EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000002108 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 18329 bases
Position: chrJH393968.1:26407-44735
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000001876	CSD	PF00313.22	3.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000002106	-	939	XM_013366346	ENSSTOP00000001876	312 (aa)	-	I3LZS6

Gene Model

Click here to download ENSSTOG00000002108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000002108	-	88	82.927	ENSSTOG00000032577	-	81	83.624
ENSSTOG00000002108	-	84	55.311	ENSSTOG00000024314	-	83	53.480

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002108	-	88	86.411	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSSTOG00000002108	-	88	88.811	ENSAMEG00000009393	YBX3	81	88.811	Ailuropoda_melanoleuca
ENSSTOG00000002108	-	88	63.509	ENSAPLG00000003147	YBX3	100	63.509	Anas_platyrhynchos
ENSSTOG00000002108	-	88	86.760	ENSANAG00000024492	-	91	86.760	Aotus_nancymaae
ENSSTOG00000002108	-	88	50.714	ENSANAG00000033366	-	68	82.143	Aotus_nancymaae
ENSSTOG00000002108	-	96	80.064	ENSBTAG00000009663	YBX3	76	82.168	Bos_taurus
ENSSTOG00000002108	-	88	86.411	ENSCJAG00000021660	-	78	86.411	Callithrix_jacchus
ENSSTOG00000002108	-	73	92.500	ENSCJAG00000033824	-	82	92.500	Callithrix_jacchus
ENSSTOG00000002108	-	89	88.235	ENSCAFG00000013401	YBX3	88	87.681	Canis_familiaris
ENSSTOG00000002108	-	88	85.664	ENSCAFG00020006412	YBX3	76	85.664	Canis_lupus_dingo
ENSSTOG00000002108	-	96	77.143	ENSCHIG00000010863	YBX3	80	85.664	Capra_hircus
ENSSTOG00000002108	-	94	86.275	ENSTSYG00000004204	-	91	88.176	Carlito_syrichta
ENSSTOG00000002108	-	88	62.545	ENSTSYG00000035821	-	73	54.895	Carlito_syrichta
ENSSTOG00000002108	-	90	81.570	ENSCAPG00000015039	YBX3	95	81.570	Cavia_aperea
ENSSTOG00000002108	-	88	82.168	ENSCPOG00000011329	YBX3	84	82.168	Cavia_porcellus
ENSSTOG00000002108	-	88	86.063	ENSCCAG00000016469	YBX3	77	86.063	Cebus_capucinus
ENSSTOG00000002108	-	88	82.131	ENSCATG00000034411	YBX3	77	86.063	Cercocebus_atys
ENSSTOG00000002108	-	91	82.095	ENSCLAG00000016030	YBX3	97	82.095	Chinchilla_lanigera
ENSSTOG00000002108	-	88	86.063	ENSCSAG00000008744	YBX3	77	86.063	Chlorocebus_sabaeus
ENSSTOG00000002108	-	88	75.175	ENSCPBG00000014147	YBX3	80	74.825	Chrysemys_picta_bellii
ENSSTOG00000002108	-	88	86.411	ENSCANG00000036801	YBX3	91	86.411	Colobus_angolensis_palliatus
ENSSTOG00000002108	-	88	87.324	ENSCGRG00001016148	Ybx3	79	87.324	Cricetulus_griseus_chok1gshd
ENSSTOG00000002108	-	90	85.424	ENSCGRG00000004563	Ybx3	100	85.424	Cricetulus_griseus_crigri
ENSSTOG00000002108	-	88	86.268	ENSDORG00000009103	Ybx3	83	85.714	Dipodomys_ordii
