EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000000587 (Gene tree)
Gene ID: 101955351
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 60921 bases
Position: chrJH393294.1:13238528-13299448
Accession: 28987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000021307	La	PF05383.17	1.7e-14	1	1
ENSSTOP00000000533	La	PF05383.17	2.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000000587	LARP4B-201	2166	XM_013356357	ENSSTOP00000000533	721 (aa)	-	I3LWZ2
ENSSTOT00000024867	LARP4B-202	1914	-	ENSSTOP00000021307	637 (aa)	-	I3NAB0

Gene Model

Click here to download ENSSTOG00000000587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000000587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000000587	LARP4B	89	50.390	ENSSTOG00000003553	LARP4	93	50.390

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000000587	LARP4B	100	86.081	ENSG00000107929	LARP4B	100	91.228	Homo_sapiens
ENSSTOG00000000587	LARP4B	100	62.410	ENSAPOG00000020531	LARP4B	100	57.392	Acanthochromis_polyacanthus
ENSSTOG00000000587	LARP4B	100	83.558	ENSAMEG00000001810	LARP4B	100	83.558	Ailuropoda_melanoleuca
ENSSTOG00000000587	LARP4B	92	64.595	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSSTOG00000000587	LARP4B	93	56.671	ENSAPEG00000002512	LARP4B	98	55.826	Amphiprion_percula
ENSSTOG00000000587	LARP4B	95	61.655	ENSATEG00000012614	LARP4B	100	53.865	Anabas_testudineus
ENSSTOG00000000587	LARP4B	100	75.665	ENSAPLG00000003813	LARP4B	98	75.665	Anas_platyrhynchos
ENSSTOG00000000587	LARP4B	100	80.000	ENSACAG00000002858	LARP4B	100	73.832	Anolis_carolinensis
ENSSTOG00000000587	LARP4B	100	85.541	ENSANAG00000007531	-	100	85.541	Aotus_nancymaae
ENSSTOG00000000587	LARP4B	100	59.200	ENSACLG00000026356	LARP4B	100	59.467	Astatotilapia_calliptera
ENSSTOG00000000587	LARP4B	95	58.782	ENSAMXG00000003335	larp4b	97	50.273	Astyanax_mexicanus
ENSSTOG00000000587	LARP4B	100	80.811	ENSBTAG00000013899	LARP4B	100	80.811	Bos_taurus
ENSSTOG00000000587	LARP4B	100	85.270	ENSCJAG00000018434	LARP4B	100	85.270	Callithrix_jacchus
ENSSTOG00000000587	LARP4B	100	84.232	ENSCAFG00020004209	LARP4B	100	84.232	Canis_lupus_dingo
ENSSTOG00000000587	LARP4B	100	80.541	ENSCHIG00000013543	LARP4B	100	80.541	Capra_hircus
ENSSTOG00000000587	LARP4B	80	86.745	ENSTSYG00000002568	LARP4B	100	86.745	Carlito_syrichta
ENSSTOG00000000587	LARP4B	84	87.810	ENSCAPG00000009725	LARP4B	87	87.810	Cavia_aperea
ENSSTOG00000000587	LARP4B	100	94.647	ENSCPOG00000009375	LARP4B	100	88.243	Cavia_porcellus
ENSSTOG00000000587	LARP4B	100	85.135	ENSCCAG00000024869	LARP4B	100	85.135	Cebus_capucinus
ENSSTOG00000000587	LARP4B	100	86.351	ENSCATG00000019750	LARP4B	100	86.351	Cercocebus_atys
