EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000000589 (Gene tree)
Gene ID: 101960214
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 75812 bases
Position: chrJH393430.1:4069934-4145745
Accession: 101960214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000000539	XRN_N	PF03159.18	1.2e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000000593	XRN2-201	4016	XM_005334610	ENSSTOP00000000539	950 (aa)	XP_005334667	I3LWZ8

Gene Model

Click here to download ENSSTOG00000000589's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000000589's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000000589	XRN2	71	39.592	ENSSTOG00000013552	XRN1	61	39.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000000589	XRN2	100	98.316	ENSG00000088930	XRN2	100	98.316	Homo_sapiens
ENSSTOG00000000589	XRN2	97	71.809	ENSAPOG00000009818	xrn2	100	70.558	Acanthochromis_polyacanthus
ENSSTOG00000000589	XRN2	100	98.211	ENSAMEG00000012581	XRN2	100	98.211	Ailuropoda_melanoleuca
ENSSTOG00000000589	XRN2	90	70.421	ENSACIG00000015047	xrn2	95	74.472	Amphilophus_citrinellus
ENSSTOG00000000589	XRN2	97	72.436	ENSAOCG00000023632	xrn2	100	71.168	Amphiprion_ocellaris
ENSSTOG00000000589	XRN2	97	72.264	ENSAPEG00000014871	xrn2	100	70.994	Amphiprion_percula
ENSSTOG00000000589	XRN2	95	71.831	ENSATEG00000001273	xrn2	97	71.142	Anabas_testudineus
ENSSTOG00000000589	XRN2	97	83.638	ENSAPLG00000013869	XRN2	99	84.069	Anas_platyrhynchos
ENSSTOG00000000589	XRN2	100	80.642	ENSACAG00000005565	XRN2	100	80.642	Anolis_carolinensis
ENSSTOG00000000589	XRN2	100	97.895	ENSANAG00000020126	XRN2	100	97.895	Aotus_nancymaae
ENSSTOG00000000589	XRN2	90	73.642	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSSTOG00000000589	XRN2	100	71.356	ENSAMXG00000018301	xrn2	100	71.356	Astyanax_mexicanus
ENSSTOG00000000589	XRN2	100	95.899	ENSBTAG00000011304	XRN2	100	95.899	Bos_taurus
ENSSTOG00000000589	XRN2	87	56.047	WBGene00006964	xrn-2	89	55.317	Caenorhabditis_elegans
ENSSTOG00000000589	XRN2	100	98.000	ENSCJAG00000005611	XRN2	100	98.000	Callithrix_jacchus
ENSSTOG00000000589	XRN2	100	98.211	ENSCAFG00000005185	XRN2	100	98.211	Canis_familiaris
ENSSTOG00000000589	XRN2	100	98.211	ENSCAFG00020027479	XRN2	100	98.211	Canis_lupus_dingo
ENSSTOG00000000589	XRN2	100	96.425	ENSCHIG00000006921	XRN2	100	96.425	Capra_hircus
ENSSTOG00000000589	XRN2	100	97.368	ENSTSYG00000008315	XRN2	100	97.368	Carlito_syrichta
ENSSTOG00000000589	XRN2	97	82.632	ENSCAPG00000010773	XRN2	99	82.524	Cavia_aperea
ENSSTOG00000000589	XRN2	100	98.105	ENSCPOG00000009407	XRN2	100	98.105	Cavia_porcellus
ENSSTOG00000000589	XRN2	100	98.526	ENSCATG00000040350	XRN2	100	98.526	Cercocebus_atys
ENSSTOG00000000589	XRN2	100	98.421	ENSCLAG00000013419	XRN2	100	98.421	Chinchilla_lanigera
ENSSTOG00000000589	XRN2	100	98.526	ENSCSAG00000011094	XRN2	100	98.526	Chlorocebus_sabaeus
ENSSTOG00000000589	XRN2	68	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSSTOG00000000589	XRN2	100	84.792	ENSCPBG00000023533	XRN2	100	85.417	Chrysemys_picta_bellii
ENSSTOG00000000589	XRN2	86	60.382	ENSCING00000022336	-	100	60.740	Ciona_intestinalis
ENSSTOG00000000589	XRN2	91	57.175	ENSCSAVG00000011217	-	100	61.597	Ciona_savignyi
ENSSTOG00000000589	XRN2	100	98.526	ENSCANG00000040240	XRN2	100	98.526	Colobus_angolensis_palliatus