ENSSTOG00000002108	-	87	77.273	ENSETEG00000002557	YBX3	99	76.056	Echinops_telfairi
ENSSTOG00000002108	-	88	81.469	ENSEASG00005014726	YBX3	76	81.469	Equus_asinus_asinus
ENSSTOG00000002108	-	88	85.315	ENSECAG00000013777	YBX3	77	85.315	Equus_caballus
ENSSTOG00000002108	-	87	81.944	ENSEEUG00000010415	YBX3	100	85.563	Erinaceus_europaeus
ENSSTOG00000002108	-	88	84.536	ENSFCAG00000027748	YBX3	77	88.502	Felis_catus
ENSSTOG00000002108	-	88	60.351	ENSFALG00000003661	YBX3	100	60.351	Ficedula_albicollis
ENSSTOG00000002108	-	97	74.763	ENSFDAG00000021192	YBX3	95	78.930	Fukomys_damarensis
ENSSTOG00000002108	-	88	64.000	ENSGALG00000031890	YBX3	54	98.864	Gallus_gallus
ENSSTOG00000002108	-	88	74.476	ENSGAGG00000017780	YBX3	80	73.776	Gopherus_agassizii
ENSSTOG00000002108	-	88	86.411	ENSGGOG00000001352	YBX3	77	86.411	Gorilla_gorilla
ENSSTOG00000002108	-	81	84.706	ENSHGLG00000015495	-	78	84.314	Heterocephalus_glaber_female
ENSSTOG00000002108	-	96	71.803	ENSHGLG00000014798	-	86	75.439	Heterocephalus_glaber_female
ENSSTOG00000002108	-	53	95.833	ENSHGLG00100003589	YBX3	90	61.268	Heterocephalus_glaber_male
ENSSTOG00000002108	-	88	60.751	ENSJJAG00000014239	Ybx3	77	83.750	Jaculus_jaculus
ENSSTOG00000002108	-	88	88.112	ENSLAFG00000017247	YBX3	85	83.217	Loxodonta_africana
ENSSTOG00000002108	-	88	86.063	ENSMFAG00000039369	YBX3	77	86.063	Macaca_fascicularis
ENSSTOG00000002108	-	88	82.131	ENSMMUG00000022469	YBX3	88	86.063	Macaca_mulatta
ENSSTOG00000002108	-	88	86.063	ENSMNEG00000045109	YBX3	77	86.063	Macaca_nemestrina
ENSSTOG00000002108	-	98	81.250	ENSMLEG00000033618	YBX3	84	85.763	Mandrillus_leucophaeus
ENSSTOG00000002108	-	88	63.869	ENSMGAG00000014224	YBX3	72	100.000	Meleagris_gallopavo
ENSSTOG00000002108	-	88	86.972	ENSMAUG00000012185	Ybx3	89	86.972	Mesocricetus_auratus
ENSSTOG00000002108	-	88	68.727	ENSMICG00000031459	-	76	67.636	Microcebus_murinus
ENSSTOG00000002108	-	88	88.462	ENSMICG00000038002	-	77	88.462	Microcebus_murinus
ENSSTOG00000002108	-	88	87.324	ENSMOCG00000016291	Ybx3	93	87.324	Microtus_ochrogaster
ENSSTOG00000002108	-	90	78.000	ENSMODG00000018248	YBX3	94	79.461	Monodelphis_domestica
ENSSTOG00000002108	-	88	86.972	MGP_CAROLIEiJ_G0028947	Ybx3	79	86.972	Mus_caroli
ENSSTOG00000002108	-	88	87.324	ENSMUSG00000030189	Ybx3	79	87.324	Mus_musculus
ENSSTOG00000002108	-	88	87.324	MGP_PahariEiJ_G0022709	Ybx3	79	87.324	Mus_pahari
ENSSTOG00000002108	-	88	87.324	MGP_SPRETEiJ_G0029994	Ybx3	79	87.324	Mus_spretus
ENSSTOG00000002108	-	88	67.224	ENSMPUG00000011810	YBX3	78	70.169	Mustela_putorius_furo
ENSSTOG00000002108	-	81	85.609	ENSMLUG00000007476	YBX3	100	85.609	Myotis_lucifugus
ENSSTOG00000002108	-	87	81.338	ENSNGAG00000000710	Ybx3	88	61.679	Nannospalax_galili