ENSSTOG00000000587	LARP4B	100	95.388	ENSCLAG00000011570	LARP4B	100	88.394	Chinchilla_lanigera
ENSSTOG00000000587	LARP4B	56	97.297	ENSCHOG00000007831	-	60	91.935	Choloepus_hoffmanni
ENSSTOG00000000587	LARP4B	100	74.301	ENSCPBG00000017063	LARP4B	100	74.301	Chrysemys_picta_bellii
ENSSTOG00000000587	LARP4B	100	84.324	ENSCANG00000038021	LARP4B	100	84.324	Colobus_angolensis_palliatus
ENSSTOG00000000587	LARP4B	100	88.410	ENSCGRG00001022930	Larp4b	100	88.410	Cricetulus_griseus_chok1gshd
ENSSTOG00000000587	LARP4B	100	88.410	ENSCGRG00000006022	Larp4b	100	88.410	Cricetulus_griseus_crigri
ENSSTOG00000000587	LARP4B	100	56.190	ENSCSEG00000007342	LARP4B	100	56.327	Cynoglossus_semilaevis
ENSSTOG00000000587	LARP4B	95	62.712	ENSCVAG00000008910	LARP4B	90	63.051	Cyprinodon_variegatus
ENSSTOG00000000587	LARP4B	88	58.962	ENSDARG00000062146	larp4b	92	50.943	Danio_rerio
ENSSTOG00000000587	LARP4B	93	92.877	ENSDNOG00000045543	-	100	92.742	Dasypus_novemcinctus
ENSSTOG00000000587	LARP4B	100	86.235	ENSDORG00000009328	Larp4b	100	86.235	Dipodomys_ordii
ENSSTOG00000000587	LARP4B	89	81.525	ENSETEG00000011249	LARP4B	91	81.525	Echinops_telfairi
ENSSTOG00000000587	LARP4B	100	84.076	ENSEASG00005019068	-	100	84.076	Equus_asinus_asinus
ENSSTOG00000000587	LARP4B	100	84.345	ENSECAG00000024040	LARP4B	100	84.345	Equus_caballus
ENSSTOG00000000587	LARP4B	100	80.376	ENSEEUG00000008391	LARP4B	98	80.376	Erinaceus_europaeus
ENSSTOG00000000587	LARP4B	86	49.373	ENSELUG00000001417	-	94	41.176	Esox_lucius
ENSSTOG00000000587	LARP4B	97	61.111	ENSELUG00000008626	LARP4B	93	61.438	Esox_lucius
ENSSTOG00000000587	LARP4B	100	83.602	ENSFCAG00000000721	-	100	83.871	Felis_catus
ENSSTOG00000000587	LARP4B	100	74.400	ENSFALG00000006961	LARP4B	100	74.400	Ficedula_albicollis
ENSSTOG00000000587	LARP4B	100	89.054	ENSFDAG00000006158	LARP4B	97	89.054	Fukomys_damarensis
ENSSTOG00000000587	LARP4B	100	51.181	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSSTOG00000000587	LARP4B	81	65.768	ENSGMOG00000010818	-	99	53.198	Gadus_morhua
ENSSTOG00000000587	LARP4B	100	74.801	ENSGALG00000006672	LARP4B	100	74.801	Gallus_gallus
ENSSTOG00000000587	LARP4B	100	56.995	ENSGACG00000017535	LARP4B	98	57.254	Gasterosteus_aculeatus
ENSSTOG00000000587	LARP4B	90	83.333	ENSGAGG00000008598	LARP4B	100	75.474	Gopherus_agassizii
ENSSTOG00000000587	LARP4B	100	86.351	ENSGGOG00000003572	LARP4B	100	86.351	Gorilla_gorilla
ENSSTOG00000000587	LARP4B	100	54.887	ENSHBUG00000007535	LARP4B	100	55.639	Haplochromis_burtoni
ENSSTOG00000000587	LARP4B	100	96.126	ENSHGLG00000012936	LARP4B	100	96.126	Heterocephalus_glaber_female
ENSSTOG00000000587	LARP4B	86	81.265	ENSHGLG00100017261	-	100	75.943	Heterocephalus_glaber_male
