EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000002125 (Gene tree)
Gene ID: 101960212
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 5556 bases
Position: chrJH393412.1:3330142-3335697
Accession: 101960212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000001888	PseudoU_synth_2	PF00849.22	1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000002119	RPUSD3-201	2168	XM_005333820	ENSSTOP00000001888	352 (aa)	XP_005333877	I3LZT3

Gene Model

Click here to download ENSSTOG00000002125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002125's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000002125	RPUSD3	80	30.405	ENSSTOG00000025280	RPUSD4	76	30.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002125	RPUSD3	99	77.650	ENSG00000156990	RPUSD3	95	81.683	Homo_sapiens
ENSSTOG00000002125	RPUSD3	100	75.568	ENSAMEG00000016227	RPUSD3	100	75.568	Ailuropoda_melanoleuca
ENSSTOG00000002125	RPUSD3	80	53.004	ENSACAG00000009836	RPUSD3	80	53.004	Anolis_carolinensis
ENSSTOG00000002125	RPUSD3	53	79.787	ENSANAG00000038118	-	90	79.787	Aotus_nancymaae
ENSSTOG00000002125	RPUSD3	78	55.556	ENSANAG00000007127	-	96	59.406	Aotus_nancymaae
ENSSTOG00000002125	RPUSD3	71	66.798	ENSANAG00000019945	-	94	66.798	Aotus_nancymaae
ENSSTOG00000002125	RPUSD3	98	76.163	ENSBTAG00000007968	RPUSD3	100	76.163	Bos_taurus
ENSSTOG00000002125	RPUSD3	100	74.716	ENSCAFG00000029733	RPUSD3	100	74.716	Canis_familiaris
ENSSTOG00000002125	RPUSD3	100	74.716	ENSCAFG00020008582	RPUSD3	100	74.716	Canis_lupus_dingo
ENSSTOG00000002125	RPUSD3	98	75.000	ENSCHIG00000026027	RPUSD3	100	75.000	Capra_hircus
ENSSTOG00000002125	RPUSD3	98	72.000	ENSTSYG00000009994	RPUSD3	99	72.000	Carlito_syrichta
ENSSTOG00000002125	RPUSD3	75	79.468	ENSCAPG00000017559	RPUSD3	99	79.468	Cavia_aperea
ENSSTOG00000002125	RPUSD3	98	66.667	ENSCPOG00000037956	RPUSD3	91	66.667	Cavia_porcellus
ENSSTOG00000002125	RPUSD3	100	75.706	ENSCCAG00000029530	RPUSD3	95	82.673	Cebus_capucinus
ENSSTOG00000002125	RPUSD3	99	78.797	ENSCATG00000036939	RPUSD3	95	83.168	Cercocebus_atys
ENSSTOG00000002125	RPUSD3	99	78.223	ENSCSAG00000010506	RPUSD3	100	77.841	Chlorocebus_sabaeus
ENSSTOG00000002125	RPUSD3	50	83.036	ENSCHOG00000010151	-	67	83.036	Choloepus_hoffmanni
ENSSTOG00000002125	RPUSD3	73	53.307	ENSCPBG00000008825	RPUSD3	95	54.264	Chrysemys_picta_bellii
ENSSTOG00000002125	RPUSD3	99	77.077	ENSCANG00000040711	RPUSD3	95	82.178	Colobus_angolensis_palliatus
ENSSTOG00000002125	RPUSD3	98	71.387	ENSCGRG00001004923	Rpusd3	96	70.774	Cricetulus_griseus_chok1gshd
ENSSTOG00000002125	RPUSD3	97	71.930	ENSCGRG00000018315	Rpusd3	100	71.304	Cricetulus_griseus_crigri
ENSSTOG00000002125	RPUSD3	99	73.789	ENSDNOG00000039160	RPUSD3	93	73.789	Dasypus_novemcinctus
ENSSTOG00000002125	RPUSD3	74	75.000	ENSDORG00000026827	Rpusd3	92	75.000	Dipodomys_ordii