ENSSTOG00000002108	-	88	82.230	ENSNLEG00000034844	YBX3	81	82.230	Nomascus_leucogenys
ENSSTOG00000002108	-	55	79.191	ENSMEUG00000002507	-	85	77.348	Notamacropus_eugenii
ENSSTOG00000002108	-	88	77.622	ENSODEG00000017957	YBX3	84	77.622	Octodon_degus
ENSSTOG00000002108	-	88	82.168	ENSOCUG00000001889	YBX3	83	82.168	Oryctolagus_cuniculus
ENSSTOG00000002108	-	88	84.983	ENSOGAG00000013245	YBX3	78	84.983	Otolemur_garnettii
ENSSTOG00000002108	-	88	71.181	ENSOARG00000020919	YBX3	97	76.389	Ovis_aries
ENSSTOG00000002108	-	88	86.411	ENSPPAG00000039068	YBX3	80	86.411	Pan_paniscus
ENSSTOG00000002108	-	88	84.880	ENSPPRG00000005859	YBX3	77	88.850	Panthera_pardus
ENSSTOG00000002108	-	88	89.437	ENSPTIG00000005322	YBX3	83	88.435	Panthera_tigris_altaica
ENSSTOG00000002108	-	88	86.411	ENSPTRG00000004681	YBX3	77	86.411	Pan_troglodytes
ENSSTOG00000002108	-	88	82.131	ENSPANG00000010280	YBX3	77	86.063	Papio_anubis
ENSSTOG00000002108	-	55	99.038	ENSPSIG00000009247	YBX3	100	56.410	Pelodiscus_sinensis
ENSSTOG00000002108	-	88	86.014	ENSPEMG00000012132	-	90	87.676	Peromyscus_maniculatus_bairdii
ENSSTOG00000002108	-	50	98.864	ENSPEMG00000010391	-	82	63.636	Peromyscus_maniculatus_bairdii
ENSSTOG00000002108	-	79	76.062	ENSPCIG00000029949	YBX3	100	76.062	Phascolarctos_cinereus
ENSSTOG00000002108	-	88	86.063	ENSPPYG00000004279	YBX3	77	86.063	Pongo_abelii
ENSSTOG00000002108	-	56	95.429	ENSPCAG00000001397	YBX3	61	95.429	Procavia_capensis
ENSSTOG00000002108	-	56	90.857	ENSPCOG00000011663	YBX3	67	90.857	Propithecus_coquereli
ENSSTOG00000002108	-	88	87.676	ENSRNOG00000005480	Ybx3	79	87.676	Rattus_norvegicus
ENSSTOG00000002108	-	88	86.063	ENSRBIG00000039208	YBX3	77	86.063	Rhinopithecus_bieti
ENSSTOG00000002108	-	88	86.063	ENSRROG00000029638	YBX3	77	86.063	Rhinopithecus_roxellana
ENSSTOG00000002108	-	94	84.641	ENSSBOG00000030573	YBX3	86	86.780	Saimiri_boliviensis_boliviensis
ENSSTOG00000002108	-	88	76.976	ENSSHAG00000003262	YBX3	98	76.976	Sarcophilus_harrisii
ENSSTOG00000002108	-	88	84.192	ENSSSCG00000000633	YBX3	75	88.153	Sus_scrofa
ENSSTOG00000002108	-	88	61.268	ENSTGUG00000012047	YBX3	100	61.268	Taeniopygia_guttata
ENSSTOG00000002108	-	88	88.502	ENSTBEG00000012570	YBX3	82	84.950	Tupaia_belangeri
ENSSTOG00000002108	-	80	77.820	ENSTTRG00000008045	YBX3	100	78.195	Tursiops_truncatus
ENSSTOG00000002108	-	85	85.199	ENSUAMG00000016662	YBX3	100	84.477	Ursus_americanus
ENSSTOG00000002108	-	88	88.732	ENSUMAG00000016118	YBX3	97	88.475	Ursus_maritimus
ENSSTOG00000002108	-	87	64.236	ENSVPAG00000000876	YBX3	100	64.583	Vicugna_pacos
ENSSTOG00000002108	-	85	85.199	ENSVVUG00000004956	YBX3	100	84.477	Vulpes_vulpes