EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000000023 (Gene tree)
Gene ID: 101978485
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 76663 bases
Position: chrJH393313.1:373934-450596
Accession: 101978485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000000022	RTC	PF01137.21	5.2e-61	1	1
ENSSTOP00000000022	RTC_insert	PF05189.13	4.2e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000000023	RCL1-201	2795	XM_005324060	ENSSTOP00000000022	373 (aa)	XP_005324117	I3LVU8

Gene Model

Click here to download ENSSTOG00000000023's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000000023's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000000023	RCL1	100	97.587	ENSG00000120158	RCL1	100	97.587	Homo_sapiens
ENSSTOG00000000023	RCL1	100	78.342	ENSAPOG00000015666	rcl1	100	78.342	Acanthochromis_polyacanthus
ENSSTOG00000000023	RCL1	100	95.979	ENSAMEG00000002631	RCL1	100	95.979	Ailuropoda_melanoleuca
ENSSTOG00000000023	RCL1	99	77.838	ENSACIG00000021195	rcl1	99	77.838	Amphilophus_citrinellus
ENSSTOG00000000023	RCL1	100	77.273	ENSAOCG00000002223	rcl1	100	77.273	Amphiprion_ocellaris
ENSSTOG00000000023	RCL1	100	77.540	ENSAPEG00000006905	rcl1	100	77.540	Amphiprion_percula
ENSSTOG00000000023	RCL1	99	76.216	ENSATEG00000020026	rcl1	99	76.216	Anabas_testudineus
ENSSTOG00000000023	RCL1	88	87.195	ENSAPLG00000006031	RCL1	100	87.195	Anas_platyrhynchos
ENSSTOG00000000023	RCL1	100	86.059	ENSACAG00000003640	RCL1	100	86.059	Anolis_carolinensis
ENSSTOG00000000023	RCL1	100	97.051	ENSANAG00000037372	RCL1	100	97.051	Aotus_nancymaae
ENSSTOG00000000023	RCL1	99	78.378	ENSACLG00000021724	rcl1	99	78.378	Astatotilapia_calliptera
ENSSTOG00000000023	RCL1	98	78.533	ENSAMXG00000033394	rcl1	99	78.533	Astyanax_mexicanus
ENSSTOG00000000023	RCL1	99	46.809	WBGene00022852	ZK1127.5	99	46.809	Caenorhabditis_elegans
ENSSTOG00000000023	RCL1	100	97.319	ENSCJAG00000011202	RCL1	100	97.319	Callithrix_jacchus
ENSSTOG00000000023	RCL1	100	94.906	ENSCAFG00000002091	RCL1	100	94.906	Canis_familiaris
ENSSTOG00000000023	RCL1	100	94.906	ENSCAFG00020000638	RCL1	78	94.906	Canis_lupus_dingo
ENSSTOG00000000023	RCL1	100	95.710	ENSCHIG00000012407	RCL1	100	95.710	Capra_hircus
ENSSTOG00000000023	RCL1	88	96.942	ENSTSYG00000009592	RCL1	97	97.238	Carlito_syrichta
ENSSTOG00000000023	RCL1	67	81.065	ENSCAPG00000013575	RCL1	100	81.065	Cavia_aperea
ENSSTOG00000000023	RCL1	100	96.783	ENSCPOG00000015354	RCL1	100	96.783	Cavia_porcellus
ENSSTOG00000000023	RCL1	100	97.319	ENSCCAG00000033505	RCL1	100	97.319	Cebus_capucinus
ENSSTOG00000000023	RCL1	100	96.783	ENSCATG00000034721	RCL1	100	96.783	Cercocebus_atys
ENSSTOG00000000023	RCL1	100	96.515	ENSCLAG00000007445	RCL1	100	96.515	Chinchilla_lanigera
