	59.893	ENSEBUG00000016570	HNRNPA0	89	52.396	Eptatretus_burgeri
ENSSSCG00000040926	-	50	56.983	ENSEBUG00000009297	HNRNPA0	90	46.341	Eptatretus_burgeri
ENSSSCG00000040926	-	60	58.879	ENSELUG00000023080	hnrnpa3	86	49.655	Esox_lucius
ENSSSCG00000040926	-	50	49.162	ENSFCAG00000040261	HNRNPA0	64	48.205	Felis_catus
ENSSSCG00000040926	-	50	49.721	ENSFALG00000014395	HNRNPA0	57	48.705	Ficedula_albicollis
ENSSSCG00000040926	-	53	54.211	ENSFDAG00000000331	-	51	53.333	Fukomys_damarensis
ENSSSCG00000040926	-	50	55.556	ENSFDAG00000014067	-	58	53.500	Fukomys_damarensis
ENSSSCG00000040926	-	50	49.162	ENSFDAG00000019780	HNRNPA0	80	47.179	Fukomys_damarensis
ENSSSCG00000040926	-	50	51.124	ENSFDAG00000018739	-	69	50.515	Fukomys_damarensis
ENSSSCG00000040926	-	54	51.250	ENSFHEG00000008384	HNRNPA0	81	51.250	Fundulus_heteroclitus
ENSSSCG00000040926	-	51	45.109	ENSFHEG00000008390	HNRNPA0	57	43.878	Fundulus_heteroclitus
ENSSSCG00000040926	-	50	49.721	ENSGALG00000006160	HNRNPA0	61	48.128	Gallus_gallus
ENSSSCG00000040926	-	54	61.140	ENSGACG00000004477	hnrnpa3	66	59.898	Gasterosteus_aculeatus
ENSSSCG00000040926	-	54	50.000	ENSHBUG00000023868	HNRNPA0	74	48.947	Haplochromis_burtoni
ENSSSCG00000040926	-	53	64.211	ENSHBUG00000019734	hnrnpa3	57	64.211	Haplochromis_burtoni
ENSSSCG00000040926	-	50	49.162	ENSHGLG00000018216	HNRNPA0	65	48.205	Heterocephalus_glaber_female
ENSSSCG00000040926	-	68	47.934	ENSHGLG00000014577	-	77	49.174	Heterocephalus_glaber_female
ENSSSCG00000040926	-	59	58.294	ENSHGLG00100001336	-	52	62.366	Heterocephalus_glaber_male
ENSSSCG00000040926	-	59	59.242	ENSHGLG00100006677	-	58	63.441	Heterocephalus_glaber_male
ENSSSCG00000040926	-	54	50.595	ENSHCOG00000007174	HNRNPA0	91	50.595	Hippocampus_comes
ENSSSCG00000040926	-	50	50.000	ENSSTOG00000019374	-	50	47.980	Ictidomys_tridecemlineatus
ENSSSCG00000040926	-	54	63.212	ENSKMAG00000015973	hnrnpa3	57	63.212	Kryptolebias_marmoratus
ENSSSCG00000040926	-	53	64.211	ENSLBEG00000016767	hnrnpa3	57	64.211	Labrus_bergylta
ENSSSCG00000040926	-	50	49.438	ENSLACG00000014480	HNRNPA0	59	49.438	Latimeria_chalumnae
ENSSSCG00000040926	-	51	65.934	ENSLACG00000008189	hnrnpa3	53	64.211	Latimeria_chalumnae
ENSSSCG00000040926	-	51	66.667	ENSLOCG00000006476	-	90	49.857	Lepisosteus_oculatus
ENSSSCG00000040926	-	50	67.778	ENSLOCG00000006986	hnrnpa3	54	65.789	Lepisosteus_oculatus
ENSSSCG00000040926	-	50	49.438	ENSMFAG00000030522	HNRNPA0	63	48.205	Macaca_fascicularis
ENSSSCG00000040926	-	50	57.542	ENSMMUG00000031232	-	56	55.385	Macaca_mulatta
ENSSSCG00000040926	-	50	49.438	ENSMNEG00000015863	HNRNPA0	63	48.205	Macaca_nemestrina
ENSSSCG00000040926	-	73	44.615	ENSMNEG00000038943	-	93	44.048	Macaca_nemestrina
ENSSSCG00000040926	-	50	48.889	ENSMLEG00000026629	HNRNPA0	63	48.205	Mandrillus_leucophaeus
ENSSSCG00000040926	-	50	58.192	ENSMLEG00000033415	-	56	55.959	Mandrillus_leucophaeus