ENSSTOG00000000587	LARP4B	100	96.350	ENSHGLG00100016220	-	100	89.595	Heterocephalus_glaber_male
ENSSTOG00000000587	LARP4B	99	61.836	ENSHCOG00000011581	LARP4B	89	55.214	Hippocampus_comes
ENSSTOG00000000587	LARP4B	91	51.982	ENSIPUG00000009705	larp4b	93	51.906	Ictalurus_punctatus
ENSSTOG00000000587	LARP4B	100	87.703	ENSJJAG00000020847	Larp4b	100	87.703	Jaculus_jaculus
ENSSTOG00000000587	LARP4B	94	66.310	ENSKMAG00000021674	LARP4B	97	59.163	Kryptolebias_marmoratus
ENSSTOG00000000587	LARP4B	78	62.162	ENSLBEG00000025293	-	78	63.238	Labrus_bergylta
ENSSTOG00000000587	LARP4B	91	65.652	ENSLACG00000009492	LARP4B	100	65.507	Latimeria_chalumnae
ENSSTOG00000000587	LARP4B	100	64.621	ENSLOCG00000012290	larp4b	100	64.748	Lepisosteus_oculatus
ENSSTOG00000000587	LARP4B	100	89.904	ENSLAFG00000015334	LARP4B	100	84.161	Loxodonta_africana
ENSSTOG00000000587	LARP4B	100	86.351	ENSMFAG00000001766	LARP4B	100	84.189	Macaca_fascicularis
ENSSTOG00000000587	LARP4B	100	86.351	ENSMMUG00000005279	LARP4B	100	86.351	Macaca_mulatta
ENSSTOG00000000587	LARP4B	100	86.216	ENSMNEG00000014019	LARP4B	100	84.054	Macaca_nemestrina
ENSSTOG00000000587	LARP4B	100	85.965	ENSMLEG00000035198	LARP4B	100	85.965	Mandrillus_leucophaeus
ENSSTOG00000000587	LARP4B	96	61.269	ENSMAMG00000013742	LARP4B	100	52.970	Mastacembelus_armatus
ENSSTOG00000000587	LARP4B	91	55.464	ENSMZEG00005014594	-	100	56.148	Maylandia_zebra
ENSSTOG00000000587	LARP4B	84	75.862	ENSMZEG00005006498	-	93	75.862	Maylandia_zebra
ENSSTOG00000000587	LARP4B	100	75.968	ENSMGAG00000005472	LARP4B	100	75.701	Meleagris_gallopavo
ENSSTOG00000000587	LARP4B	100	88.606	ENSMAUG00000021657	Larp4b	100	94.912	Mesocricetus_auratus
ENSSTOG00000000587	LARP4B	100	80.244	ENSMICG00000001301	LARP4B	100	80.244	Microcebus_murinus
ENSSTOG00000000587	LARP4B	100	78.591	ENSMOCG00000021452	Larp4b	100	78.591	Microtus_ochrogaster
ENSSTOG00000000587	LARP4B	84	75.862	ENSMMOG00000011253	-	93	75.862	Mola_mola
ENSSTOG00000000587	LARP4B	100	79.808	ENSMODG00000005957	LARP4B	100	72.427	Monodelphis_domestica
ENSSTOG00000000587	LARP4B	100	49.256	ENSMALG00000012432	LARP4B	100	50.474	Monopterus_albus
ENSSTOG00000000587	LARP4B	100	87.989	MGP_CAROLIEiJ_G0018216	Larp4b	100	95.246	Mus_caroli
ENSSTOG00000000587	LARP4B	100	87.752	ENSMUSG00000033499	Larp4b	100	94.912	Mus_musculus
ENSSTOG00000000587	LARP4B	100	88.259	MGP_PahariEiJ_G0019266	Larp4b	100	94.718	Mus_pahari
ENSSTOG00000000587	LARP4B	100	87.618	MGP_SPRETEiJ_G0019074	Larp4b	100	94.912	Mus_spretus
ENSSTOG00000000587	LARP4B	100	83.288	ENSMPUG00000016220	LARP4B	97	83.154	Mustela_putorius_furo
ENSSTOG00000000587	LARP4B	93	80.719	ENSMLUG00000005880	LARP4B	100	80.719	Myotis_lucifugus
