EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSSCG00000040954 (Gene tree)
Gene ID: 100622040
Gene Symbol: CSTF3
Alias: -
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Sus_scrofa
Status: putative
Strand: Plus strand
Length: 69672 bases
Position: chr2:27780195-27849866
Accession: 100622040
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSSCP00000058534	Suf	PF05843.14	8.7e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSSCT00000038062	-	2148	-	ENSSSCP00000058534	715 (aa)	-	A0A287BQU0

Gene Model

Click here to download ENSSSCG00000040954's gene model file

Pathways

Pathway ID	Pathway Name	Source
ssc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSSCG00000040954's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSSCG00000040954	CSTF3	100	99.302	ENSG00000176102	CSTF3	99	100.000	Homo_sapiens
ENSSSCG00000040954	CSTF3	99	91.164	ENSAPOG00000014054	cstf3	99	91.164	Acanthochromis_polyacanthus
ENSSSCG00000040954	CSTF3	99	99.438	ENSAMEG00000007187	CSTF3	99	99.438	Ailuropoda_melanoleuca
ENSSSCG00000040954	CSTF3	87	85.920	ENSACIG00000005539	cstf3	100	85.920	Amphilophus_citrinellus
ENSSSCG00000040954	CSTF3	99	90.884	ENSAOCG00000010930	cstf3	99	90.884	Amphiprion_ocellaris
ENSSSCG00000040954	CSTF3	99	90.884	ENSAPEG00000007903	cstf3	99	90.884	Amphiprion_percula
ENSSSCG00000040954	CSTF3	99	91.164	ENSATEG00000000190	cstf3	99	91.164	Anabas_testudineus
ENSSSCG00000040954	CSTF3	99	97.881	ENSAPLG00000007217	CSTF3	100	97.881	Anas_platyrhynchos
ENSSSCG00000040954	CSTF3	99	95.787	ENSACAG00000002823	CSTF3	99	95.787	Anolis_carolinensis
ENSSSCG00000040954	CSTF3	100	99.302	ENSANAG00000020699	CSTF3	100	99.840	Aotus_nancymaae
ENSSSCG00000040954	CSTF3	98	91.631	ENSACLG00000007820	cstf3	99	90.795	Astatotilapia_calliptera
ENSSSCG00000040954	CSTF3	100	90.377	ENSAMXG00000014198	cstf3	99	90.656	Astyanax_mexicanus
ENSSSCG00000040954	CSTF3	100	99.302	ENSBTAG00000008617	CSTF3	100	99.852	Bos_taurus
ENSSSCG00000040954	CSTF3	97	49.313	WBGene00006307	suf-1	99	49.383	Caenorhabditis_elegans
ENSSSCG00000040954	CSTF3	100	99.302	ENSCJAG00000005533	CSTF3	100	99.840	Callithrix_jacchus
ENSSSCG00000040954	CSTF3	100	99.302	ENSCAFG00000007264	CSTF3	99	99.302	Canis_familiaris
ENSSSCG00000040954	CSTF3	99	99.859	ENSCAFG00020002715	CSTF3	99	99.859	Canis_lupus_dingo
ENSSSCG00000040954	CSTF3	98	98.293	ENSCHIG00000016418	CSTF3	100	99.840	Capra_hircus
ENSSSCG00000040954	CSTF3	99	99.436	ENSTSYG00000000451	CSTF3	100	99.436	Carlito_syrichta
ENSSSCG00000040954	CSTF3	83	96.023	ENSCAPG00000010958	CSTF3	98	96.023	Cavia_aperea
ENSSSCG00000040954	CSTF3	100	99.022	ENSCPOG00000005545	CSTF3	100	98.878	Cavia_porcellus
ENSSSCG00000040954	CSTF3	100	99.302	ENSCCAG00000024790	CSTF3	100	99.840	Cebus_capucinus
ENSSSCG00000040954	CSTF3	100	99.302	ENSCATG00000007080	CSTF3	100	99.840	Cercocebus_atys