ENSSTOG00000000023	RCL1	100	97.051	ENSCSAG00000008811	RCL1	100	97.051	Chlorocebus_sabaeus
ENSSTOG00000000023	RCL1	87	80.805	ENSCHOG00000007216	RCL1	100	80.805	Choloepus_hoffmanni
ENSSTOG00000000023	RCL1	100	89.008	ENSCPBG00000025481	RCL1	94	89.058	Chrysemys_picta_bellii
ENSSTOG00000000023	RCL1	98	59.730	ENSCING00000019565	-	98	59.730	Ciona_intestinalis
ENSSTOG00000000023	RCL1	100	97.319	ENSCANG00000027099	RCL1	100	97.319	Colobus_angolensis_palliatus
ENSSTOG00000000023	RCL1	100	94.906	ENSCGRG00001013748	Rcl1	100	94.906	Cricetulus_griseus_chok1gshd
ENSSTOG00000000023	RCL1	88	94.817	ENSCGRG00000005843	Rcl1	99	94.817	Cricetulus_griseus_crigri
ENSSTOG00000000023	RCL1	99	78.919	ENSCSEG00000000712	rcl1	97	78.919	Cynoglossus_semilaevis
ENSSTOG00000000023	RCL1	99	79.459	ENSCVAG00000011536	rcl1	99	79.459	Cyprinodon_variegatus
ENSSTOG00000000023	RCL1	98	76.022	ENSDARG00000038312	rcl1	100	76.022	Danio_rerio
ENSSTOG00000000023	RCL1	71	96.604	ENSDNOG00000019911	RCL1	100	96.604	Dasypus_novemcinctus
ENSSTOG00000000023	RCL1	100	95.979	ENSDORG00000015645	Rcl1	100	95.979	Dipodomys_ordii
ENSSTOG00000000023	RCL1	99	54.762	FBgn0020909	Rtc1	98	54.762	Drosophila_melanogaster
ENSSTOG00000000023	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSSTOG00000000023	RCL1	100	53.600	ENSEBUG00000016621	-	100	53.600	Eptatretus_burgeri
ENSSTOG00000000023	RCL1	100	96.247	ENSEASG00005010653	RCL1	100	96.247	Equus_asinus_asinus
ENSSTOG00000000023	RCL1	100	96.247	ENSECAG00000015973	RCL1	100	96.247	Equus_caballus
ENSSTOG00000000023	RCL1	100	80.429	ENSEEUG00000009801	RCL1	100	80.429	Erinaceus_europaeus
ENSSTOG00000000023	RCL1	100	75.668	ENSELUG00000007353	rcl1	100	75.668	Esox_lucius
ENSSTOG00000000023	RCL1	100	94.370	ENSFCAG00000014557	RCL1	100	94.370	Felis_catus
ENSSTOG00000000023	RCL1	95	82.535	ENSFALG00000010553	RCL1	94	82.535	Ficedula_albicollis
ENSSTOG00000000023	RCL1	88	95.719	ENSFDAG00000004209	RCL1	100	95.719	Fukomys_damarensis
ENSSTOG00000000023	RCL1	99	79.189	ENSFHEG00000011228	rcl1	99	79.189	Fundulus_heteroclitus
ENSSTOG00000000023	RCL1	99	77.838	ENSGMOG00000004677	rcl1	99	78.108	Gadus_morhua
ENSSTOG00000000023	RCL1	99	85.366	ENSGALG00000015024	RCL1	99	85.366	Gallus_gallus
ENSSTOG00000000023	RCL1	99	77.838	ENSGAFG00000007257	rcl1	99	77.838	Gambusia_affinis
ENSSTOG00000000023	RCL1	100	77.273	ENSGACG00000017474	rcl1	100	77.273	Gasterosteus_aculeatus
ENSSTOG00000000023	RCL1	100	88.740	ENSGAGG00000003689	RCL1	100	88.740	Gopherus_agassizii
ENSSTOG00000000023	RCL1	100	97.051	ENSGGOG00000015041	RCL1	100	97.051	Gorilla_gorilla
ENSSTOG00000000023	RCL1	99	78.649	ENSHBUG00000001393	rcl1	99	78.649	Haplochromis_burtoni
ENSSTOG00000000023	RCL1	100	95.979	ENSHGLG00000016452	RCL1	100	95.979	Heterocephalus_glaber_female