ENSSTOG00000000589	XRN2	98	96.663	ENSCGRG00001010676	Xrn2	99	96.663	Cricetulus_griseus_chok1gshd
ENSSTOG00000000589	XRN2	97	95.901	ENSCGRG00000006378	Xrn2	99	95.901	Cricetulus_griseus_crigri
ENSSTOG00000000589	XRN2	54	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSSTOG00000000589	XRN2	89	71.724	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSSTOG00000000589	XRN2	100	69.815	ENSDARG00000101900	xrn2	96	77.820	Danio_rerio
ENSSTOG00000000589	XRN2	100	97.263	ENSDNOG00000001895	XRN2	100	97.263	Dasypus_novemcinctus
ENSSTOG00000000589	XRN2	100	95.789	ENSDORG00000005434	Xrn2	100	95.789	Dipodomys_ordii
ENSSTOG00000000589	XRN2	87	56.590	FBgn0031868	Rat1	87	56.953	Drosophila_melanogaster
ENSSTOG00000000589	XRN2	100	83.684	ENSETEG00000001740	XRN2	100	83.684	Echinops_telfairi
ENSSTOG00000000589	XRN2	84	71.394	ENSEBUG00000016136	xrn2	100	71.394	Eptatretus_burgeri
ENSSTOG00000000589	XRN2	100	97.895	ENSEASG00005002484	XRN2	100	97.895	Equus_asinus_asinus
ENSSTOG00000000589	XRN2	99	97.888	ENSECAG00000018988	XRN2	100	96.074	Equus_caballus
ENSSTOG00000000589	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSSTOG00000000589	XRN2	100	70.697	ENSELUG00000000552	xrn2	100	71.107	Esox_lucius
ENSSTOG00000000589	XRN2	100	98.105	ENSFCAG00000007970	XRN2	100	98.105	Felis_catus
ENSSTOG00000000589	XRN2	100	83.124	ENSFALG00000004508	XRN2	100	83.543	Ficedula_albicollis
ENSSTOG00000000589	XRN2	100	98.000	ENSFDAG00000016311	XRN2	100	98.000	Fukomys_damarensis
ENSSTOG00000000589	XRN2	54	69.656	ENSFHEG00000013039	xrn2	98	69.656	Fundulus_heteroclitus
ENSSTOG00000000589	XRN2	86	73.026	ENSGMOG00000013436	xrn2	100	73.026	Gadus_morhua
ENSSTOG00000000589	XRN2	100	83.246	ENSGALG00000008372	XRN2	100	83.246	Gallus_gallus
ENSSTOG00000000589	XRN2	89	73.953	ENSGAFG00000014284	xrn2	98	73.953	Gambusia_affinis
ENSSTOG00000000589	XRN2	87	74.760	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSSTOG00000000589	XRN2	100	84.583	ENSGAGG00000004884	XRN2	100	85.208	Gopherus_agassizii
ENSSTOG00000000589	XRN2	100	98.421	ENSGGOG00000013738	XRN2	100	98.421	Gorilla_gorilla
ENSSTOG00000000589	XRN2	54	74.472	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSSTOG00000000589	XRN2	100	97.053	ENSHGLG00000014831	XRN2	100	97.053	Heterocephalus_glaber_female
ENSSTOG00000000589	XRN2	100	97.053	ENSHGLG00100013130	XRN2	100	97.053	Heterocephalus_glaber_male
ENSSTOG00000000589	XRN2	99	68.219	ENSHCOG00000011994	xrn2	99	69.130	Hippocampus_comes
ENSSTOG00000000589	XRN2	100	70.031	ENSIPUG00000006639	xrn2	100	70.031	Ictalurus_punctatus
ENSSTOG00000000589	XRN2	100	97.263	ENSJJAG00000022128	Xrn2	100	97.263	Jaculus_jaculus
ENSSTOG00000000589	XRN2	54	79.688	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSSTOG00000000589	XRN2	94	76.881	ENSLACG00000008307	XRN2	99	79.509	Latimeria_chalumnae
ENSSTOG00000000589	XRN2	99	73.013	ENSLOCG00000016874	xrn2	100	73.013	Lepisosteus_oculatus
ENSSTOG00000000589	XRN2	100	96.211	ENSLAFG00000014624	XRN2	100	96.211	Loxodonta_africana
ENSSTOG00000000589	XRN2	100	98.526	ENSMFAG00000038122	XRN2	100	98.526	Macaca_fascicularis
ENSSTOG00000000589	XRN2	100	98.526	ENSMMUG00000011405	XRN2	100	98.526	Macaca_mulatta
ENSSTOG00000000589	XRN2	100	98.421	ENSMNEG00000040626	XRN2	100	98.421	Macaca_nemestrina