ENSSSCG00000040954	CSTF3	100	99.302	ENSCLAG00000016179	CSTF3	99	99.302	Chinchilla_lanigera
ENSSSCG00000040954	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSSSCG00000040954	CSTF3	99	97.195	ENSCPBG00000006753	CSTF3	99	97.195	Chrysemys_picta_bellii
ENSSSCG00000040954	CSTF3	99	61.958	ENSCING00000006401	-	98	61.958	Ciona_intestinalis
ENSSSCG00000040954	CSTF3	99	61.646	ENSCSAVG00000004851	-	100	61.646	Ciona_savignyi
ENSSSCG00000040954	CSTF3	100	99.302	ENSCANG00000035468	CSTF3	100	99.840	Colobus_angolensis_palliatus
ENSSSCG00000040954	CSTF3	100	98.883	ENSCGRG00001014773	Cstf3	99	99.435	Cricetulus_griseus_chok1gshd
ENSSSCG00000040954	CSTF3	100	98.883	ENSCGRG00000004142	Cstf3	99	99.435	Cricetulus_griseus_crigri
ENSSSCG00000040954	CSTF3	100	90.642	ENSCSEG00000014283	cstf3	99	90.642	Cynoglossus_semilaevis
ENSSSCG00000040954	CSTF3	99	90.042	ENSCVAG00000019739	cstf3	99	90.042	Cyprinodon_variegatus
ENSSSCG00000040954	CSTF3	100	90.642	ENSDARG00000018904	cstf3	99	90.642	Danio_rerio
ENSSSCG00000040954	CSTF3	99	99.436	ENSDNOG00000007366	CSTF3	99	99.436	Dasypus_novemcinctus
ENSSSCG00000040954	CSTF3	99	91.457	ENSDORG00000005898	Cstf3	99	91.457	Dipodomys_ordii
ENSSSCG00000040954	CSTF3	98	57.025	FBgn0003559	su(f)	98	57.025	Drosophila_melanogaster
ENSSSCG00000040954	CSTF3	90	94.081	ENSETEG00000017097	CSTF3	90	94.081	Echinops_telfairi
ENSSSCG00000040954	CSTF3	84	73.884	ENSEBUG00000015459	cstf3	96	73.884	Eptatretus_burgeri
ENSSSCG00000040954	CSTF3	98	99.714	ENSEASG00005019884	CSTF3	100	99.714	Equus_asinus_asinus
ENSSSCG00000040954	CSTF3	98	99.714	ENSECAG00000023338	CSTF3	100	99.714	Equus_caballus
ENSSSCG00000040954	CSTF3	100	93.575	ENSEEUG00000015167	CSTF3	99	93.575	Erinaceus_europaeus
ENSSSCG00000040954	CSTF3	100	89.385	ENSELUG00000023393	cstf3	99	89.385	Esox_lucius
ENSSSCG00000040954	CSTF3	100	99.162	ENSFCAG00000030711	CSTF3	99	99.162	Felis_catus
ENSSSCG00000040954	CSTF3	93	98.498	ENSFALG00000010764	CSTF3	100	96.774	Ficedula_albicollis
ENSSSCG00000040954	CSTF3	100	99.162	ENSFDAG00000012082	CSTF3	99	99.162	Fukomys_damarensis
ENSSSCG00000040954	CSTF3	99	90.182	ENSFHEG00000020623	cstf3	99	90.182	Fundulus_heteroclitus
ENSSSCG00000040954	CSTF3	100	88.982	ENSGMOG00000012275	cstf3	99	88.982	Gadus_morhua
ENSSSCG00000040954	CSTF3	99	97.896	ENSGALG00000011685	CSTF3	99	97.896	Gallus_gallus
ENSSSCG00000040954	CSTF3	99	90.463	ENSGAFG00000002181	cstf3	99	90.463	Gambusia_affinis
ENSSSCG00000040954	CSTF3	99	90.999	ENSGACG00000015997	cstf3	99	90.999	Gasterosteus_aculeatus
ENSSSCG00000040954	CSTF3	100	96.927	ENSGAGG00000006200	CSTF3	99	96.927	Gopherus_agassizii
ENSSSCG00000040954	CSTF3	99	93.935	ENSGGOG00000026591	CSTF3	99	93.935	Gorilla_gorilla
ENSSSCG00000040954	CSTF3	98	91.631	ENSHBUG00000016656	cstf3	99	90.795	Haplochromis_burtoni
ENSSSCG00000040954	CSTF3	100	99.022	ENSHGLG00000017834	CSTF3	99	99.022	Heterocephalus_glaber_female
