EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000002695 (Gene tree)
Gene ID: 101968430
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 35851 bases
Position: chrJH393334.1:6429185-6465035
Accession: 101968430
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000028247	MIF4G_like	PF09088.11	2.4e-36	1	1
ENSSTOP00000029502	MIF4G_like	PF09088.11	4.1e-11	1	1
ENSSTOP00000002421	MIF4G_like	PF09088.11	4.1e-11	1	1
ENSSTOP00000028247	MIF4G_like_2	PF09090.11	6.3e-86	1	1
ENSSTOP00000029502	MIF4G_like_2	PF09090.11	7.6e-86	1	1
ENSSTOP00000002421	MIF4G_like_2	PF09090.11	7.8e-86	1	1
ENSSTOP00000029502	MIF4G	PF02854.19	1.5e-31	1	1
ENSSTOP00000002421	MIF4G	PF02854.19	1.5e-31	1	1
ENSSTOP00000028247	MIF4G	PF02854.19	7.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000043218	NCBP1-201	3656	XM_005326307	ENSSTOP00000028247	790 (aa)	XP_005326364	A0A287D3Z9
ENSSTOT00000033894	NCBP1-203	2265	-	ENSSTOP00000029502	754 (aa)	-	A0A287D7F1
ENSSTOT00000002705	NCBP1-202	2268	-	ENSSTOP00000002421	755 (aa)	-	I3M0Y3

Gene Model

Click here to download ENSSTOG00000002695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002695's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002695	NCBP1	100	99.367	ENSG00000136937	NCBP1	100	99.367	Homo_sapiens
ENSSTOG00000002695	NCBP1	99	83.753	ENSAPOG00000008002	NCBP1	99	83.375	Acanthochromis_polyacanthus
ENSSTOG00000002695	NCBP1	100	99.116	ENSAMEG00000004763	NCBP1	100	99.116	Ailuropoda_melanoleuca
ENSSTOG00000002695	NCBP1	99	84.111	ENSACIG00000000274	NCBP1	99	83.480	Amphilophus_citrinellus
ENSSTOG00000002695	NCBP1	99	83.879	ENSAOCG00000021148	NCBP1	99	83.501	Amphiprion_ocellaris
ENSSTOG00000002695	NCBP1	99	83.879	ENSAPEG00000001701	NCBP1	99	83.501	Amphiprion_percula
ENSSTOG00000002695	NCBP1	99	82.997	ENSATEG00000006929	NCBP1	99	82.620	Anabas_testudineus
ENSSTOG00000002695	NCBP1	95	90.621	ENSAPLG00000016318	NCBP1	100	90.753	Anas_platyrhynchos
ENSSTOG00000002695	NCBP1	100	87.266	ENSACAG00000004409	NCBP1	87	87.141	Anolis_carolinensis
ENSSTOG00000002695	NCBP1	100	96.456	ENSANAG00000025744	NCBP1	99	99.441	Aotus_nancymaae
ENSSTOG00000002695	NCBP1	99	83.249	ENSACLG00000014812	NCBP1	99	83.101	Astatotilapia_calliptera
ENSSTOG00000002695	NCBP1	99	81.910	ENSAMXG00000016364	NCBP1	99	81.407	Astyanax_mexicanus
ENSSTOG00000002695	NCBP1	100	98.987	ENSBTAG00000009732	NCBP1	100	98.987	Bos_taurus
ENSSTOG00000002695	NCBP1	99	34.772	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSSTOG00000002695	NCBP1	100	99.620	ENSCJAG00000010840	NCBP1	100	100.000	Callithrix_jacchus
ENSSTOG00000002695	NCBP1	100	99.494	ENSCAFG00000002445	NCBP1	100	99.494	Canis_familiaris
ENSSTOG00000002695	NCBP1	99	98.606	ENSCAFG00020017997	NCBP1	100	99.414	Canis_lupus_dingo
ENSSTOG00000002695	NCBP1	100	98.734	ENSCHIG00000020139	NCBP1	100	98.734	Capra_hircus
