EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000000322 (Gene tree)
Gene ID: 101959525
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 538197 bases
Position: chrJH393340.1:6306877-6845073
Accession: 101959525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000031566	Fox-1_C	PF12414.8	9.8e-43	1	1
ENSSTOP00000027848	Fox-1_C	PF12414.8	9.9e-43	1	1
ENSSTOP00000000288	Fox-1_C	PF12414.8	1.1e-40	1	1
ENSSTOP00000031410	Fox-1_C	PF12414.8	1.6e-40	1	1
ENSSTOP00000031410	RRM_1	PF00076.22	2.6e-18	1	1
ENSSTOP00000000288	RRM_1	PF00076.22	2.8e-18	1	1
ENSSTOP00000027848	RRM_1	PF00076.22	2.9e-18	1	1
ENSSTOP00000031566	RRM_1	PF00076.22	2.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000035961	RBFOX1-203	4222	-	ENSSTOP00000031410	376 (aa)	-	A0A287DCV9
ENSSTOT00000034766	RBFOX1-204	1185	-	ENSSTOP00000031566	394 (aa)	-	A0A287DDI7
ENSSTOT00000032251	RBFOX1-201	1194	XM_005327154	ENSSTOP00000027848	397 (aa)	XP_005327211	A0A287D2R9
ENSSTOT00000000323	RBFOX1-202	1257	XM_005327153	ENSSTOP00000000288	418 (aa)	XP_005327210	I3LWE2

Gene Model

Click here to download ENSSTOG00000000322's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000000322's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000000322	RBFOX1	100	60.533	ENSSTOG00000014841	RBFOX2	100	60.048
ENSSTOG00000000322	RBFOX1	92	56.403	ENSSTOG00000026817	RBFOX3	100	59.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000000322	RBFOX1	100	97.985	ENSG00000078328	RBFOX1	100	97.985	Homo_sapiens
ENSSTOG00000000322	RBFOX1	100	76.145	ENSAPOG00000003197	rbfox1	100	76.627	Acanthochromis_polyacanthus
ENSSTOG00000000322	RBFOX1	59	95.045	ENSAMEG00000008605	RBFOX1	100	93.600	Ailuropoda_melanoleuca
ENSSTOG00000000322	RBFOX1	68	64.865	ENSACIG00000005478	rbfox1	68	64.865	Amphilophus_citrinellus
ENSSTOG00000000322	RBFOX1	80	70.347	ENSAOCG00000008283	rbfox1	99	70.032	Amphiprion_ocellaris
ENSSTOG00000000322	RBFOX1	96	71.693	ENSAPEG00000010636	rbfox1	100	71.579	Amphiprion_percula
ENSSTOG00000000322	RBFOX1	80	68.966	ENSATEG00000007513	rbfox1	99	68.652	Anabas_testudineus
ENSSTOG00000000322	RBFOX1	98	93.830	ENSAPLG00000013263	RBFOX1	97	93.830	Anas_platyrhynchos
ENSSTOG00000000322	RBFOX1	99	86.735	ENSACAG00000004013	RBFOX1	100	86.216	Anolis_carolinensis
ENSSTOG00000000322	RBFOX1	99	96.277	ENSANAG00000029527	RBFOX1	98	97.949	Aotus_nancymaae
ENSSTOG00000000322	RBFOX1	60	86.667	ENSAMXG00000002431	rbfox1	71	81.377	Astyanax_mexicanus
ENSSTOG00000000322	RBFOX1	100	97.340	ENSBTAG00000007210	RBFOX1	100	97.340	Bos_taurus
ENSSTOG00000000322	RBFOX1	100	96.890	ENSCJAG00000017351	RBFOX1	100	96.890	Callithrix_jacchus
ENSSTOG00000000322	RBFOX1	100	97.129	ENSCAFG00000019082	RBFOX1	100	97.129	Canis_familiaris
ENSSTOG00000000322	RBFOX1	97	82.787	ENSCAFG00020024881	RBFOX1	83	96.284	Canis_lupus_dingo
ENSSTOG00000000322	RBFOX1	100	97.340	ENSCHIG00000023549	RBFOX1	100	97.340	Capra_hircus
ENSSTOG00000000322	RBFOX1	97	97.808	ENSTSYG00000005334	RBFOX1	100	97.686	Carlito_syrichta
ENSSTOG00000000322	RBFOX1	100	96.651	ENSCAPG00000017669	RBFOX1	100	97.680	Cavia_aperea