ENSSSCG00000040926	-	74	42.481	ENSMAMG00000017754	HNRNPA0	75	50.000	Mastacembelus_armatus
ENSSSCG00000040926	-	53	64.211	ENSMZEG00005004663	hnrnpa3	59	62.564	Maylandia_zebra
ENSSSCG00000040926	-	50	48.603	ENSMAUG00000018485	Hnrnpa0	58	49.432	Mesocricetus_auratus
ENSSSCG00000040926	-	50	49.162	ENSMODG00000014720	HNRNPA0	67	50.000	Monodelphis_domestica
ENSSSCG00000040926	-	50	48.889	ENSMODG00000002463	-	96	48.889	Monodelphis_domestica
ENSSSCG00000040926	-	59	55.450	ENSMODG00000024570	-	54	57.576	Monodelphis_domestica
ENSSSCG00000040926	-	61	59.361	ENSMALG00000009691	hnrnpa3	77	64.481	Monopterus_albus
ENSSSCG00000040926	-	50	49.162	ENSMPUG00000019790	HNRNPA0	63	48.205	Mustela_putorius_furo
ENSSSCG00000040926	-	50	49.162	ENSMLUG00000012683	-	57	50.000	Myotis_lucifugus
ENSSSCG00000040926	-	50	51.648	ENSNGAG00000001008	-	52	51.042	Nannospalax_galili
ENSSSCG00000040926	-	50	62.222	ENSNLEG00000027151	-	54	61.053	Nomascus_leucogenys
ENSSSCG00000040926	-	50	48.889	ENSNLEG00000008518	HNRNPA0	63	48.205	Nomascus_leucogenys
ENSSSCG00000040926	-	50	48.603	ENSMEUG00000013675	HNRNPA0	58	49.432	Notamacropus_eugenii
ENSSSCG00000040926	-	50	65.556	ENSODEG00000016578	-	72	60.606	Octodon_degus
ENSSSCG00000040926	-	58	43.353	ENSORLG00000027074	-	88	43.353	Oryzias_latipes
ENSSSCG00000040926	-	57	61.275	ENSORLG00000017561	hnrnpa3	57	62.887	Oryzias_latipes
ENSSSCG00000040926	-	68	37.449	ENSORLG00000025332	-	59	43.478	Oryzias_latipes
ENSSSCG00000040926	-	68	37.449	ENSORLG00000025015	-	59	43.478	Oryzias_latipes
ENSSSCG00000040926	-	57	61.275	ENSORLG00020020788	hnrnpa3	57	62.887	Oryzias_latipes_hni
ENSSSCG00000040926	-	54	44.186	ENSORLG00020008203	-	58	44.186	Oryzias_latipes_hni
ENSSSCG00000040926	-	50	42.697	ENSORLG00020007109	-	57	42.697	Oryzias_latipes_hni
ENSSSCG00000040926	-	50	43.889	ENSORLG00020022487	-	60	45.665	Oryzias_latipes_hni
ENSSSCG00000040926	-	53	64.211	ENSORLG00015014774	hnrnpa3	57	62.887	Oryzias_latipes_hsok
ENSSSCG00000040926	-	54	43.931	ENSORLG00015015182	-	77	43.750	Oryzias_latipes_hsok
ENSSSCG00000040926	-	58	43.750	ENSORLG00015016507	-	64	43.750	Oryzias_latipes_hsok
ENSSSCG00000040926	-	53	38.150	ENSORLG00015016236	HNRNPA0	58	38.255	Oryzias_latipes_hsok
ENSSSCG00000040926	-	58	42.775	ENSORLG00015016169	HNRNPA0	59	42.775	Oryzias_latipes_hsok
ENSSSCG00000040926	-	50	45.556	ENSORLG00015016302	HNRNPA0	61	45.078	Oryzias_latipes_hsok
ENSSSCG00000040926	-	90	36.842	ENSORLG00015017144	-	59	44.068	Oryzias_latipes_hsok
ENSSSCG00000040926	-	55	42.135	ENSORLG00015015185	-	59	43.023	Oryzias_latipes_hsok
ENSSSCG00000040926	-	58	41.758	ENSORLG00015016157	-	63	41.758	Oryzias_latipes_hsok
ENSSSCG00000040926	-	53	64.211	ENSOMEG00000004838	hnrnpa3	58	62.887	Oryzias_melastigma
ENSSSCG00000040926	-	50	49.162	ENSOGAG00000025754	HNRNPA0	74	50.000	Otolemur_garnettii