ENSSTOG00000002125	RPUSD3	100	70.170	ENSETEG00000006538	RPUSD3	99	70.170	Echinops_telfairi
ENSSTOG00000002125	RPUSD3	71	35.135	ENSEBUG00000015605	RPUSD3	82	35.135	Eptatretus_burgeri
ENSSTOG00000002125	RPUSD3	100	76.989	ENSEASG00005014160	RPUSD3	98	76.989	Equus_asinus_asinus
ENSSTOG00000002125	RPUSD3	100	77.273	ENSECAG00000019988	RPUSD3	98	77.273	Equus_caballus
ENSSTOG00000002125	RPUSD3	99	55.587	ENSEEUG00000007353	RPUSD3	100	55.587	Erinaceus_europaeus
ENSSTOG00000002125	RPUSD3	100	75.852	ENSFCAG00000014199	RPUSD3	100	75.852	Felis_catus
ENSSTOG00000002125	RPUSD3	77	48.897	ENSFALG00000012968	RPUSD3	99	49.265	Ficedula_albicollis
ENSSTOG00000002125	RPUSD3	75	79.545	ENSFDAG00000008350	RPUSD3	81	79.545	Fukomys_damarensis
ENSSTOG00000002125	RPUSD3	74	54.373	ENSGAGG00000007493	RPUSD3	82	55.303	Gopherus_agassizii
ENSSTOG00000002125	RPUSD3	99	77.650	ENSGGOG00000013120	RPUSD3	95	82.178	Gorilla_gorilla
ENSSTOG00000002125	RPUSD3	97	62.887	ENSHGLG00000011722	RPUSD3	99	62.887	Heterocephalus_glaber_female
ENSSTOG00000002125	RPUSD3	97	62.887	ENSHGLG00100016038	RPUSD3	99	62.887	Heterocephalus_glaber_male
ENSSTOG00000002125	RPUSD3	98	70.058	ENSJJAG00000012679	Rpusd3	100	70.058	Jaculus_jaculus
ENSSTOG00000002125	RPUSD3	98	77.907	ENSLAFG00000017501	RPUSD3	100	77.907	Loxodonta_africana
ENSSTOG00000002125	RPUSD3	99	78.223	ENSMFAG00000032407	RPUSD3	99	78.223	Macaca_fascicularis
ENSSTOG00000002125	RPUSD3	99	74.212	ENSMMUG00000010628	RPUSD3	96	83.172	Macaca_mulatta
ENSSTOG00000002125	RPUSD3	99	77.937	ENSMNEG00000040308	RPUSD3	99	77.937	Macaca_nemestrina
ENSSTOG00000002125	RPUSD3	99	78.797	ENSMLEG00000033940	RPUSD3	95	83.168	Mandrillus_leucophaeus
ENSSTOG00000002125	RPUSD3	98	71.884	ENSMAUG00000015473	Rpusd3	100	71.884	Mesocricetus_auratus
ENSSTOG00000002125	RPUSD3	98	75.291	ENSMICG00000002315	RPUSD3	100	75.291	Microcebus_murinus
ENSSTOG00000002125	RPUSD3	98	69.767	ENSMOCG00000022613	Rpusd3	100	69.767	Microtus_ochrogaster
ENSSTOG00000002125	RPUSD3	95	56.342	ENSMODG00000005210	RPUSD3	88	56.342	Monodelphis_domestica
ENSSTOG00000002125	RPUSD3	98	70.930	MGP_CAROLIEiJ_G0028725	Rpusd3	100	70.930	Mus_caroli
ENSSTOG00000002125	RPUSD3	98	70.930	ENSMUSG00000051169	Rpusd3	100	70.930	Mus_musculus
ENSSTOG00000002125	RPUSD3	98	71.884	MGP_PahariEiJ_G0022476	Rpusd3	100	71.884	Mus_pahari
ENSSTOG00000002125	RPUSD3	98	70.640	MGP_SPRETEiJ_G0029753	Rpusd3	100	70.640	Mus_spretus
ENSSTOG00000002125	RPUSD3	100	73.295	ENSMPUG00000017132	RPUSD3	100	73.295	Mustela_putorius_furo
ENSSTOG00000002125	RPUSD3	98	77.168	ENSMLUG00000006135	RPUSD3	99	77.168	Myotis_lucifugus
ENSSTOG00000002125	RPUSD3	97	73.021	ENSNGAG00000023704	Rpusd3	99	73.021	Nannospalax_galili
ENSSTOG00000002125	RPUSD3	99	65.903	ENSNLEG00000004214	RPUSD3	95	82.673	Nomascus_leucogenys