ENSSTOG00000000322	RBFOX1	100	97.733	ENSCPOG00000011314	RBFOX1	100	97.733	Cavia_porcellus
ENSSTOG00000000322	RBFOX1	100	96.890	ENSCCAG00000023031	RBFOX1	100	96.890	Cebus_capucinus
ENSSTOG00000000322	RBFOX1	100	96.890	ENSCATG00000033816	RBFOX1	100	96.890	Cercocebus_atys
ENSSTOG00000000322	RBFOX1	100	97.481	ENSCLAG00000012761	RBFOX1	100	97.481	Chinchilla_lanigera
ENSSTOG00000000322	RBFOX1	100	97.340	ENSCSAG00000008739	RBFOX1	100	97.340	Chlorocebus_sabaeus
ENSSTOG00000000322	RBFOX1	100	75.359	ENSCHOG00000012843	RBFOX1	100	75.359	Choloepus_hoffmanni
ENSSTOG00000000322	RBFOX1	100	92.819	ENSCPBG00000026626	RBFOX1	100	92.819	Chrysemys_picta_bellii
ENSSTOG00000000322	RBFOX1	100	96.890	ENSCANG00000033125	RBFOX1	100	96.890	Colobus_angolensis_palliatus
ENSSTOG00000000322	RBFOX1	100	96.977	ENSCGRG00001013729	Rbfox1	100	96.977	Cricetulus_griseus_chok1gshd
ENSSTOG00000000322	RBFOX1	100	96.977	ENSCGRG00000003272	Rbfox1	100	96.977	Cricetulus_griseus_crigri
ENSSTOG00000000322	RBFOX1	96	71.285	ENSCSEG00000008840	rbfox1	100	71.285	Cynoglossus_semilaevis
ENSSTOG00000000322	RBFOX1	100	80.653	ENSDARG00000014746	rbfox1	100	86.341	Danio_rerio
ENSSTOG00000000322	RBFOX1	98	97.692	ENSDNOG00000043612	RBFOX1	94	97.692	Dasypus_novemcinctus
ENSSTOG00000000322	RBFOX1	100	92.695	ENSDORG00000010024	Rbfox1	100	92.574	Dipodomys_ordii
ENSSTOG00000000322	RBFOX1	100	77.990	ENSETEG00000003771	RBFOX1	100	77.990	Echinops_telfairi
ENSSTOG00000000322	RBFOX1	98	98.458	ENSEASG00005011599	RBFOX1	98	98.718	Equus_asinus_asinus
ENSSTOG00000000322	RBFOX1	100	97.606	ENSECAG00000012667	RBFOX1	100	97.606	Equus_caballus
ENSSTOG00000000322	RBFOX1	84	66.390	ENSELUG00000013096	rbfox1	98	69.318	Esox_lucius
ENSSTOG00000000322	RBFOX1	100	97.340	ENSFCAG00000025322	RBFOX1	100	97.340	Felis_catus
ENSSTOG00000000322	RBFOX1	86	93.808	ENSFALG00000004027	RBFOX1	100	91.592	Ficedula_albicollis
ENSSTOG00000000322	RBFOX1	100	98.237	ENSFDAG00000007388	RBFOX1	100	98.237	Fukomys_damarensis
ENSSTOG00000000322	RBFOX1	100	92.344	ENSGALG00000034325	RBFOX1	100	92.344	Gallus_gallus
ENSSTOG00000000322	RBFOX1	100	91.627	ENSGAGG00000023681	RBFOX1	100	94.164	Gopherus_agassizii
ENSSTOG00000000322	RBFOX1	100	96.890	ENSGGOG00000016871	-	100	96.890	Gorilla_gorilla
ENSSTOG00000000322	RBFOX1	100	97.985	ENSHGLG00000016944	RBFOX1	100	97.985	Heterocephalus_glaber_female
ENSSTOG00000000322	RBFOX1	100	97.985	ENSHGLG00100003272	RBFOX1	100	97.985	Heterocephalus_glaber_male
ENSSTOG00000000322	RBFOX1	86	70.893	ENSHCOG00000016419	rbfox1	91	70.977	Hippocampus_comes
ENSSTOG00000000322	RBFOX1	100	80.053	ENSIPUG00000015215	rbfox1	100	83.024	Ictalurus_punctatus
ENSSTOG00000000322	RBFOX1	100	93.703	ENSJJAG00000002575	Rbfox1	100	93.703	Jaculus_jaculus
ENSSTOG00000000322	RBFOX1	99	73.697	ENSLBEG00000014659	rbfox1	99	73.449	Labrus_bergylta
ENSSTOG00000000322	RBFOX1	98	86.260	ENSLOCG00000006675	rbfox1	99	86.260	Lepisosteus_oculatus
ENSSTOG00000000322	RBFOX1	78	98.052	ENSLAFG00000011480	RBFOX1	100	98.377	Loxodonta_africana