ENSSTOG00000002695	NCBP1	52	97.330	ENSTSYG00000011914	NCBP1	98	99.687	Carlito_syrichta
ENSSTOG00000002695	NCBP1	81	89.062	ENSCAPG00000014252	NCBP1	90	88.979	Cavia_aperea
ENSSTOG00000002695	NCBP1	97	97.392	ENSCPOG00000012573	NCBP1	99	97.392	Cavia_porcellus
ENSSTOG00000002695	NCBP1	100	99.494	ENSCCAG00000032297	NCBP1	100	99.494	Cebus_capucinus
ENSSTOG00000002695	NCBP1	100	99.367	ENSCATG00000010052	NCBP1	100	99.367	Cercocebus_atys
ENSSTOG00000002695	NCBP1	100	99.367	ENSCLAG00000014339	NCBP1	100	99.367	Chinchilla_lanigera
ENSSTOG00000002695	NCBP1	100	99.367	ENSCSAG00000010929	NCBP1	100	99.367	Chlorocebus_sabaeus
ENSSTOG00000002695	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSSTOG00000002695	NCBP1	100	86.415	ENSCPBG00000024344	NCBP1	99	90.972	Chrysemys_picta_bellii
ENSSTOG00000002695	NCBP1	99	54.235	ENSCING00000008990	-	99	54.109	Ciona_intestinalis
ENSSTOG00000002695	NCBP1	99	53.199	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSSTOG00000002695	NCBP1	100	99.367	ENSCANG00000036913	NCBP1	100	99.367	Colobus_angolensis_palliatus
ENSSTOG00000002695	NCBP1	100	98.481	ENSCGRG00001015771	Ncbp1	100	98.481	Cricetulus_griseus_chok1gshd
ENSSTOG00000002695	NCBP1	99	98.590	ENSCGRG00000010311	Ncbp1	100	98.590	Cricetulus_griseus_crigri
ENSSTOG00000002695	NCBP1	99	82.872	ENSCSEG00000012377	NCBP1	99	83.217	Cynoglossus_semilaevis
ENSSTOG00000002695	NCBP1	99	81.006	ENSCVAG00000008795	NCBP1	99	81.635	Cyprinodon_variegatus
ENSSTOG00000002695	NCBP1	100	98.228	ENSDNOG00000006885	NCBP1	100	98.228	Dasypus_novemcinctus
ENSSTOG00000002695	NCBP1	100	94.207	ENSDORG00000013652	Ncbp1	100	94.207	Dipodomys_ordii
ENSSTOG00000002695	NCBP1	100	57.391	FBgn0022942	Cbp80	100	57.875	Drosophila_melanogaster
ENSSTOG00000002695	NCBP1	84	33.578	FBgn0038887	CG7907	87	33.578	Drosophila_melanogaster
ENSSTOG00000002695	NCBP1	89	94.105	ENSETEG00000009705	NCBP1	89	94.105	Echinops_telfairi
ENSSTOG00000002695	NCBP1	100	73.711	ENSEBUG00000008386	NCBP1	100	73.459	Eptatretus_burgeri
ENSSTOG00000002695	NCBP1	100	98.987	ENSEASG00005022795	NCBP1	100	98.987	Equus_asinus_asinus
ENSSTOG00000002695	NCBP1	100	99.114	ENSECAG00000013847	NCBP1	100	99.114	Equus_caballus
ENSSTOG00000002695	NCBP1	95	93.891	ENSEEUG00000015973	NCBP1	99	93.493	Erinaceus_europaeus
ENSSTOG00000002695	NCBP1	99	80.755	ENSELUG00000022519	NCBP1	99	81.509	Esox_lucius
ENSSTOG00000002695	NCBP1	100	99.367	ENSFCAG00000001206	NCBP1	100	99.367	Felis_catus
ENSSTOG00000002695	NCBP1	98	89.440	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSSTOG00000002695	NCBP1	100	99.114	ENSFDAG00000010864	NCBP1	100	99.114	Fukomys_damarensis
ENSSTOG00000002695	NCBP1	99	82.516	ENSFHEG00000000655	NCBP1	99	82.013	Fundulus_heteroclitus
ENSSTOG00000002695	NCBP1	99	79.623	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSSTOG00000002695	NCBP1	98	90.629	ENSGALG00000002087	NCBP1	100	90.290	Gallus_gallus