ENSSTOG00000000023	RCL1	100	80.965	ENSHGLG00000005368	-	100	80.429	Heterocephalus_glaber_female
ENSSTOG00000000023	RCL1	100	82.038	ENSHGLG00100018010	-	100	81.501	Heterocephalus_glaber_male
ENSSTOG00000000023	RCL1	100	89.008	ENSHGLG00100008718	-	100	89.008	Heterocephalus_glaber_male
ENSSTOG00000000023	RCL1	99	77.838	ENSHCOG00000020170	rcl1	99	77.838	Hippocampus_comes
ENSSTOG00000000023	RCL1	98	79.620	ENSIPUG00000018054	RCL1	99	79.620	Ictalurus_punctatus
ENSSTOG00000000023	RCL1	54	71.144	ENSJJAG00000000764	-	95	71.134	Jaculus_jaculus
ENSSTOG00000000023	RCL1	100	83.914	ENSJJAG00000015632	-	100	83.914	Jaculus_jaculus
ENSSTOG00000000023	RCL1	100	94.906	ENSJJAG00000022803	-	100	94.906	Jaculus_jaculus
ENSSTOG00000000023	RCL1	98	77.112	ENSKMAG00000011946	rcl1	99	77.112	Kryptolebias_marmoratus
ENSSTOG00000000023	RCL1	99	75.135	ENSLBEG00000003957	rcl1	99	75.135	Labrus_bergylta
ENSSTOG00000000023	RCL1	91	81.711	ENSLACG00000004594	RCL1	98	85.804	Latimeria_chalumnae
ENSSTOG00000000023	RCL1	100	81.501	ENSLOCG00000010148	rcl1	98	81.501	Lepisosteus_oculatus
ENSSTOG00000000023	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSSTOG00000000023	RCL1	100	97.051	ENSMFAG00000037906	RCL1	100	97.051	Macaca_fascicularis
ENSSTOG00000000023	RCL1	100	97.051	ENSMNEG00000012288	RCL1	100	97.051	Macaca_nemestrina
ENSSTOG00000000023	RCL1	100	97.051	ENSMLEG00000043088	RCL1	100	97.051	Mandrillus_leucophaeus
ENSSTOG00000000023	RCL1	99	78.649	ENSMAMG00000008311	rcl1	99	78.649	Mastacembelus_armatus
ENSSTOG00000000023	RCL1	99	78.378	ENSMZEG00005017292	rcl1	99	78.378	Maylandia_zebra
ENSSTOG00000000023	RCL1	58	83.105	ENSMGAG00000002245	RCL1	97	83.019	Meleagris_gallopavo
ENSSTOG00000000023	RCL1	58	94.884	ENSMAUG00000008922	Rcl1	97	94.712	Mesocricetus_auratus
ENSSTOG00000000023	RCL1	100	95.442	ENSMICG00000015562	RCL1	100	95.442	Microcebus_murinus
ENSSTOG00000000023	RCL1	100	95.979	ENSMOCG00000012145	Rcl1	100	95.979	Microtus_ochrogaster
ENSSTOG00000000023	RCL1	99	74.663	ENSMMOG00000021264	rcl1	99	74.663	Mola_mola
ENSSTOG00000000023	RCL1	95	92.676	ENSMODG00000015377	RCL1	94	92.676	Monodelphis_domestica
ENSSTOG00000000023	RCL1	99	77.568	ENSMALG00000018618	rcl1	99	77.568	Monopterus_albus
ENSSTOG00000000023	RCL1	100	95.710	MGP_CAROLIEiJ_G0022853	Rcl1	100	95.710	Mus_caroli
ENSSTOG00000000023	RCL1	100	95.710	ENSMUSG00000024785	Rcl1	100	95.710	Mus_musculus
ENSSTOG00000000023	RCL1	100	95.174	MGP_PahariEiJ_G0014346	Rcl1	100	96.471	Mus_pahari
ENSSTOG00000000023	RCL1	100	94.906	MGP_SPRETEiJ_G0023771	Rcl1	100	95.882	Mus_spretus
ENSSTOG00000000023	RCL1	100	94.906	ENSMPUG00000004998	RCL1	100	94.906	Mustela_putorius_furo
ENSSTOG00000000023	RCL1	100	95.710	ENSMLUG00000009654	RCL1	100	95.710	Myotis_lucifugus
ENSSTOG00000000023	RCL1	100	96.247	ENSNGAG00000015327	Rcl1	100	96.247	Nannospalax_galili