ENSSSCG00000040926	-	50	49.438	ENSPPAG00000005303	HNRNPA0	63	48.205	Pan_paniscus
ENSSSCG00000040926	-	50	49.162	ENSPPRG00000014655	HNRNPA0	64	48.205	Panthera_pardus
ENSSSCG00000040926	-	50	49.438	ENSPTRG00000017273	HNRNPA0	63	48.205	Pan_troglodytes
ENSSSCG00000040926	-	50	48.889	ENSPANG00000012900	HNRNPA0	63	48.205	Papio_anubis
ENSSSCG00000040926	-	65	53.731	ENSPKIG00000022916	hnrnpa3	68	65.263	Paramormyrops_kingsleyae
ENSSSCG00000040926	-	50	52.247	ENSPKIG00000020281	-	57	51.295	Paramormyrops_kingsleyae
ENSSSCG00000040926	-	52	63.978	ENSPMGG00000000747	hnrnpa3	73	66.667	Periophthalmus_magnuspinnatus
ENSSSCG00000040926	-	51	65.934	ENSPMAG00000004449	-	78	65.934	Petromyzon_marinus
ENSSSCG00000040926	-	58	50.988	ENSPFOG00000014049	hnrnpa3	58	63.731	Poecilia_formosa
ENSSSCG00000040926	-	58	50.988	ENSPMEG00000006390	hnrnpa3	58	63.731	Poecilia_mexicana
ENSSSCG00000040926	-	54	63.731	ENSPREG00000005411	hnrnpa3	63	64.021	Poecilia_reticulata
ENSSSCG00000040926	-	50	49.438	ENSPPYG00000015814	HNRNPA0	64	48.205	Pongo_abelii
ENSSSCG00000040926	-	50	63.889	ENSPPYG00000001012	-	61	62.632	Pongo_abelii
ENSSSCG00000040926	-	50	66.480	ENSPNYG00000008424	hnrnpa3	94	51.880	Pundamilia_nyererei
ENSSSCG00000040926	-	50	49.438	ENSRBIG00000023673	HNRNPA0	64	48.205	Rhinopithecus_bieti
ENSSSCG00000040926	-	50	49.438	ENSRROG00000002558	HNRNPA0	64	48.205	Rhinopithecus_roxellana
ENSSSCG00000040926	-	59	50.467	ENSRROG00000034643	-	58	51.813	Rhinopithecus_roxellana
ENSSSCG00000040926	-	53	65.426	ENSSFOG00015001814	hnrnpa3	53	65.263	Scleropages_formosus
ENSSSCG00000040926	-	51	66.120	ENSSFOG00015016280	hnrnpa1	91	53.704	Scleropages_formosus
ENSSSCG00000040926	-	54	61.658	ENSSMAG00000015218	hnrnpa3	58	57.759	Scophthalmus_maximus
ENSSSCG00000040926	-	54	62.694	ENSSDUG00000000381	hnrnpa3	61	62.963	Seriola_dumerili
ENSSSCG00000040926	-	50	49.162	ENSSPUG00000016613	HNRNPA0	62	48.438	Sphenodon_punctatus
ENSSSCG00000040926	-	54	62.694	ENSSPAG00000008969	hnrnpa3	58	62.694	Stegastes_partitus
ENSSSCG00000040926	-	53	45.503	ENSSPAG00000001272	-	54	44.175	Stegastes_partitus
ENSSSCG00000040926	-	60	57.477	ENSTRUG00000017504	hnrnpa3	57	62.105	Takifugu_rubripes
ENSSSCG00000040926	-	59	58.768	ENSTNIG00000016958	hnrnpa3	55	62.632	Tetraodon_nigroviridis
ENSSSCG00000040926	-	50	49.162	ENSTTRG00000000499	HNRNPA0	64	48.205	Tursiops_truncatus
ENSSSCG00000040926	-	50	49.162	ENSVVUG00000014736	HNRNPA0	63	48.205	Vulpes_vulpes
ENSSSCG00000040926	-	59	61.611	ENSXETG00000001806	hnrnpa3	51	65.789	Xenopus_tropicalis
ENSSSCG00000040926	-	53	47.340	ENSXETG00000003833	hnrnpa0	63	46.465	Xenopus_tropicalis
ENSSSCG00000040926	-	51	44.565	ENSXMAG00000029150	HNRNPA0	64	43.434	Xiphophorus_maculatus
ENSSSCG00000040926	-	53	64.737	ENSXMAG00000000439	hnrnpa3	57	64.737	Xiphophorus_maculatus