ENSSTOG00000002695	NCBP1	99	83.016	ENSGAFG00000017787	NCBP1	99	82.890	Gambusia_affinis
ENSSTOG00000002695	NCBP1	99	82.058	ENSGACG00000016772	NCBP1	98	81.681	Gasterosteus_aculeatus
ENSSTOG00000002695	NCBP1	100	89.057	ENSGAGG00000019483	NCBP1	99	90.694	Gopherus_agassizii
ENSSTOG00000002695	NCBP1	100	99.367	ENSGGOG00000001376	NCBP1	100	99.367	Gorilla_gorilla
ENSSTOG00000002695	NCBP1	99	83.249	ENSHBUG00000020843	NCBP1	99	82.872	Haplochromis_burtoni
ENSSTOG00000002695	NCBP1	100	86.616	ENSHGLG00000018112	-	100	86.616	Heterocephalus_glaber_female
ENSSTOG00000002695	NCBP1	100	99.241	ENSHGLG00000001882	NCBP1	100	99.241	Heterocephalus_glaber_female
ENSSTOG00000002695	NCBP1	100	99.241	ENSHGLG00100013014	NCBP1	100	99.241	Heterocephalus_glaber_male
ENSSTOG00000002695	NCBP1	100	86.364	ENSHGLG00100017373	-	100	86.364	Heterocephalus_glaber_male
ENSSTOG00000002695	NCBP1	79	72.381	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSSTOG00000002695	NCBP1	99	82.390	ENSIPUG00000007275	ncbp1	99	82.013	Ictalurus_punctatus
ENSSTOG00000002695	NCBP1	99	82.368	ENSKMAG00000003594	NCBP1	99	86.382	Kryptolebias_marmoratus
ENSSTOG00000002695	NCBP1	99	81.242	ENSLBEG00000011661	NCBP1	99	80.745	Labrus_bergylta
ENSSTOG00000002695	NCBP1	100	80.348	ENSLACG00000013955	NCBP1	100	79.851	Latimeria_chalumnae
ENSSTOG00000002695	NCBP1	99	72.569	ENSLOCG00000009579	NCBP1	99	72.569	Lepisosteus_oculatus
ENSSTOG00000002695	NCBP1	100	98.734	ENSLAFG00000005999	NCBP1	100	98.734	Loxodonta_africana
ENSSTOG00000002695	NCBP1	100	99.367	ENSMFAG00000030994	NCBP1	100	99.367	Macaca_fascicularis
ENSSTOG00000002695	NCBP1	99	99.358	ENSMMUG00000012281	NCBP1	99	99.358	Macaca_mulatta
ENSSTOG00000002695	NCBP1	100	99.367	ENSMNEG00000042790	NCBP1	100	99.367	Macaca_nemestrina
ENSSTOG00000002695	NCBP1	100	99.367	ENSMLEG00000030374	NCBP1	100	99.367	Mandrillus_leucophaeus
ENSSTOG00000002695	NCBP1	99	83.501	ENSMAMG00000014806	NCBP1	99	82.997	Mastacembelus_armatus
ENSSTOG00000002695	NCBP1	99	83.249	ENSMZEG00005003469	NCBP1	99	82.872	Maylandia_zebra
ENSSTOG00000002695	NCBP1	97	82.943	ENSMZEG00005009290	-	99	82.812	Maylandia_zebra
ENSSTOG00000002695	NCBP1	99	97.837	ENSMAUG00000020583	Ncbp1	99	97.837	Mesocricetus_auratus
ENSSTOG00000002695	NCBP1	100	98.987	ENSMICG00000012682	NCBP1	100	98.987	Microcebus_murinus
ENSSTOG00000002695	NCBP1	100	98.101	ENSMOCG00000015818	Ncbp1	100	98.101	Microtus_ochrogaster
ENSSTOG00000002695	NCBP1	91	82.378	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
ENSSTOG00000002695	NCBP1	100	94.051	ENSMODG00000003202	NCBP1	99	93.797	Monodelphis_domestica
ENSSTOG00000002695	NCBP1	99	82.620	ENSMALG00000003547	NCBP1	99	82.116	Monopterus_albus
ENSSTOG00000002695	NCBP1	100	98.101	MGP_CAROLIEiJ_G0025982	Ncbp1	100	98.101	Mus_caroli
ENSSTOG00000002695	NCBP1	100	98.101	ENSMUSG00000028330	Ncbp1	100	98.101	Mus_musculus