ENSSTOG00000000023	RCL1	90	77.448	ENSNBRG00000019854	rcl1	96	74.022	Neolamprologus_brichardi
ENSSTOG00000000023	RCL1	100	94.370	ENSNLEG00000008891	RCL1	100	94.370	Nomascus_leucogenys
ENSSTOG00000000023	RCL1	100	85.791	ENSMEUG00000007653	RCL1	100	85.791	Notamacropus_eugenii
ENSSTOG00000000023	RCL1	100	97.319	ENSOPRG00000010965	RCL1	100	97.319	Ochotona_princeps
ENSSTOG00000000023	RCL1	88	79.268	ENSODEG00000004151	RCL1	96	80.183	Octodon_degus
ENSSTOG00000000023	RCL1	99	78.378	ENSONIG00000003871	rcl1	99	78.378	Oreochromis_niloticus
ENSSTOG00000000023	RCL1	67	87.352	ENSOANG00000013193	-	100	87.352	Ornithorhynchus_anatinus
ENSSTOG00000000023	RCL1	100	97.319	ENSOCUG00000008161	RCL1	100	97.319	Oryctolagus_cuniculus
ENSSTOG00000000023	RCL1	100	75.936	ENSORLG00000010443	rcl1	100	75.936	Oryzias_latipes
ENSSTOG00000000023	RCL1	100	75.936	ENSORLG00020012211	rcl1	100	75.936	Oryzias_latipes_hni
ENSSTOG00000000023	RCL1	100	75.668	ENSORLG00015001122	rcl1	100	75.668	Oryzias_latipes_hsok
ENSSTOG00000000023	RCL1	100	77.540	ENSOMEG00000022976	rcl1	88	77.540	Oryzias_melastigma
ENSSTOG00000000023	RCL1	100	94.370	ENSOGAG00000007480	RCL1	100	94.370	Otolemur_garnettii
ENSSTOG00000000023	RCL1	100	95.979	ENSOARG00000013463	RCL1	100	95.979	Ovis_aries
ENSSTOG00000000023	RCL1	100	97.319	ENSPPAG00000037958	RCL1	100	97.319	Pan_paniscus
ENSSTOG00000000023	RCL1	100	93.834	ENSPPRG00000022645	RCL1	100	93.834	Panthera_pardus
ENSSTOG00000000023	RCL1	87	94.172	ENSPTIG00000019031	RCL1	97	93.269	Panthera_tigris_altaica
ENSSTOG00000000023	RCL1	100	97.051	ENSPTRG00000020743	RCL1	100	97.051	Pan_troglodytes
ENSSTOG00000000023	RCL1	100	97.051	ENSPANG00000025151	RCL1	100	97.051	Papio_anubis
ENSSTOG00000000023	RCL1	100	77.540	ENSPKIG00000021022	rcl1	100	77.540	Paramormyrops_kingsleyae
ENSSTOG00000000023	RCL1	88	89.329	ENSPSIG00000012302	RCL1	100	89.329	Pelodiscus_sinensis
ENSSTOG00000000023	RCL1	100	75.936	ENSPMGG00000024007	rcl1	100	75.936	Periophthalmus_magnuspinnatus
ENSSTOG00000000023	RCL1	100	95.979	ENSPEMG00000023275	Rcl1	100	95.979	Peromyscus_maniculatus_bairdii
ENSSTOG00000000023	RCL1	100	92.761	ENSPCIG00000000188	RCL1	100	92.761	Phascolarctos_cinereus
ENSSTOG00000000023	RCL1	99	78.108	ENSPFOG00000019682	rcl1	99	78.108	Poecilia_formosa
ENSSTOG00000000023	RCL1	99	78.108	ENSPLAG00000022354	rcl1	99	78.108	Poecilia_latipinna
ENSSTOG00000000023	RCL1	99	78.108	ENSPMEG00000008131	rcl1	99	78.108	Poecilia_mexicana
ENSSTOG00000000023	RCL1	99	77.838	ENSPREG00000008032	rcl1	99	77.838	Poecilia_reticulata
ENSSTOG00000000023	RCL1	100	97.319	ENSPPYG00000019244	RCL1	100	97.319	Pongo_abelii
ENSSTOG00000000023	RCL1	100	86.059	ENSPCAG00000001440	RCL1	100	86.059	Procavia_capensis