ENSSTOG00000000322	RBFOX1	100	96.651	ENSMFAG00000036447	RBFOX1	100	96.651	Macaca_fascicularis
ENSSTOG00000000322	RBFOX1	100	96.651	ENSMMUG00000003458	RBFOX1	99	97.826	Macaca_mulatta
ENSSTOG00000000322	RBFOX1	100	97.074	ENSMNEG00000032034	RBFOX1	100	96.651	Macaca_nemestrina
ENSSTOG00000000322	RBFOX1	100	96.890	ENSMLEG00000015382	RBFOX1	100	96.890	Mandrillus_leucophaeus
ENSSTOG00000000322	RBFOX1	96	75.255	ENSMAMG00000003142	rbfox1	100	75.765	Mastacembelus_armatus
ENSSTOG00000000322	RBFOX1	77	87.629	ENSMGAG00000008606	RBFOX1	98	87.413	Meleagris_gallopavo
ENSSTOG00000000322	RBFOX1	99	57.071	ENSMAUG00000020570	Rbfox1	99	56.061	Mesocricetus_auratus
ENSSTOG00000000322	RBFOX1	100	94.960	ENSMICG00000034286	RBFOX1	100	94.960	Microcebus_murinus
ENSSTOG00000000322	RBFOX1	100	96.977	ENSMOCG00000020932	Rbfox1	100	96.977	Microtus_ochrogaster
ENSSTOG00000000322	RBFOX1	87	71.304	ENSMMOG00000009716	rbfox1	86	71.976	Mola_mola
ENSSTOG00000000322	RBFOX1	94	96.610	ENSMODG00000005826	RBFOX1	100	96.610	Monodelphis_domestica
ENSSTOG00000000322	RBFOX1	100	76.039	ENSMALG00000003337	rbfox1	100	76.039	Monopterus_albus
ENSSTOG00000000322	RBFOX1	100	97.229	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.229	Mus_caroli
ENSSTOG00000000322	RBFOX1	100	97.481	ENSMUSG00000008658	Rbfox1	100	100.000	Mus_musculus
ENSSTOG00000000322	RBFOX1	100	97.229	MGP_PahariEiJ_G0016135	Rbfox1	100	97.229	Mus_pahari
ENSSTOG00000000322	RBFOX1	100	97.229	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.229	Mus_spretus
ENSSTOG00000000322	RBFOX1	97	97.814	ENSMPUG00000014822	RBFOX1	93	97.814	Mustela_putorius_furo
ENSSTOG00000000322	RBFOX1	78	98.697	ENSMLUG00000015896	RBFOX1	100	98.697	Myotis_lucifugus
ENSSTOG00000000322	RBFOX1	100	96.890	ENSNGAG00000023276	Rbfox1	100	97.680	Nannospalax_galili
ENSSTOG00000000322	RBFOX1	99	59.518	ENSNBRG00000011084	rbfox1	98	59.302	Neolamprologus_brichardi
ENSSTOG00000000322	RBFOX1	100	96.651	ENSNLEG00000010017	-	100	96.651	Nomascus_leucogenys
ENSSTOG00000000322	RBFOX1	100	78.947	ENSMEUG00000012525	RBFOX1	100	78.947	Notamacropus_eugenii
ENSSTOG00000000322	RBFOX1	100	78.947	ENSOPRG00000006199	-	100	77.751	Ochotona_princeps
ENSSTOG00000000322	RBFOX1	100	96.977	ENSODEG00000013166	RBFOX1	100	96.977	Octodon_degus
ENSSTOG00000000322	RBFOX1	100	94.415	ENSOANG00000002379	RBFOX1	100	94.415	Ornithorhynchus_anatinus
ENSSTOG00000000322	RBFOX1	58	96.313	ENSOCUG00000001205	-	100	93.778	Oryctolagus_cuniculus
ENSSTOG00000000322	RBFOX1	100	96.222	ENSOGAG00000025535	RBFOX1	100	96.222	Otolemur_garnettii
ENSSTOG00000000322	RBFOX1	65	85.246	ENSOARG00000005135	RBFOX1	100	83.665	Ovis_aries
ENSSTOG00000000322	RBFOX1	98	97.938	ENSPPAG00000036238	-	100	97.938	Pan_paniscus
ENSSTOG00000000322	RBFOX1	100	96.890	ENSPPRG00000006546	RBFOX1	100	96.890	Panthera_pardus
ENSSTOG00000000322	RBFOX1	100	85.390	ENSPTIG00000021154	RBFOX1	99	85.604	Panthera_tigris_altaica
ENSSTOG00000000322	RBFOX1	100	96.890	ENSPTRG00000007744	RBFOX1	100	96.890	Pan_troglodytes
ENSSTOG00000000322	RBFOX1	100	96.890	ENSPANG00000026500	RBFOX1	100	96.890	Papio_anubis