ENSSSCG00000040954	CSTF3	100	99.022	ENSHGLG00100018042	CSTF3	99	99.577	Heterocephalus_glaber_male
ENSSSCG00000040954	CSTF3	99	89.235	ENSHCOG00000015218	cstf3	99	88.424	Hippocampus_comes
ENSSSCG00000040954	CSTF3	100	89.804	ENSIPUG00000013170	CSTF3	99	90.678	Ictalurus_punctatus
ENSSSCG00000040954	CSTF3	100	99.302	ENSSTOG00000013306	CSTF3	99	99.302	Ictidomys_tridecemlineatus
ENSSSCG00000040954	CSTF3	99	87.448	ENSJJAG00000018430	Cstf3	99	87.448	Jaculus_jaculus
ENSSSCG00000040954	CSTF3	99	90.678	ENSKMAG00000010916	cstf3	99	90.678	Kryptolebias_marmoratus
ENSSSCG00000040954	CSTF3	100	89.665	ENSLBEG00000002306	cstf3	100	89.665	Labrus_bergylta
ENSSSCG00000040954	CSTF3	100	93.296	ENSLACG00000017296	CSTF3	99	93.706	Latimeria_chalumnae
ENSSSCG00000040954	CSTF3	100	92.598	ENSLOCG00000004415	cstf3	99	92.598	Lepisosteus_oculatus
ENSSSCG00000040954	CSTF3	100	99.022	ENSLAFG00000008712	CSTF3	99	99.022	Loxodonta_africana
ENSSSCG00000040954	CSTF3	100	99.302	ENSMFAG00000029516	CSTF3	100	99.840	Macaca_fascicularis
ENSSSCG00000040954	CSTF3	100	99.302	ENSMMUG00000002542	CSTF3	99	99.302	Macaca_mulatta
ENSSSCG00000040954	CSTF3	100	99.302	ENSMNEG00000021807	CSTF3	100	99.840	Macaca_nemestrina
ENSSSCG00000040954	CSTF3	100	99.302	ENSMLEG00000039594	CSTF3	100	99.840	Mandrillus_leucophaeus
ENSSSCG00000040954	CSTF3	99	91.268	ENSMAMG00000020423	cstf3	99	91.268	Mastacembelus_armatus
ENSSSCG00000040954	CSTF3	98	91.631	ENSMZEG00005012082	cstf3	99	90.795	Maylandia_zebra
ENSSSCG00000040954	CSTF3	100	97.629	ENSMGAG00000001383	CSTF3	99	97.890	Meleagris_gallopavo
ENSSSCG00000040954	CSTF3	100	98.743	ENSMAUG00000002487	Cstf3	99	98.743	Mesocricetus_auratus
ENSSSCG00000040954	CSTF3	100	99.022	ENSMICG00000004784	CSTF3	100	99.520	Microcebus_murinus
ENSSSCG00000040954	CSTF3	100	98.883	ENSMOCG00000017583	Cstf3	99	98.883	Microtus_ochrogaster
ENSSSCG00000040954	CSTF3	99	90.986	ENSMMOG00000016026	cstf3	95	90.986	Mola_mola
ENSSSCG00000040954	CSTF3	100	98.184	ENSMODG00000009745	-	99	98.184	Monodelphis_domestica
ENSSSCG00000040954	CSTF3	99	84.034	ENSMODG00000025205	-	99	84.034	Monodelphis_domestica
ENSSSCG00000040954	CSTF3	99	90.603	ENSMALG00000012050	cstf3	99	90.603	Monopterus_albus
ENSSSCG00000040954	CSTF3	100	98.883	MGP_CAROLIEiJ_G0024026	Cstf3	99	98.883	Mus_caroli
ENSSSCG00000040954	CSTF3	100	98.883	ENSMUSG00000027176	Cstf3	99	98.883	Mus_musculus
ENSSSCG00000040954	CSTF3	100	98.883	MGP_PahariEiJ_G0025464	Cstf3	99	98.883	Mus_pahari
ENSSSCG00000040954	CSTF3	100	98.883	MGP_SPRETEiJ_G0024939	Cstf3	99	98.883	Mus_spretus
ENSSSCG00000040954	CSTF3	100	99.162	ENSMPUG00000011457	CSTF3	99	99.162	Mustela_putorius_furo
ENSSSCG00000040954	CSTF3	99	99.437	ENSMLUG00000003073	-	99	99.437	Myotis_lucifugus
ENSSSCG00000040954	CSTF3	100	95.950	ENSMLUG00000026022	-	99	95.950	Myotis_lucifugus