ENSSTOG00000000589	XRN2	100	98.421	ENSMLEG00000041897	XRN2	100	98.421	Mandrillus_leucophaeus
ENSSTOG00000000589	XRN2	95	73.014	ENSMAMG00000008633	xrn2	98	71.488	Mastacembelus_armatus
ENSSTOG00000000589	XRN2	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSSTOG00000000589	XRN2	99	81.667	ENSMGAG00000003196	XRN2	99	81.667	Meleagris_gallopavo
ENSSTOG00000000589	XRN2	100	97.263	ENSMAUG00000021842	Xrn2	100	97.263	Mesocricetus_auratus
ENSSTOG00000000589	XRN2	100	97.474	ENSMICG00000008126	XRN2	100	97.474	Microcebus_murinus
ENSSTOG00000000589	XRN2	100	96.316	ENSMOCG00000012588	Xrn2	100	96.316	Microtus_ochrogaster
ENSSTOG00000000589	XRN2	89	73.998	ENSMMOG00000017576	xrn2	96	74.383	Mola_mola
ENSSTOG00000000589	XRN2	100	91.263	ENSMODG00000006163	XRN2	100	91.263	Monodelphis_domestica
ENSSTOG00000000589	XRN2	91	72.584	ENSMALG00000011355	xrn2	99	72.584	Monopterus_albus
ENSSTOG00000000589	XRN2	100	95.584	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.584	Mus_caroli
ENSSTOG00000000589	XRN2	100	95.794	ENSMUSG00000027433	Xrn2	100	95.794	Mus_musculus
ENSSTOG00000000589	XRN2	100	95.584	MGP_PahariEiJ_G0025843	Xrn2	100	95.584	Mus_pahari
ENSSTOG00000000589	XRN2	100	95.794	MGP_SPRETEiJ_G0025318	Xrn2	100	95.794	Mus_spretus
ENSSTOG00000000589	XRN2	100	96.691	ENSMPUG00000001198	XRN2	93	96.691	Mustela_putorius_furo
ENSSTOG00000000589	XRN2	100	97.789	ENSMLUG00000001536	XRN2	100	97.789	Myotis_lucifugus
ENSSTOG00000000589	XRN2	100	97.263	ENSNGAG00000018138	Xrn2	100	97.263	Nannospalax_galili
ENSSTOG00000000589	XRN2	90	75.810	ENSNBRG00000008062	xrn2	97	75.810	Neolamprologus_brichardi
ENSSTOG00000000589	XRN2	100	98.421	ENSNLEG00000009991	XRN2	100	98.421	Nomascus_leucogenys
ENSSTOG00000000589	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSSTOG00000000589	XRN2	75	78.534	ENSOPRG00000001397	-	77	78.534	Ochotona_princeps
ENSSTOG00000000589	XRN2	98	88.889	ENSODEG00000000860	-	99	89.320	Octodon_degus
ENSSTOG00000000589	XRN2	100	98.000	ENSODEG00000010745	-	100	98.000	Octodon_degus
ENSSTOG00000000589	XRN2	100	71.649	ENSONIG00000018720	xrn2	100	71.856	Oreochromis_niloticus
ENSSTOG00000000589	XRN2	100	91.702	ENSOANG00000015673	XRN2	100	91.702	Ornithorhynchus_anatinus
ENSSTOG00000000589	XRN2	100	98.632	ENSOCUG00000013468	XRN2	100	98.632	Oryctolagus_cuniculus
ENSSTOG00000000589	XRN2	98	70.197	ENSORLG00000017213	xrn2	97	74.827	Oryzias_latipes
ENSSTOG00000000589	XRN2	98	70.010	ENSORLG00020001824	xrn2	100	69.675	Oryzias_latipes_hni
ENSSTOG00000000589	XRN2	98	69.990	ENSORLG00015019747	xrn2	100	69.654	Oryzias_latipes_hsok
ENSSTOG00000000589	XRN2	90	73.873	ENSOMEG00000019820	xrn2	100	69.036	Oryzias_melastigma
ENSSTOG00000000589	XRN2	100	97.266	ENSOGAG00000001068	XRN2	100	97.266	Otolemur_garnettii
ENSSTOG00000000589	XRN2	97	96.220	ENSOARG00000004443	XRN2	100	96.220	Ovis_aries
ENSSTOG00000000589	XRN2	100	98.421	ENSPPAG00000033549	XRN2	100	98.421	Pan_paniscus
ENSSTOG00000000589	XRN2	100	98.105	ENSPPRG00000008732	XRN2	100	98.105	Panthera_pardus
ENSSTOG00000000589	XRN2	97	98.054	ENSPTIG00000015683	XRN2	97	98.054	Panthera_tigris_altaica
ENSSTOG00000000589	XRN2	100	98.421	ENSPTRG00000013308	XRN2	100	98.421	Pan_troglodytes
ENSSTOG00000000589	XRN2	100	98.526	ENSPANG00000018088	XRN2	100	98.526	Papio_anubis