ENSSTOG00000000023	RCL1	100	97.051	ENSPCOG00000009611	RCL1	100	97.051	Propithecus_coquereli
ENSSTOG00000000023	RCL1	100	95.710	ENSPVAG00000015752	RCL1	100	95.710	Pteropus_vampyrus
ENSSTOG00000000023	RCL1	99	78.378	ENSPNYG00000012910	rcl1	99	78.378	Pundamilia_nyererei
ENSSTOG00000000023	RCL1	99	78.820	ENSPNAG00000028307	rcl1	92	78.820	Pygocentrus_nattereri
ENSSTOG00000000023	RCL1	100	95.979	ENSRNOG00000015491	Rcl1	100	95.979	Rattus_norvegicus
ENSSTOG00000000023	RCL1	100	97.051	ENSRBIG00000035818	RCL1	100	97.051	Rhinopithecus_bieti
ENSSTOG00000000023	RCL1	100	97.051	ENSRROG00000029781	RCL1	100	97.051	Rhinopithecus_roxellana
ENSSTOG00000000023	RCL1	98	36.757	YOL010W	-	97	36.757	Saccharomyces_cerevisiae
ENSSTOG00000000023	RCL1	100	97.051	ENSSBOG00000026369	RCL1	100	97.051	Saimiri_boliviensis_boliviensis
ENSSTOG00000000023	RCL1	88	91.515	ENSSHAG00000014086	RCL1	100	91.515	Sarcophilus_harrisii
ENSSTOG00000000023	RCL1	100	77.807	ENSSFOG00015023020	rcl1	100	77.807	Scleropages_formosus
ENSSTOG00000000023	RCL1	99	78.108	ENSSMAG00000019751	rcl1	85	78.108	Scophthalmus_maximus
ENSSTOG00000000023	RCL1	100	77.273	ENSSDUG00000006349	rcl1	100	77.273	Seriola_dumerili
ENSSTOG00000000023	RCL1	100	77.540	ENSSLDG00000022076	rcl1	100	77.540	Seriola_lalandi_dorsalis
ENSSTOG00000000023	RCL1	100	94.906	ENSSARG00000009260	RCL1	100	94.906	Sorex_araneus
ENSSTOG00000000023	RCL1	100	87.668	ENSSPUG00000016330	RCL1	100	87.668	Sphenodon_punctatus
ENSSTOG00000000023	RCL1	100	79.144	ENSSPAG00000018038	rcl1	100	79.144	Stegastes_partitus
ENSSTOG00000000023	RCL1	100	96.515	ENSSSCG00000005217	RCL1	83	96.515	Sus_scrofa
ENSSTOG00000000023	RCL1	100	84.800	ENSTGUG00000005138	RCL1	100	84.800	Taeniopygia_guttata
ENSSTOG00000000023	RCL1	99	78.108	ENSTRUG00000010493	rcl1	99	78.108	Takifugu_rubripes
ENSSTOG00000000023	RCL1	99	76.757	ENSTNIG00000013214	rcl1	99	76.757	Tetraodon_nigroviridis
ENSSTOG00000000023	RCL1	100	89.008	ENSTBEG00000016339	RCL1	100	89.008	Tupaia_belangeri
ENSSTOG00000000023	RCL1	100	95.174	ENSTTRG00000016525	RCL1	100	95.174	Tursiops_truncatus
ENSSTOG00000000023	RCL1	100	95.979	ENSUAMG00000005598	RCL1	100	95.979	Ursus_americanus
ENSSTOG00000000023	RCL1	88	95.107	ENSUMAG00000017890	RCL1	97	95.107	Ursus_maritimus
ENSSTOG00000000023	RCL1	88	96.636	ENSVPAG00000009188	RCL1	100	96.636	Vicugna_pacos
ENSSTOG00000000023	RCL1	88	95.122	ENSVVUG00000007304	RCL1	89	95.122	Vulpes_vulpes
ENSSTOG00000000023	RCL1	100	74.866	ENSXETG00000000592	rcl1	100	74.866	Xenopus_tropicalis
ENSSTOG00000000023	RCL1	99	78.108	ENSXCOG00000004922	rcl1	99	78.108	Xiphophorus_couchianus
ENSSTOG00000000023	RCL1	59	30.000	ENSXCOG00000008002	rtca	63	30.000	Xiphophorus_couchianus
ENSSTOG00000000023	RCL1	99	78.108	ENSXMAG00000022366	RCL1	99	78.108	Xiphophorus_maculatus