ENSSSCG00000040954	CSTF3	100	98.883	ENSNGAG00000010677	Cstf3	99	98.883	Nannospalax_galili
ENSSSCG00000040954	CSTF3	87	90.880	ENSNBRG00000007345	cstf3	100	90.880	Neolamprologus_brichardi
ENSSSCG00000040954	CSTF3	100	99.302	ENSNLEG00000017901	CSTF3	100	99.840	Nomascus_leucogenys
ENSSSCG00000040954	CSTF3	73	95.029	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSSSCG00000040954	CSTF3	67	94.595	ENSOPRG00000000199	-	67	94.595	Ochotona_princeps
ENSSSCG00000040954	CSTF3	100	99.162	ENSODEG00000016737	-	99	99.162	Octodon_degus
ENSSSCG00000040954	CSTF3	89	86.950	ENSODEG00000006311	-	97	86.950	Octodon_degus
ENSSSCG00000040954	CSTF3	98	91.631	ENSONIG00000005563	cstf3	99	90.795	Oreochromis_niloticus
ENSSSCG00000040954	CSTF3	90	96.923	ENSOANG00000015140	CSTF3	100	96.923	Ornithorhynchus_anatinus
ENSSSCG00000040954	CSTF3	100	99.022	ENSOCUG00000015417	CSTF3	99	99.022	Oryctolagus_cuniculus
ENSSSCG00000040954	CSTF3	99	90.769	ENSORLG00000009762	cstf3	99	90.769	Oryzias_latipes
ENSSSCG00000040954	CSTF3	99	90.769	ENSORLG00020005540	cstf3	99	90.769	Oryzias_latipes_hni
ENSSSCG00000040954	CSTF3	99	90.629	ENSORLG00015003551	cstf3	99	90.629	Oryzias_latipes_hsok
ENSSSCG00000040954	CSTF3	100	89.804	ENSOMEG00000003848	cstf3	99	89.804	Oryzias_melastigma
ENSSSCG00000040954	CSTF3	100	98.748	ENSOGAG00000010229	CSTF3	99	98.748	Otolemur_garnettii
ENSSSCG00000040954	CSTF3	90	99.689	ENSOARG00000017271	CSTF3	99	99.689	Ovis_aries
ENSSSCG00000040954	CSTF3	99	96.192	ENSPPAG00000027358	CSTF3	99	96.192	Pan_paniscus
ENSSSCG00000040954	CSTF3	100	99.162	ENSPPRG00000016852	CSTF3	99	99.162	Panthera_pardus
ENSSSCG00000040954	CSTF3	100	99.162	ENSPTIG00000008716	CSTF3	99	99.162	Panthera_tigris_altaica
ENSSSCG00000040954	CSTF3	100	99.302	ENSPTRG00000003485	CSTF3	99	99.302	Pan_troglodytes
ENSSSCG00000040954	CSTF3	100	99.302	ENSPANG00000013722	CSTF3	99	99.302	Papio_anubis
ENSSSCG00000040954	CSTF3	100	92.318	ENSPKIG00000023648	cstf3	99	92.318	Paramormyrops_kingsleyae
ENSSSCG00000040954	CSTF3	99	96.774	ENSPSIG00000009173	CSTF3	99	96.774	Pelodiscus_sinensis
ENSSSCG00000040954	CSTF3	76	94.505	ENSPMGG00000000164	cstf3	99	94.505	Periophthalmus_magnuspinnatus
ENSSSCG00000040954	CSTF3	100	98.743	ENSPEMG00000011481	Cstf3	99	98.743	Peromyscus_maniculatus_bairdii
ENSSSCG00000040954	CSTF3	99	80.197	ENSPMAG00000007282	cstf3	99	79.888	Petromyzon_marinus
ENSSSCG00000040954	CSTF3	99	80.726	ENSPCIG00000030419	-	90	81.425	Phascolarctos_cinereus
ENSSSCG00000040954	CSTF3	99	95.915	ENSPCIG00000026406	-	100	98.080	Phascolarctos_cinereus
ENSSSCG00000040954	CSTF3	99	90.603	ENSPFOG00000017239	cstf3	99	90.603	Poecilia_formosa
ENSSSCG00000040954	CSTF3	99	90.603	ENSPLAG00000009456	cstf3	99	90.603	Poecilia_latipinna
ENSSSCG00000040954	CSTF3	99	90.603	ENSPMEG00000010320	cstf3	99	90.603	Poecilia_mexicana
ENSSSCG00000040954	CSTF3	99	90.603	ENSPREG00000013549	cstf3	99	90.603	Poecilia_reticulata