ENSSTOG00000000322	RBFOX1	80	83.056	ENSPKIG00000019353	rbfox1	88	83.056	Paramormyrops_kingsleyae
ENSSTOG00000000322	RBFOX1	100	81.955	ENSPKIG00000009667	-	98	82.834	Paramormyrops_kingsleyae
ENSSTOG00000000322	RBFOX1	100	92.386	ENSPSIG00000006523	RBFOX1	98	93.130	Pelodiscus_sinensis
ENSSTOG00000000322	RBFOX1	100	97.229	ENSPEMG00000017607	Rbfox1	100	97.229	Peromyscus_maniculatus_bairdii
ENSSTOG00000000322	RBFOX1	74	92.069	ENSPCIG00000026887	RBFOX1	100	92.069	Phascolarctos_cinereus
ENSSTOG00000000322	RBFOX1	97	98.087	ENSPPYG00000007079	-	93	98.087	Pongo_abelii
ENSSTOG00000000322	RBFOX1	90	88.095	ENSPCAG00000002630	RBFOX1	100	88.095	Procavia_capensis
ENSSTOG00000000322	RBFOX1	100	96.890	ENSPCOG00000025687	RBFOX1	100	96.890	Propithecus_coquereli
ENSSTOG00000000322	RBFOX1	100	92.823	ENSPVAG00000013467	RBFOX1	100	92.823	Pteropus_vampyrus
ENSSTOG00000000322	RBFOX1	96	80.556	ENSPNAG00000023109	rbfox1	100	80.556	Pygocentrus_nattereri
ENSSTOG00000000322	RBFOX1	98	96.410	ENSRNOG00000002827	Rbfox1	100	93.780	Rattus_norvegicus
ENSSTOG00000000322	RBFOX1	100	97.340	ENSRBIG00000044478	RBFOX1	100	97.938	Rhinopithecus_bieti
ENSSTOG00000000322	RBFOX1	100	96.890	ENSRROG00000044411	RBFOX1	100	96.890	Rhinopithecus_roxellana
ENSSTOG00000000322	RBFOX1	99	96.947	ENSSBOG00000033726	RBFOX1	98	96.947	Saimiri_boliviensis_boliviensis
ENSSTOG00000000322	RBFOX1	100	91.940	ENSSHAG00000009257	RBFOX1	100	91.940	Sarcophilus_harrisii
ENSSTOG00000000322	RBFOX1	89	69.806	ENSSFOG00015009955	-	87	68.717	Scleropages_formosus
ENSSTOG00000000322	RBFOX1	98	67.684	ENSSFOG00015023675	rbfox1	97	87.778	Scleropages_formosus
ENSSTOG00000000322	RBFOX1	100	75.366	ENSSMAG00000015505	rbfox1	96	73.223	Scophthalmus_maximus
ENSSTOG00000000322	RBFOX1	100	73.116	ENSSDUG00000016413	rbfox1	99	74.490	Seriola_dumerili
ENSSTOG00000000322	RBFOX1	86	72.647	ENSSLDG00000009353	rbfox1	97	72.321	Seriola_lalandi_dorsalis
ENSSTOG00000000322	RBFOX1	86	82.059	ENSSPUG00000009732	RBFOX1	87	82.111	Sphenodon_punctatus
ENSSTOG00000000322	RBFOX1	98	76.355	ENSSPAG00000009723	rbfox1	100	76.108	Stegastes_partitus
ENSSTOG00000000322	RBFOX1	97	96.790	ENSSSCG00000007917	RBFOX1	100	98.305	Sus_scrofa
ENSSTOG00000000322	RBFOX1	99	93.316	ENSTGUG00000004562	RBFOX1	100	93.830	Taeniopygia_guttata
ENSSTOG00000000322	RBFOX1	98	75.862	ENSTRUG00000020940	rbfox1	99	75.862	Takifugu_rubripes
ENSSTOG00000000322	RBFOX1	68	57.325	ENSTNIG00000002567	rbfox1	100	58.917	Tetraodon_nigroviridis
ENSSTOG00000000322	RBFOX1	81	86.207	ENSTBEG00000009169	-	81	86.207	Tupaia_belangeri
ENSSTOG00000000322	RBFOX1	100	96.890	ENSTTRG00000005700	RBFOX1	100	96.890	Tursiops_truncatus
ENSSTOG00000000322	RBFOX1	100	93.909	ENSUAMG00000024633	RBFOX1	100	93.909	Ursus_americanus
ENSSTOG00000000322	RBFOX1	100	85.025	ENSUMAG00000003579	RBFOX1	100	85.025	Ursus_maritimus
ENSSTOG00000000322	RBFOX1	81	98.377	ENSVPAG00000001284	RBFOX1	81	98.377	Vicugna_pacos
ENSSTOG00000000322	RBFOX1	100	97.340	ENSVVUG00000017311	RBFOX1	100	97.340	Vulpes_vulpes