EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000000606 (Gene tree)
Gene ID: 101954954
Gene Symbol: LSM10
Alias: MGC15749
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 2788 bases
Position: chrJH393284.1:18822327-18825114
Accession: 101954954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000000550	LSM	PF01423.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000000605	LSM10-201	815	XM_005317822	ENSSTOP00000000550	123 (aa)	XP_005317879	I3LX07

Gene Model

Click here to download ENSSTOG00000000606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000000606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000000606	LSM10	100	90.244	ENSG00000181817	LSM10	100	90.244	Homo_sapiens
ENSSTOG00000000606	LSM10	100	95.935	ENSAMEG00000019854	LSM10	100	95.935	Ailuropoda_melanoleuca
ENSSTOG00000000606	LSM10	94	67.241	ENSACIG00000015420	oscp1a	77	67.241	Amphilophus_citrinellus
ENSSTOG00000000606	LSM10	96	69.492	ENSAOCG00000015618	LSM10	98	69.492	Amphiprion_ocellaris
ENSSTOG00000000606	LSM10	95	64.103	ENSAOCG00000015607	LSM10	91	64.103	Amphiprion_ocellaris
ENSSTOG00000000606	LSM10	96	69.492	ENSAOCG00000014654	-	98	69.492	Amphiprion_ocellaris
ENSSTOG00000000606	LSM10	96	69.492	ENSAPEG00000021845	-	98	69.492	Amphiprion_percula
ENSSTOG00000000606	LSM10	95	64.103	ENSAPEG00000021851	LSM10	91	64.103	Amphiprion_percula
ENSSTOG00000000606	LSM10	93	64.035	ENSATEG00000006310	oscp1a	84	64.035	Anabas_testudineus
ENSSTOG00000000606	LSM10	100	67.480	ENSACAG00000001231	LSM10	100	67.480	Anolis_carolinensis
ENSSTOG00000000606	LSM10	100	91.057	ENSANAG00000018759	-	100	91.057	Aotus_nancymaae
ENSSTOG00000000606	LSM10	98	90.833	ENSANAG00000031489	-	98	90.833	Aotus_nancymaae
ENSSTOG00000000606	LSM10	96	67.797	ENSACLG00000004728	oscp1a	96	67.797	Astatotilapia_calliptera
ENSSTOG00000000606	LSM10	96	68.644	ENSAMXG00000025301	oscp1a	98	68.644	Astyanax_mexicanus
ENSSTOG00000000606	LSM10	98	95.000	ENSBTAG00000024096	LSM10	98	95.000	Bos_taurus
ENSSTOG00000000606	LSM10	100	90.244	ENSCJAG00000044880	LSM10	100	90.244	Callithrix_jacchus
ENSSTOG00000000606	LSM10	100	96.748	ENSCAFG00000003382	LSM10	100	96.748	Canis_familiaris
ENSSTOG00000000606	LSM10	100	96.748	ENSCAFG00020008920	LSM10	100	96.748	Canis_lupus_dingo
ENSSTOG00000000606	LSM10	98	95.000	ENSCHIG00000009398	LSM10	98	95.000	Capra_hircus
ENSSTOG00000000606	LSM10	100	93.496	ENSCAPG00000012567	LSM10	100	93.496	Cavia_aperea
ENSSTOG00000000606	LSM10	100	93.496	ENSCPOG00000039302	LSM10	100	93.496	Cavia_porcellus
ENSSTOG00000000606	LSM10	100	91.057	ENSCCAG00000018913	-	100	91.057	Cebus_capucinus