ENSSSCG00000040954	CSTF3	100	99.302	ENSPPYG00000003375	CSTF3	99	99.302	Pongo_abelii
ENSSSCG00000040954	CSTF3	71	100.000	ENSPCAG00000008025	-	71	100.000	Procavia_capensis
ENSSSCG00000040954	CSTF3	100	93.855	ENSPCOG00000014417	CSTF3	99	93.855	Propithecus_coquereli
ENSSSCG00000040954	CSTF3	100	93.855	ENSPVAG00000002350	CSTF3	99	93.855	Pteropus_vampyrus
ENSSSCG00000040954	CSTF3	98	91.631	ENSPNYG00000018259	cstf3	99	90.795	Pundamilia_nyererei
ENSSSCG00000040954	CSTF3	100	91.620	ENSPNAG00000020182	cstf3	99	91.620	Pygocentrus_nattereri
ENSSSCG00000040954	CSTF3	87	99.040	ENSRNOG00000012089	Cstf3	100	99.040	Rattus_norvegicus
ENSSSCG00000040954	CSTF3	99	98.449	ENSRBIG00000044258	CSTF3	100	99.840	Rhinopithecus_bieti
ENSSSCG00000040954	CSTF3	100	99.302	ENSRROG00000043450	CSTF3	100	99.840	Rhinopithecus_roxellana
ENSSSCG00000040954	CSTF3	100	99.302	ENSSBOG00000024764	CSTF3	100	99.840	Saimiri_boliviensis_boliviensis
ENSSSCG00000040954	CSTF3	100	84.916	ENSSHAG00000003135	-	99	84.916	Sarcophilus_harrisii
ENSSSCG00000040954	CSTF3	100	97.765	ENSSHAG00000018128	-	99	97.765	Sarcophilus_harrisii
ENSSSCG00000040954	CSTF3	100	91.899	ENSSFOG00015022133	cstf3	99	91.899	Scleropages_formosus
ENSSSCG00000040954	CSTF3	99	90.182	ENSSMAG00000002197	cstf3	96	93.600	Scophthalmus_maximus
ENSSSCG00000040954	CSTF3	99	91.024	ENSSDUG00000020426	cstf3	99	91.024	Seriola_dumerili
ENSSSCG00000040954	CSTF3	99	91.024	ENSSLDG00000025649	cstf3	100	90.188	Seriola_lalandi_dorsalis
ENSSSCG00000040954	CSTF3	100	98.883	ENSSARG00000000391	CSTF3	99	98.883	Sorex_araneus
ENSSSCG00000040954	CSTF3	97	96.961	ENSSPUG00000010546	CSTF3	100	96.961	Sphenodon_punctatus
ENSSSCG00000040954	CSTF3	99	91.024	ENSSPAG00000004958	cstf3	99	91.024	Stegastes_partitus
ENSSSCG00000040954	CSTF3	99	97.599	ENSTGUG00000005010	CSTF3	100	97.599	Taeniopygia_guttata
ENSSSCG00000040954	CSTF3	99	88.671	ENSTRUG00000004959	cstf3	99	89.930	Takifugu_rubripes
ENSSSCG00000040954	CSTF3	99	90.563	ENSTNIG00000013811	cstf3	99	90.563	Tetraodon_nigroviridis
ENSSSCG00000040954	CSTF3	90	96.262	ENSTBEG00000001544	CSTF3	90	96.262	Tupaia_belangeri
ENSSSCG00000040954	CSTF3	100	96.229	ENSTTRG00000016366	CSTF3	99	96.229	Tursiops_truncatus
ENSSSCG00000040954	CSTF3	99	99.298	ENSUMAG00000018971	CSTF3	100	99.520	Ursus_maritimus
ENSSSCG00000040954	CSTF3	100	99.162	ENSVPAG00000007800	CSTF3	99	99.162	Vicugna_pacos
ENSSSCG00000040954	CSTF3	99	99.859	ENSVVUG00000014938	CSTF3	100	99.840	Vulpes_vulpes
ENSSSCG00000040954	CSTF3	88	79.219	ENSXETG00000021399	cstf3	100	80.421	Xenopus_tropicalis
ENSSSCG00000040954	CSTF3	67	43.621	ENSXETG00000017946	-	100	43.621	Xenopus_tropicalis
ENSSSCG00000040954	CSTF3	87	90.240	ENSXCOG00000011741	cstf3	100	90.240	Xiphophorus_couchianus
ENSSSCG00000040954	CSTF3	99	90.603	ENSXMAG00000009545	cstf3	99	90.603	Xiphophorus_maculatus