ENSSTOG00000000589	XRN2	100	71.034	ENSPKIG00000016889	xrn2	100	71.034	Paramormyrops_kingsleyae
ENSSTOG00000000589	XRN2	81	87.630	ENSPSIG00000014666	XRN2	100	87.630	Pelodiscus_sinensis
ENSSTOG00000000589	XRN2	100	96.211	ENSPEMG00000000111	Xrn2	100	96.211	Peromyscus_maniculatus_bairdii
ENSSTOG00000000589	XRN2	100	70.301	ENSPFOG00000004182	xrn2	99	70.704	Poecilia_formosa
ENSSTOG00000000589	XRN2	89	74.651	ENSPLAG00000007351	xrn2	96	74.651	Poecilia_latipinna
ENSSTOG00000000589	XRN2	94	68.662	ENSPMEG00000011798	xrn2	99	69.532	Poecilia_mexicana
ENSSTOG00000000589	XRN2	89	74.535	ENSPREG00000012452	xrn2	99	72.952	Poecilia_reticulata
ENSSTOG00000000589	XRN2	100	98.000	ENSPPYG00000010755	XRN2	100	98.000	Pongo_abelii
ENSSTOG00000000589	XRN2	100	91.176	ENSPCAG00000011191	XRN2	100	91.176	Procavia_capensis
ENSSTOG00000000589	XRN2	100	90.947	ENSPCOG00000016468	XRN2	100	90.947	Propithecus_coquereli
ENSSTOG00000000589	XRN2	93	95.441	ENSPVAG00000004596	XRN2	93	95.441	Pteropus_vampyrus
ENSSTOG00000000589	XRN2	90	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSSTOG00000000589	XRN2	100	71.429	ENSPNAG00000010956	xrn2	99	71.429	Pygocentrus_nattereri
ENSSTOG00000000589	XRN2	100	96.740	ENSRNOG00000011785	Xrn2	100	96.740	Rattus_norvegicus
ENSSTOG00000000589	XRN2	86	98.533	ENSRBIG00000036193	XRN2	100	98.533	Rhinopithecus_bieti
ENSSTOG00000000589	XRN2	100	98.526	ENSRROG00000044400	XRN2	90	98.526	Rhinopithecus_roxellana
ENSSTOG00000000589	XRN2	77	48.069	YOR048C	RAT1	63	54.087	Saccharomyces_cerevisiae
ENSSTOG00000000589	XRN2	100	98.211	ENSSBOG00000021014	XRN2	100	98.211	Saimiri_boliviensis_boliviensis
ENSSTOG00000000589	XRN2	100	72.136	ENSSFOG00015001091	xrn2	100	72.136	Scleropages_formosus
ENSSTOG00000000589	XRN2	92	73.363	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSSTOG00000000589	XRN2	91	72.172	ENSSDUG00000012802	xrn2	99	72.511	Seriola_dumerili
ENSSTOG00000000589	XRN2	93	73.785	ENSSLDG00000021273	xrn2	100	73.785	Seriola_lalandi_dorsalis
ENSSTOG00000000589	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSSTOG00000000589	XRN2	98	79.915	ENSSPUG00000005485	XRN2	96	80.021	Sphenodon_punctatus
ENSSTOG00000000589	XRN2	100	70.642	ENSSPAG00000016027	xrn2	99	70.829	Stegastes_partitus
ENSSTOG00000000589	XRN2	100	95.789	ENSSSCG00000007109	XRN2	100	95.789	Sus_scrofa
ENSSTOG00000000589	XRN2	100	81.942	ENSTGUG00000007535	XRN2	100	82.359	Taeniopygia_guttata
ENSSTOG00000000589	XRN2	100	68.214	ENSTRUG00000015489	xrn2	100	68.586	Takifugu_rubripes
ENSSTOG00000000589	XRN2	100	71.443	ENSTNIG00000010712	xrn2	100	71.443	Tetraodon_nigroviridis
ENSSTOG00000000589	XRN2	100	97.368	ENSTBEG00000004119	XRN2	100	97.368	Tupaia_belangeri
ENSSTOG00000000589	XRN2	93	97.838	ENSTTRG00000009087	XRN2	93	97.838	Tursiops_truncatus
ENSSTOG00000000589	XRN2	100	98.316	ENSUAMG00000024634	XRN2	100	98.316	Ursus_americanus
ENSSTOG00000000589	XRN2	97	98.054	ENSUMAG00000004012	XRN2	95	98.054	Ursus_maritimus
ENSSTOG00000000589	XRN2	89	89.941	ENSVPAG00000010694	XRN2	91	89.941	Vicugna_pacos
ENSSTOG00000000589	XRN2	100	98.526	ENSVVUG00000012178	XRN2	100	98.526	Vulpes_vulpes
ENSSTOG00000000589	XRN2	100	74.661	ENSXETG00000023501	xrn2	100	75.287	Xenopus_tropicalis
ENSSTOG00000000589	XRN2	100	68.654	ENSXMAG00000000242	xrn2	92	78.832	Xiphophorus_maculatus