ENSSTOG00000000606	LSM10	98	90.833	ENSCCAG00000008378	-	98	90.833	Cebus_capucinus
ENSSTOG00000000606	LSM10	100	91.057	ENSCATG00000006589	LSM10	100	91.057	Cercocebus_atys
ENSSTOG00000000606	LSM10	100	95.935	ENSCLAG00000008633	LSM10	100	95.935	Chinchilla_lanigera
ENSSTOG00000000606	LSM10	100	91.057	ENSCSAG00000000134	LSM10	100	91.057	Chlorocebus_sabaeus
ENSSTOG00000000606	LSM10	100	90.400	ENSCHOG00000008615	LSM10	100	90.400	Choloepus_hoffmanni
ENSSTOG00000000606	LSM10	83	30.392	ENSCSAVG00000001896	-	87	30.392	Ciona_savignyi
ENSSTOG00000000606	LSM10	100	91.057	ENSCANG00000019928	LSM10	100	91.057	Colobus_angolensis_palliatus
ENSSTOG00000000606	LSM10	98	93.388	ENSCGRG00001004317	-	99	93.388	Cricetulus_griseus_chok1gshd
ENSSTOG00000000606	LSM10	93	83.761	ENSCGRG00001022673	-	94	83.761	Cricetulus_griseus_chok1gshd
ENSSTOG00000000606	LSM10	93	83.761	ENSCGRG00000015514	-	94	83.761	Cricetulus_griseus_crigri
ENSSTOG00000000606	LSM10	98	93.388	ENSCGRG00000014935	-	99	93.388	Cricetulus_griseus_crigri
ENSSTOG00000000606	LSM10	96	64.407	ENSCSEG00000010374	oscp1a	79	64.407	Cynoglossus_semilaevis
ENSSTOG00000000606	LSM10	97	64.706	ENSCVAG00000001536	oscp1a	90	64.706	Cyprinodon_variegatus
ENSSTOG00000000606	LSM10	69	72.941	ENSDARG00000109563	CABZ01074453.1	99	72.941	Danio_rerio
ENSSTOG00000000606	LSM10	98	72.727	ENSDARG00000101222	oscp1a	100	72.727	Danio_rerio
ENSSTOG00000000606	LSM10	99	93.443	ENSDNOG00000036662	LSM10	99	93.443	Dasypus_novemcinctus
ENSSTOG00000000606	LSM10	100	93.496	ENSDORG00000007579	Lsm10	100	93.496	Dipodomys_ordii
ENSSTOG00000000606	LSM10	100	91.870	ENSETEG00000005703	LSM10	100	91.870	Echinops_telfairi
ENSSTOG00000000606	LSM10	95	52.137	ENSEBUG00000001312	oscp1a	96	52.137	Eptatretus_burgeri
ENSSTOG00000000606	LSM10	100	95.122	ENSEASG00005012194	LSM10	100	95.122	Equus_asinus_asinus
ENSSTOG00000000606	LSM10	100	95.935	ENSECAG00000005071	LSM10	100	95.935	Equus_caballus
ENSSTOG00000000606	LSM10	100	94.309	ENSEEUG00000012032	LSM10	100	94.309	Erinaceus_europaeus
ENSSTOG00000000606	LSM10	98	69.421	ENSELUG00000007452	oscp1a	99	69.421	Esox_lucius
ENSSTOG00000000606	LSM10	100	70.732	ENSFALG00000000851	LSM10	100	70.732	Ficedula_albicollis
ENSSTOG00000000606	LSM10	100	92.683	ENSFDAG00000021056	LSM10	100	92.683	Fukomys_damarensis
ENSSTOG00000000606	LSM10	89	68.182	ENSFHEG00000001058	oscp1a	95	68.182	Fundulus_heteroclitus
ENSSTOG00000000606	LSM10	92	64.035	ENSGMOG00000019832	oscp1a	96	64.035	Gadus_morhua
ENSSTOG00000000606	LSM10	100	73.171	ENSGALG00000002127	LSM10	100	73.171	Gallus_gallus