ENSSTOG00000000587	LARP4B	100	87.805	ENSNGAG00000001750	Larp4b	100	87.805	Nannospalax_galili
ENSSTOG00000000587	LARP4B	84	75.862	ENSNBRG00000020018	LARP4B	93	75.862	Neolamprologus_brichardi
ENSSTOG00000000587	LARP4B	100	85.811	ENSNLEG00000013442	LARP4B	100	85.811	Nomascus_leucogenys
ENSSTOG00000000587	LARP4B	78	89.474	ENSMEUG00000013114	-	70	89.474	Notamacropus_eugenii
ENSSTOG00000000587	LARP4B	98	93.932	ENSOPRG00000003300	LARP4B	100	85.408	Ochotona_princeps
ENSSTOG00000000587	LARP4B	100	87.591	ENSODEG00000001109	LARP4B	100	91.579	Octodon_degus
ENSSTOG00000000587	LARP4B	100	68.150	ENSONIG00000017705	LARP4B	100	57.786	Oreochromis_niloticus
ENSSTOG00000000587	LARP4B	100	79.327	ENSOANG00000006100	LARP4B	100	74.499	Ornithorhynchus_anatinus
ENSSTOG00000000587	LARP4B	100	87.156	ENSOCUG00000004950	LARP4B	97	87.156	Oryctolagus_cuniculus
ENSSTOG00000000587	LARP4B	100	53.082	ENSORLG00000006080	LARP4B	100	53.333	Oryzias_latipes
ENSSTOG00000000587	LARP4B	100	52.994	ENSORLG00020020940	LARP4B	100	53.121	Oryzias_latipes_hni
ENSSTOG00000000587	LARP4B	100	53.197	ENSORLG00015020608	LARP4B	100	54.731	Oryzias_latipes_hsok
ENSSTOG00000000587	LARP4B	95	60.136	ENSOMEG00000019619	LARP4B	100	52.020	Oryzias_melastigma
ENSSTOG00000000587	LARP4B	93	85.867	ENSOGAG00000011540	LARP4B	100	81.402	Otolemur_garnettii
ENSSTOG00000000587	LARP4B	100	80.350	ENSOARG00000015320	LARP4B	98	80.350	Ovis_aries
ENSSTOG00000000587	LARP4B	100	85.811	ENSPPAG00000039232	LARP4B	100	85.811	Pan_paniscus
ENSSTOG00000000587	LARP4B	100	83.693	ENSPPRG00000009489	LARP4B	100	83.693	Panthera_pardus
ENSSTOG00000000587	LARP4B	100	83.693	ENSPTIG00000008543	LARP4B	100	83.693	Panthera_tigris_altaica
ENSSTOG00000000587	LARP4B	100	85.811	ENSPTRG00000002235	LARP4B	100	85.811	Pan_troglodytes
ENSSTOG00000000587	LARP4B	100	86.351	ENSPANG00000023546	LARP4B	100	84.189	Papio_anubis
ENSSTOG00000000587	LARP4B	99	55.137	ENSPKIG00000012368	LARP4B	99	55.397	Paramormyrops_kingsleyae
ENSSTOG00000000587	LARP4B	75	93.293	ENSPSIG00000005600	LARP4B	99	87.580	Pelodiscus_sinensis
ENSSTOG00000000587	LARP4B	97	60.476	ENSPMGG00000008261	LARP4B	91	54.318	Periophthalmus_magnuspinnatus
ENSSTOG00000000587	LARP4B	100	88.514	ENSPEMG00000014052	Larp4b	100	88.514	Peromyscus_maniculatus_bairdii
ENSSTOG00000000587	LARP4B	95	61.824	ENSPFOG00000000029	LARP4B	90	62.373	Poecilia_formosa
ENSSTOG00000000587	LARP4B	100	57.523	ENSPLAG00000002871	LARP4B	100	57.483	Poecilia_latipinna
ENSSTOG00000000587	LARP4B	95	61.720	ENSPMEG00000016361	LARP4B	90	62.267	Poecilia_mexicana
ENSSTOG00000000587	LARP4B	100	86.100	ENSPPYG00000002035	LARP4B	97	86.100	Pongo_abelii