ENSSTOG00000002125	RPUSD3	74	63.602	ENSMEUG00000013098	-	100	63.359	Notamacropus_eugenii
ENSSTOG00000002125	RPUSD3	94	60.241	ENSOPRG00000002300	RPUSD3	95	60.241	Ochotona_princeps
ENSSTOG00000002125	RPUSD3	75	78.409	ENSODEG00000018137	RPUSD3	91	78.409	Octodon_degus
ENSSTOG00000002125	RPUSD3	81	50.352	ENSOANG00000012081	-	99	50.352	Ornithorhynchus_anatinus
ENSSTOG00000002125	RPUSD3	98	64.286	ENSOCUG00000027885	RPUSD3	100	64.286	Oryctolagus_cuniculus
ENSSTOG00000002125	RPUSD3	89	79.936	ENSOGAG00000012592	RPUSD3	100	79.936	Otolemur_garnettii
ENSSTOG00000002125	RPUSD3	99	75.783	ENSOARG00000005928	RPUSD3	99	75.783	Ovis_aries
ENSSTOG00000002125	RPUSD3	100	77.557	ENSPPAG00000038083	RPUSD3	100	77.557	Pan_paniscus
ENSSTOG00000002125	RPUSD3	100	76.136	ENSPPRG00000024433	RPUSD3	100	76.136	Panthera_pardus
ENSSTOG00000002125	RPUSD3	98	77.326	ENSPTIG00000006828	RPUSD3	100	77.326	Panthera_tigris_altaica
ENSSTOG00000002125	RPUSD3	100	77.273	ENSPTRG00000051760	RPUSD3	100	77.273	Pan_troglodytes
ENSSTOG00000002125	RPUSD3	99	78.797	ENSPANG00000023885	RPUSD3	100	78.409	Papio_anubis
ENSSTOG00000002125	RPUSD3	98	70.349	ENSPEMG00000017245	Rpusd3	100	70.349	Peromyscus_maniculatus_bairdii
ENSSTOG00000002125	RPUSD3	96	56.973	ENSPCIG00000021901	RPUSD3	96	56.973	Phascolarctos_cinereus
ENSSTOG00000002125	RPUSD3	100	77.557	ENSPPYG00000013676	RPUSD3	100	77.557	Pongo_abelii
ENSSTOG00000002125	RPUSD3	82	56.747	ENSPCAG00000013731	-	100	56.747	Procavia_capensis
ENSSTOG00000002125	RPUSD3	100	78.409	ENSPCOG00000018314	RPUSD3	100	78.409	Propithecus_coquereli
ENSSTOG00000002125	RPUSD3	100	75.852	ENSPVAG00000011107	RPUSD3	100	75.852	Pteropus_vampyrus
ENSSTOG00000002125	RPUSD3	98	67.246	ENSRNOG00000009084	Rpusd3	100	67.246	Rattus_norvegicus
ENSSTOG00000002125	RPUSD3	99	78.223	ENSRBIG00000041230	RPUSD3	95	83.168	Rhinopithecus_bieti
ENSSTOG00000002125	RPUSD3	99	78.223	ENSRROG00000043328	RPUSD3	95	83.168	Rhinopithecus_roxellana
ENSSTOG00000002125	RPUSD3	99	76.068	ENSSBOG00000036106	RPUSD3	99	76.068	Saimiri_boliviensis_boliviensis
ENSSTOG00000002125	RPUSD3	88	55.519	ENSSHAG00000015536	RPUSD3	99	55.519	Sarcophilus_harrisii
ENSSTOG00000002125	RPUSD3	99	74.212	ENSSSCG00000011555	RPUSD3	99	74.212	Sus_scrofa
ENSSTOG00000002125	RPUSD3	66	49.785	ENSTGUG00000008744	RPUSD3	93	49.309	Taeniopygia_guttata
ENSSTOG00000002125	RPUSD3	82	74.048	ENSTBEG00000000176	RPUSD3	100	74.048	Tupaia_belangeri
ENSSTOG00000002125	RPUSD3	100	75.284	ENSTTRG00000007544	RPUSD3	100	75.284	Tursiops_truncatus
ENSSTOG00000002125	RPUSD3	89	80.255	ENSUAMG00000011354	RPUSD3	98	80.255	Ursus_americanus
ENSSTOG00000002125	RPUSD3	100	76.136	ENSUMAG00000018830	RPUSD3	100	76.136	Ursus_maritimus
ENSSTOG00000002125	RPUSD3	98	76.163	ENSVVUG00000023735	RPUSD3	100	76.163	Vulpes_vulpes
ENSSTOG00000002125	RPUSD3	79	50.534	ENSXETG00000023546	rpusd3	99	50.534	Xenopus_tropicalis