ENSSTOG00000000606	LSM10	91	60.870	ENSGAFG00000016445	oscp1a	93	60.870	Gambusia_affinis
ENSSTOG00000000606	LSM10	96	65.254	ENSGACG00000002329	oscp1a	97	65.254	Gasterosteus_aculeatus
ENSSTOG00000000606	LSM10	100	72.358	ENSGAGG00000024848	LSM10	100	72.358	Gopherus_agassizii
ENSSTOG00000000606	LSM10	100	91.870	ENSGGOG00000003556	LSM10	100	91.870	Gorilla_gorilla
ENSSTOG00000000606	LSM10	96	67.797	ENSHBUG00000001722	oscp1a	96	67.797	Haplochromis_burtoni
ENSSTOG00000000606	LSM10	100	93.496	ENSHGLG00000011625	LSM10	100	93.496	Heterocephalus_glaber_female
ENSSTOG00000000606	LSM10	100	93.496	ENSHGLG00100001769	LSM10	100	93.496	Heterocephalus_glaber_male
ENSSTOG00000000606	LSM10	86	68.868	ENSIPUG00000005808	oscp1a	92	68.868	Ictalurus_punctatus
ENSSTOG00000000606	LSM10	98	66.116	ENSKMAG00000012143	oscp1a	99	66.116	Kryptolebias_marmoratus
ENSSTOG00000000606	LSM10	98	64.167	ENSLBEG00000017764	oscp1a	98	64.167	Labrus_bergylta
ENSSTOG00000000606	LSM10	100	73.984	ENSLACG00000015904	LSM10	95	73.984	Latimeria_chalumnae
ENSSTOG00000000606	LSM10	98	70.000	ENSLOCG00000018277	oscp1a	98	70.000	Lepisosteus_oculatus
ENSSTOG00000000606	LSM10	100	95.122	ENSLAFG00000009600	LSM10	100	95.122	Loxodonta_africana
ENSSTOG00000000606	LSM10	100	91.057	ENSMFAG00000009115	LSM10	100	91.057	Macaca_fascicularis
ENSSTOG00000000606	LSM10	100	91.057	ENSMMUG00000017338	LSM10	100	91.057	Macaca_mulatta
ENSSTOG00000000606	LSM10	100	91.057	ENSMNEG00000020023	LSM10	100	91.057	Macaca_nemestrina
ENSSTOG00000000606	LSM10	100	91.057	ENSMLEG00000025150	LSM10	100	91.057	Mandrillus_leucophaeus
ENSSTOG00000000606	LSM10	98	65.833	ENSMAMG00000004427	oscp1a	98	65.833	Mastacembelus_armatus
ENSSTOG00000000606	LSM10	96	67.797	ENSMZEG00005026307	oscp1a	96	67.797	Maylandia_zebra
ENSSTOG00000000606	LSM10	100	72.358	ENSMGAG00000015707	LSM10	100	72.358	Meleagris_gallopavo
ENSSTOG00000000606	LSM10	98	90.909	ENSMAUG00000016624	Lsm10	99	90.909	Mesocricetus_auratus
ENSSTOG00000000606	LSM10	98	91.736	ENSMOCG00000021943	Lsm10	99	91.736	Microtus_ochrogaster
ENSSTOG00000000606	LSM10	95	64.957	ENSMMOG00000013597	oscp1a	87	64.957	Mola_mola
ENSSTOG00000000606	LSM10	100	83.740	ENSMODG00000023328	LSM10	100	83.740	Monodelphis_domestica
ENSSTOG00000000606	LSM10	58	59.211	ENSMALG00000012661	oscp1a	60	59.211	Monopterus_albus
ENSSTOG00000000606	LSM10	98	92.562	MGP_CAROLIEiJ_G0026467	Lsm10	100	94.624	Mus_caroli
ENSSTOG00000000606	LSM10	98	93.388	ENSMUSG00000050188	Lsm10	100	95.699	Mus_musculus
ENSSTOG00000000606	LSM10	98	93.388	MGP_PahariEiJ_G0028798	Lsm10	100	95.699	Mus_pahari
ENSSTOG00000000606	LSM10	98	93.388	MGP_SPRETEiJ_G0027446	Lsm10	100	95.699	Mus_spretus