ENSSTOG00000000587	LARP4B	100	89.104	ENSPCOG00000014688	LARP4B	100	83.897	Propithecus_coquereli
ENSSTOG00000000587	LARP4B	85	97.143	ENSPVAG00000009784	LARP4B	88	97.143	Pteropus_vampyrus
ENSSTOG00000000587	LARP4B	95	63.826	ENSPNYG00000024252	LARP4B	100	56.140	Pundamilia_nyererei
ENSSTOG00000000587	LARP4B	95	59.907	ENSPNAG00000028956	larp4b	97	51.653	Pygocentrus_nattereri
ENSSTOG00000000587	LARP4B	99	88.243	ENSRNOG00000015888	Larp4b	100	88.378	Rattus_norvegicus
ENSSTOG00000000587	LARP4B	100	86.081	ENSRBIG00000033294	LARP4B	100	86.081	Rhinopithecus_bieti
ENSSTOG00000000587	LARP4B	100	85.811	ENSRROG00000033879	LARP4B	100	85.811	Rhinopithecus_roxellana
ENSSTOG00000000587	LARP4B	100	79.865	ENSSBOG00000021109	LARP4B	100	79.865	Saimiri_boliviensis_boliviensis
ENSSTOG00000000587	LARP4B	100	80.815	ENSSHAG00000013392	LARP4B	100	74.533	Sarcophilus_harrisii
ENSSTOG00000000587	LARP4B	91	59.393	ENSSFOG00015003256	LARP4B	90	57.392	Scleropages_formosus
ENSSTOG00000000587	LARP4B	82	79.310	ENSSMAG00000005982	-	99	79.310	Scophthalmus_maximus
ENSSTOG00000000587	LARP4B	95	63.497	ENSSDUG00000006704	LARP4B	100	55.074	Seriola_dumerili
ENSSTOG00000000587	LARP4B	87	75.862	ENSSLDG00000020660	LARP4B	99	75.862	Seriola_lalandi_dorsalis
ENSSTOG00000000587	LARP4B	63	98.113	ENSSARG00000001243	-	79	98.113	Sorex_araneus
ENSSTOG00000000587	LARP4B	100	71.563	ENSSPUG00000002102	-	100	71.563	Sphenodon_punctatus
ENSSTOG00000000587	LARP4B	89	77.327	ENSSPUG00000013734	-	99	77.327	Sphenodon_punctatus
ENSSTOG00000000587	LARP4B	100	62.802	ENSSPAG00000014628	LARP4B	100	62.802	Stegastes_partitus
ENSSTOG00000000587	LARP4B	100	80.759	ENSSSCG00000011162	LARP4B	95	87.674	Sus_scrofa
ENSSTOG00000000587	LARP4B	100	74.967	ENSTGUG00000000811	-	100	74.967	Taeniopygia_guttata
ENSSTOG00000000587	LARP4B	86	66.586	ENSTNIG00000007991	LARP4B	87	66.427	Tetraodon_nigroviridis
ENSSTOG00000000587	LARP4B	100	55.253	ENSTNIG00000004571	-	98	55.584	Tetraodon_nigroviridis
ENSSTOG00000000587	LARP4B	86	91.147	ENSTTRG00000011151	LARP4B	84	91.147	Tursiops_truncatus
ENSSTOG00000000587	LARP4B	88	84.074	ENSUAMG00000016461	LARP4B	95	84.074	Ursus_americanus
ENSSTOG00000000587	LARP4B	100	84.232	ENSUMAG00000016127	LARP4B	100	84.232	Ursus_maritimus
ENSSTOG00000000587	LARP4B	53	95.506	ENSVPAG00000000128	-	73	95.506	Vicugna_pacos
ENSSTOG00000000587	LARP4B	100	84.097	ENSVVUG00000008641	LARP4B	100	84.097	Vulpes_vulpes
ENSSTOG00000000587	LARP4B	99	76.134	ENSXETG00000016882	larp4b	100	68.956	Xenopus_tropicalis
ENSSTOG00000000587	LARP4B	100	53.101	ENSXCOG00000019952	LARP4B	100	53.222	Xiphophorus_couchianus
ENSSTOG00000000587	LARP4B	95	61.486	ENSXMAG00000021533	LARP4B	100	53.625	Xiphophorus_maculatus