ENSSTOG00000002695	NCBP1	100	98.354	MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	Mus_pahari
ENSSTOG00000002695	NCBP1	100	98.101	MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	Mus_spretus
ENSSTOG00000002695	NCBP1	100	99.367	ENSMPUG00000006399	NCBP1	100	99.367	Mustela_putorius_furo
ENSSTOG00000002695	NCBP1	99	97.946	ENSMLUG00000015201	NCBP1	100	97.946	Myotis_lucifugus
ENSSTOG00000002695	NCBP1	100	98.101	ENSNGAG00000014101	Ncbp1	100	98.101	Nannospalax_galili
ENSSTOG00000002695	NCBP1	76	86.784	ENSNBRG00000014674	NCBP1	97	86.784	Neolamprologus_brichardi
ENSSTOG00000002695	NCBP1	100	99.367	ENSNLEG00000016909	NCBP1	100	99.367	Nomascus_leucogenys
ENSSTOG00000002695	NCBP1	89	95.495	ENSMEUG00000010672	NCBP1	90	93.243	Notamacropus_eugenii
ENSSTOG00000002695	NCBP1	79	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSSTOG00000002695	NCBP1	100	99.114	ENSODEG00000003232	NCBP1	100	99.114	Octodon_degus
ENSSTOG00000002695	NCBP1	99	83.249	ENSONIG00000001502	NCBP1	99	82.872	Oreochromis_niloticus
ENSSTOG00000002695	NCBP1	79	95.666	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSSTOG00000002695	NCBP1	98	98.715	ENSOCUG00000013853	NCBP1	97	98.715	Oryctolagus_cuniculus
ENSSTOG00000002695	NCBP1	99	81.328	ENSORLG00000011008	NCBP1	99	80.952	Oryzias_latipes
ENSSTOG00000002695	NCBP1	99	81.328	ENSORLG00020017455	NCBP1	99	80.952	Oryzias_latipes_hni
ENSSTOG00000002695	NCBP1	99	81.454	ENSORLG00015012127	NCBP1	99	81.078	Oryzias_latipes_hsok
ENSSTOG00000002695	NCBP1	99	81.955	ENSOMEG00000020698	NCBP1	99	81.830	Oryzias_melastigma
ENSSTOG00000002695	NCBP1	100	99.369	ENSOGAG00000013888	NCBP1	100	99.369	Otolemur_garnettii
ENSSTOG00000002695	NCBP1	100	98.734	ENSOARG00000011233	NCBP1	100	98.734	Ovis_aries
ENSSTOG00000002695	NCBP1	100	99.367	ENSPPAG00000026462	NCBP1	100	99.367	Pan_paniscus
ENSSTOG00000002695	NCBP1	100	99.494	ENSPPRG00000022574	NCBP1	100	99.494	Panthera_pardus
ENSSTOG00000002695	NCBP1	100	99.494	ENSPTIG00000018507	NCBP1	100	99.494	Panthera_tigris_altaica
ENSSTOG00000002695	NCBP1	100	99.367	ENSPTRG00000021167	NCBP1	100	99.367	Pan_troglodytes
ENSSTOG00000002695	NCBP1	100	99.367	ENSPANG00000025591	NCBP1	100	99.367	Papio_anubis
ENSSTOG00000002695	NCBP1	100	81.006	ENSPKIG00000015861	NCBP1	100	80.881	Paramormyrops_kingsleyae
ENSSTOG00000002695	NCBP1	64	89.844	ENSPSIG00000009558	NCBP1	100	90.039	Pelodiscus_sinensis
ENSSTOG00000002695	NCBP1	99	79.597	ENSPMGG00000020476	NCBP1	99	79.093	Periophthalmus_magnuspinnatus
ENSSTOG00000002695	NCBP1	100	97.975	ENSPEMG00000020105	Ncbp1	100	97.975	Peromyscus_maniculatus_bairdii
ENSSTOG00000002695	NCBP1	100	67.746	ENSPMAG00000005533	NCBP1	100	67.746	Petromyzon_marinus
ENSSTOG00000002695	NCBP1	100	93.797	ENSPCIG00000015800	NCBP1	99	95.122	Phascolarctos_cinereus
ENSSTOG00000002695	NCBP1	99	82.206	ENSPFOG00000004158	NCBP1	99	81.830	Poecilia_formosa
ENSSTOG00000002695	NCBP1	99	82.642	ENSPLAG00000020002	NCBP1	99	82.264	Poecilia_latipinna