ENSSTOG00000000606	LSM10	100	96.748	ENSMPUG00000018593	LSM10	100	96.748	Mustela_putorius_furo
ENSSTOG00000000606	LSM10	100	91.057	ENSMLUG00000023895	LSM10	100	91.057	Myotis_lucifugus
ENSSTOG00000000606	LSM10	100	94.309	ENSNGAG00000015011	Lsm10	100	94.309	Nannospalax_galili
ENSSTOG00000000606	LSM10	96	68.644	ENSNBRG00000014306	oscp1a	96	68.644	Neolamprologus_brichardi
ENSSTOG00000000606	LSM10	100	91.870	ENSNLEG00000033754	LSM10	100	91.870	Nomascus_leucogenys
ENSSTOG00000000606	LSM10	100	83.740	ENSMEUG00000006313	LSM10	100	83.740	Notamacropus_eugenii
ENSSTOG00000000606	LSM10	100	89.431	ENSOPRG00000001699	LSM10	100	89.431	Ochotona_princeps
ENSSTOG00000000606	LSM10	100	95.935	ENSODEG00000019161	LSM10	100	95.935	Octodon_degus
ENSSTOG00000000606	LSM10	96	68.644	ENSONIG00000020904	oscp1a	97	68.644	Oreochromis_niloticus
ENSSTOG00000000606	LSM10	100	78.049	ENSOANG00000002066	LSM10	100	78.049	Ornithorhynchus_anatinus
ENSSTOG00000000606	LSM10	100	88.618	ENSOCUG00000005333	LSM10	100	88.618	Oryctolagus_cuniculus
ENSSTOG00000000606	LSM10	97	65.546	ENSORLG00000009504	oscp1a	98	65.546	Oryzias_latipes
ENSSTOG00000000606	LSM10	97	65.546	ENSORLG00020016201	oscp1a	98	65.546	Oryzias_latipes_hni
ENSSTOG00000000606	LSM10	97	66.387	ENSORLG00015007794	oscp1a	98	66.387	Oryzias_latipes_hsok
ENSSTOG00000000606	LSM10	100	95.935	ENSOGAG00000002653	LSM10	100	95.935	Otolemur_garnettii
ENSSTOG00000000606	LSM10	98	95.000	ENSOARG00000009596	LSM10	98	95.000	Ovis_aries
ENSSTOG00000000606	LSM10	100	90.244	ENSPPAG00000023465	LSM10	100	90.244	Pan_paniscus
ENSSTOG00000000606	LSM10	100	95.122	ENSPPRG00000014619	LSM10	100	95.122	Panthera_pardus
ENSSTOG00000000606	LSM10	100	95.122	ENSPTIG00000004613	LSM10	100	95.122	Panthera_tigris_altaica
ENSSTOG00000000606	LSM10	100	90.244	ENSPTRG00000000539	LSM10	100	90.244	Pan_troglodytes
ENSSTOG00000000606	LSM10	100	91.057	ENSPANG00000023172	LSM10	100	91.057	Papio_anubis
ENSSTOG00000000606	LSM10	98	66.667	ENSPKIG00000003728	oscp1a	97	66.667	Paramormyrops_kingsleyae
ENSSTOG00000000606	LSM10	100	72.358	ENSPSIG00000000590	LSM10	100	72.358	Pelodiscus_sinensis
ENSSTOG00000000606	LSM10	62	65.789	ENSPMGG00000015718	oscp1a	99	65.789	Periophthalmus_magnuspinnatus
ENSSTOG00000000606	LSM10	84	84.466	ENSPCIG00000014865	LSM10	76	84.466	Phascolarctos_cinereus
ENSSTOG00000000606	LSM10	91	67.857	ENSPFOG00000020490	oscp1a	95	67.857	Poecilia_formosa
ENSSTOG00000000606	LSM10	91	67.857	ENSPLAG00000016537	oscp1a	85	67.857	Poecilia_latipinna
ENSSTOG00000000606	LSM10	88	68.519	ENSPMEG00000000174	oscp1a	94	68.519	Poecilia_mexicana
