EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000000084 (Gene tree)
Gene ID: 101969533
Gene Symbol: -
Alias: MGC45806
Full Name: RAB42%2C member RAS oncogene family
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 2372 bases
Position: chrJH393284.1:12685711-12688082
Accession: 101969533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000000071	MMR_HSR1	PF01926.23	3.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000000083	-	1490	XM_005317693	ENSSTOP00000000071	217 (aa)	XP_005317750	I3LVY1

Gene Model

Click here to download ENSSTOG00000000084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000000084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000000084	-	80	36.416	ENSSTOG00000010962	RAB23	70	36.416
ENSSTOG00000000084	-	76	40.606	ENSSTOG00000000634	RAB25	75	40.606
ENSSTOG00000000084	-	92	34.826	ENSSTOG00000026229	RAB5A	91	34.826
ENSSTOG00000000084	-	57	30.645	ENSSTOG00000014453	ARL3	63	30.645
ENSSTOG00000000084	-	96	34.928	ENSSTOG00000023497	RAB6A	94	34.928
ENSSTOG00000000084	-	87	39.896	ENSSTOG00000001886	RAB2B	86	41.808
ENSSTOG00000000084	-	96	36.493	ENSSTOG00000015255	RAB11A	95	36.493
ENSSTOG00000000084	-	93	36.098	ENSSTOG00000011222	-	93	36.098
ENSSTOG00000000084	-	64	33.813	ENSSTOG00000021206	HRAS	86	31.176
ENSSTOG00000000084	-	96	35.514	ENSSTOG00000025248	RAB14	93	35.514
ENSSTOG00000000084	-	76	30.899	ENSSTOG00000027610	RASL11B	67	30.899
ENSSTOG00000000084	-	81	43.258	ENSSTOG00000011052	RAB1B	85	43.258
ENSSTOG00000000084	-	79	30.286	ENSSTOG00000008444	RAB36	64	30.286
ENSSTOG00000000084	-	74	38.788	ENSSTOG00000004081	RAB9B	79	38.788
ENSSTOG00000000084	-	73	35.220	ENSSTOG00000004544	RHEB	83	35.220
ENSSTOG00000000084	-	97	36.150	ENSSTOG00000031571	RAB11B	94	36.150
ENSSTOG00000000084	-	64	35.971	ENSSTOG00000023151	NRAS	86	32.941
ENSSTOG00000000084	-	87	37.566	ENSSTOG00000014560	-	88	37.566
ENSSTOG00000000084	-	81	42.697	ENSSTOG00000020693	-	84	42.697
ENSSTOG00000000084	-	87	47.340	ENSSTOG00000011237	RAB39B	86	47.340
ENSSTOG00000000084	-	64	31.655	ENSSTOG00000025062	RAB34	52	31.655
ENSSTOG00000000084	-	72	34.395	ENSSTOG00000009530	KRAS	96	31.383
ENSSTOG00000000084	-	81	42.697	ENSSTOG00000020966	RAB30	84	42.697
ENSSTOG00000000084	-	78	38.235	ENSSTOG00000000861	RAB15	77	38.235
ENSSTOG00000000084	-	70	43.137	ENSSTOG00000027511	RAB33B	65	43.137
ENSSTOG00000000084	-	74	36.025	ENSSTOG00000010536	RAB5B	72	36.025
ENSSTOG00000000084	-	91	34.328	ENSSTOG00000024550	RAB9A	96	34.328
ENSSTOG00000000084	-	70	34.177	ENSSTOG00000023505	RERG	72	34.177
ENSSTOG00000000084	-	80	31.250	ENSSTOG00000028487	RAB7A	81	31.250
ENSSTOG00000000084	-	70	38.562	ENSSTOG00000008386	RAB33A	62	38.562
ENSSTOG00000000084	-	80	36.571	ENSSTOG00000025122	RAB12	74	36.207
ENSSTOG00000000084	-	74	37.888	ENSSTOG00000006620	RAB5C	72	37.888
ENSSTOG00000000084	-	83	36.508	ENSSTOG00000014123	RAB6B	88	36.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000000084	-	100	85.253	ENSANAG00000035487	-	100	85.253	Aotus_nancymaae
ENSSTOG00000000084	-	100	79.545	ENSBTAG00000021525	-	100	79.545	Bos_taurus
ENSSTOG00000000084	-	98	60.000	ENSCPBG00000011245	RAB42	99	60.952	Chrysemys_picta_bellii
ENSSTOG00000000084	-	100	78.440	ENSCGRG00001019426	Rab42	100	78.440	Cricetulus_griseus_chok1gshd
ENSSTOG00000000084	-	100	80.184	ENSDORG00000023607	Rab42	100	80.184	Dipodomys_ordii
ENSSTOG00000000084	-	100	83.486	ENSFCAG00000037124	-	100	83.486	Felis_catus
ENSSTOG00000000084	-	98	60.094	ENSGAGG00000004921	RAB42	99	59.809	Gopherus_agassizii
ENSSTOG00000000084	-	100	79.358	ENSMAUG00000020223	Rab42	100	79.358	Mesocricetus_auratus
ENSSTOG00000000084	-	100	82.110	ENSMICG00000029915	-	100	84.862	Microcebus_murinus
ENSSTOG00000000084	-	100	80.184	ENSMOCG00000021639	Rab42	100	80.184	Microtus_ochrogaster
ENSSTOG00000000084	-	97	66.351	ENSMODG00000023873	-	95	66.351	Monodelphis_domestica
ENSSTOG00000000084	-	100	82.110	ENSNGAG00000015676	Rab42	100	82.110	Nannospalax_galili
ENSSTOG00000000084	-	100	84.404	ENSOGAG00000006951	-	100	84.404	Otolemur_garnettii
ENSSTOG00000000084	-	97	60.377	ENSPSIG00000006831	RAB42	92	60.377	Pelodiscus_sinensis
ENSSTOG00000000084	-	100	81.651	ENSPCOG00000008605	-	100	84.404	Propithecus_coquereli
ENSSTOG00000000084	-	96	78.469	ENSSARG00000007565	-	100	78.469	Sorex_araneus
ENSSTOG00000000084	-	98	59.722	ENSSPUG00000010337	RAB42	98	59.722	Sphenodon_punctatus
ENSSTOG00000000084	-	100	82.727	ENSSSCG00000030432	-	100	82.727	Sus_scrofa