ENSSTOG00000002695	NCBP1	99	82.642	ENSPMEG00000019821	NCBP1	99	82.264	Poecilia_mexicana
ENSSTOG00000002695	NCBP1	99	82.538	ENSPREG00000006035	NCBP1	99	82.161	Poecilia_reticulata
ENSSTOG00000002695	NCBP1	100	99.367	ENSPPYG00000019426	NCBP1	100	99.367	Pongo_abelii
ENSSTOG00000002695	NCBP1	87	98.966	ENSPCAG00000009943	NCBP1	83	98.966	Procavia_capensis
ENSSTOG00000002695	NCBP1	82	99.342	ENSPCOG00000020024	NCBP1	98	99.342	Propithecus_coquereli
ENSSTOG00000002695	NCBP1	100	98.987	ENSPVAG00000005924	NCBP1	100	98.987	Pteropus_vampyrus
ENSSTOG00000002695	NCBP1	91	83.240	ENSPNYG00000002140	NCBP1	99	83.101	Pundamilia_nyererei
ENSSTOG00000002695	NCBP1	99	82.412	ENSPNAG00000027753	NCBP1	99	82.035	Pygocentrus_nattereri
ENSSTOG00000002695	NCBP1	100	98.228	ENSRNOG00000023605	Ncbp1	100	98.228	Rattus_norvegicus
ENSSTOG00000002695	NCBP1	100	99.367	ENSRBIG00000043175	NCBP1	100	99.367	Rhinopithecus_bieti
ENSSTOG00000002695	NCBP1	100	99.367	ENSRROG00000029767	NCBP1	100	99.367	Rhinopithecus_roxellana
ENSSTOG00000002695	NCBP1	100	99.494	ENSSBOG00000019378	NCBP1	100	99.494	Saimiri_boliviensis_boliviensis
ENSSTOG00000002695	NCBP1	72	96.109	ENSSHAG00000015882	NCBP1	73	96.109	Sarcophilus_harrisii
ENSSTOG00000002695	NCBP1	99	81.258	ENSSFOG00015001872	NCBP1	100	80.506	Scleropages_formosus
ENSSTOG00000002695	NCBP1	99	81.864	ENSSMAG00000007463	NCBP1	99	81.612	Scophthalmus_maximus
ENSSTOG00000002695	NCBP1	99	83.397	ENSSDUG00000007019	NCBP1	100	82.990	Seriola_dumerili
ENSSTOG00000002695	NCBP1	99	83.123	ENSSLDG00000021924	NCBP1	99	82.746	Seriola_lalandi_dorsalis
ENSSTOG00000002695	NCBP1	85	90.393	ENSSARG00000007274	NCBP1	87	90.393	Sorex_araneus
ENSSTOG00000002695	NCBP1	100	82.152	ENSSPUG00000008609	NCBP1	100	82.152	Sphenodon_punctatus
ENSSTOG00000002695	NCBP1	99	83.627	ENSSPAG00000012550	NCBP1	99	83.249	Stegastes_partitus
ENSSTOG00000002695	NCBP1	100	99.241	ENSSSCG00000005366	NCBP1	100	99.241	Sus_scrofa
ENSSTOG00000002695	NCBP1	100	84.025	ENSTGUG00000001472	NCBP1	100	84.151	Taeniopygia_guttata
ENSSTOG00000002695	NCBP1	99	81.864	ENSTRUG00000005287	NCBP1	99	81.486	Takifugu_rubripes
ENSSTOG00000002695	NCBP1	100	95.696	ENSTBEG00000004035	NCBP1	100	95.696	Tupaia_belangeri
ENSSTOG00000002695	NCBP1	88	99.507	ENSTTRG00000000507	NCBP1	88	99.507	Tursiops_truncatus
ENSSTOG00000002695	NCBP1	100	99.367	ENSUAMG00000005471	NCBP1	100	99.367	Ursus_americanus
ENSSTOG00000002695	NCBP1	97	97.009	ENSUMAG00000011865	NCBP1	100	99.414	Ursus_maritimus
ENSSTOG00000002695	NCBP1	100	95.063	ENSVPAG00000010537	NCBP1	100	95.063	Vicugna_pacos
ENSSTOG00000002695	NCBP1	100	99.494	ENSVVUG00000019725	NCBP1	100	99.494	Vulpes_vulpes
ENSSTOG00000002695	NCBP1	100	81.290	ENSXETG00000010179	ncbp1	100	81.290	Xenopus_tropicalis
ENSSTOG00000002695	NCBP1	99	82.767	ENSXMAG00000018253	NCBP1	99	82.390	Xiphophorus_maculatus