ENSSTOG00000000606	LSM10	91	66.964	ENSPREG00000009899	oscp1a	85	66.964	Poecilia_reticulata
ENSSTOG00000000606	LSM10	100	91.057	ENSPPYG00000001539	LSM10	100	91.057	Pongo_abelii
ENSSTOG00000000606	LSM10	100	91.870	ENSPCAG00000002520	LSM10	100	91.870	Procavia_capensis
ENSSTOG00000000606	LSM10	100	91.870	ENSPVAG00000008644	LSM10	100	91.870	Pteropus_vampyrus
ENSSTOG00000000606	LSM10	96	67.797	ENSPNYG00000003138	oscp1a	96	67.797	Pundamilia_nyererei
ENSSTOG00000000606	LSM10	95	67.521	ENSPNAG00000028829	oscp1a	97	67.521	Pygocentrus_nattereri
ENSSTOG00000000606	LSM10	98	94.215	ENSRNOG00000025716	Lsm10	99	94.215	Rattus_norvegicus
ENSSTOG00000000606	LSM10	100	91.057	ENSRBIG00000001561	LSM10	100	91.057	Rhinopithecus_bieti
ENSSTOG00000000606	LSM10	100	91.057	ENSRROG00000011414	LSM10	100	91.057	Rhinopithecus_roxellana
ENSSTOG00000000606	LSM10	100	91.057	ENSSBOG00000036413	-	100	91.057	Saimiri_boliviensis_boliviensis
ENSSTOG00000000606	LSM10	100	83.740	ENSSHAG00000018056	LSM10	100	83.740	Sarcophilus_harrisii
ENSSTOG00000000606	LSM10	98	66.942	ENSSFOG00015019954	lsm10	99	66.942	Scleropages_formosus
ENSSTOG00000000606	LSM10	93	66.957	ENSSMAG00000001297	oscp1a	98	66.957	Scophthalmus_maximus
ENSSTOG00000000606	LSM10	98	64.463	ENSSDUG00000007090	oscp1a	98	64.463	Seriola_dumerili
ENSSTOG00000000606	LSM10	94	65.517	ENSSLDG00000000800	oscp1a	96	65.517	Seriola_lalandi_dorsalis
ENSSTOG00000000606	LSM10	100	91.200	ENSSARG00000004211	LSM10	100	92.800	Sorex_araneus
ENSSTOG00000000606	LSM10	94	67.241	ENSSPAG00000009229	oscp1a	96	67.241	Stegastes_partitus
ENSSTOG00000000606	LSM10	100	91.057	ENSSSCG00000038916	LSM10	100	91.057	Sus_scrofa
ENSSTOG00000000606	LSM10	99	71.311	ENSTGUG00000001600	-	100	71.311	Taeniopygia_guttata
ENSSTOG00000000606	LSM10	99	71.311	ENSTGUG00000001602	-	100	71.311	Taeniopygia_guttata
ENSSTOG00000000606	LSM10	97	67.227	ENSTRUG00000010531	oscp1a	96	67.227	Takifugu_rubripes
ENSSTOG00000000606	LSM10	100	91.057	ENSTBEG00000016674	LSM10	100	91.057	Tupaia_belangeri
ENSSTOG00000000606	LSM10	100	95.122	ENSUAMG00000020265	LSM10	100	95.122	Ursus_americanus
ENSSTOG00000000606	LSM10	100	95.122	ENSUMAG00000001438	LSM10	57	95.122	Ursus_maritimus
ENSSTOG00000000606	LSM10	100	96.748	ENSVVUG00000023209	LSM10	100	96.748	Vulpes_vulpes
ENSSTOG00000000606	LSM10	100	70.732	ENSXETG00000027631	lsm10	100	70.732	Xenopus_tropicalis
ENSSTOG00000000606	LSM10	98	59.375	ENSXCOG00000018776	oscp1a	81	59.375	Xiphophorus_couchianus
ENSSTOG00000000606	LSM10	88	65.741	ENSXMAG00000019963	oscp1a	86	65.741	Xiphophorus_maculatus