EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000002778 (Gene tree)
Gene ID: 101961652
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 55777 bases
Position: chrJH393433.1:991193-1046969
Accession: 101961652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000029779	ResIII	PF04851.15	5.9e-08	1	1
ENSSTOP00000002521	ResIII	PF04851.15	1.2e-07	1	1
ENSSTOP00000032373	ResIII	PF04851.15	1.2e-07	1	1
ENSSTOP00000029920	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000039872	CHD5-204	5859	-	ENSSTOP00000029779	1952 (aa)	-	A0A287D8C3
ENSSTOT00000033477	CHD5-201	6770	XM_005334779	ENSSTOP00000029920	2030 (aa)	XP_005334836	A0A287D8N5
ENSSTOT00000035713	CHD5-202	5772	-	ENSSTOP00000032373	1924 (aa)	-	A0A287DFP2
ENSSTOT00000002818	CHD5-203	5673	-	ENSSTOP00000002521	1890 (aa)	-	I3M162

Gene Model

Click here to download ENSSTOG00000002778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000002778	CHD5	94	73.001	ENSSTOG00000007601	-	95	72.565
ENSSTOG00000002778	CHD5	98	70.746	ENSSTOG00000025907	CHD3	96	68.163

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002778	CHD5	100	94.759	ENSG00000116254	CHD5	99	96.577	Homo_sapiens
ENSSTOG00000002778	CHD5	98	95.498	ENSAMEG00000009880	CHD5	99	95.537	Ailuropoda_melanoleuca
ENSSTOG00000002778	CHD5	95	78.793	ENSACIG00000012582	chd5	98	78.650	Amphilophus_citrinellus
ENSSTOG00000002778	CHD5	95	80.219	ENSAOCG00000020356	chd5	93	79.065	Amphiprion_ocellaris
ENSSTOG00000002778	CHD5	96	82.419	ENSAPLG00000015475	CHD5	98	82.616	Anas_platyrhynchos
ENSSTOG00000002778	CHD5	96	84.412	ENSACAG00000002441	CHD5	99	82.377	Anolis_carolinensis
ENSSTOG00000002778	CHD5	88	96.688	ENSANAG00000001078	CHD5	91	96.688	Aotus_nancymaae
ENSSTOG00000002778	CHD5	95	76.073	ENSACLG00000003012	chd5	96	75.275	Astatotilapia_calliptera
ENSSTOG00000002778	CHD5	88	82.336	ENSAMXG00000008921	chd5	98	82.456	Astyanax_mexicanus
ENSSTOG00000002778	CHD5	94	96.472	ENSBTAG00000040477	CHD5	100	96.865	Bos_taurus
ENSSTOG00000002778	CHD5	100	94.603	ENSCJAG00000000101	CHD5	99	96.421	Callithrix_jacchus
ENSSTOG00000002778	CHD5	93	95.950	ENSCAFG00000019545	CHD5	100	96.808	Canis_familiaris
ENSSTOG00000002778	CHD5	99	96.398	ENSCAFG00020008689	CHD5	96	96.417	Canis_lupus_dingo
ENSSTOG00000002778	CHD5	98	95.072	ENSCHIG00000015027	CHD5	98	93.406	Capra_hircus
ENSSTOG00000002778	CHD5	98	90.904	ENSTSYG00000033991	CHD5	99	90.848	Carlito_syrichta
ENSSTOG00000002778	CHD5	100	96.032	ENSCAPG00000009294	CHD5	100	96.032	Cavia_aperea
ENSSTOG00000002778	CHD5	100	96.032	ENSCPOG00000025080	CHD5	100	96.032	Cavia_porcellus
ENSSTOG00000002778	CHD5	100	94.603	ENSCCAG00000024756	CHD5	99	96.421	Cebus_capucinus
ENSSTOG00000002778	CHD5	98	95.707	ENSCATG00000043011	CHD5	99	95.747	Cercocebus_atys
ENSSTOG00000002778	CHD5	100	96.825	ENSCLAG00000010589	CHD5	100	96.825	Chinchilla_lanigera
ENSSTOG00000002778	CHD5	100	95.018	ENSCSAG00000000733	CHD5	99	96.784	Chlorocebus_sabaeus
ENSSTOG00000002778	CHD5	94	89.413	ENSCPBG00000019363	CHD5	100	90.784	Chrysemys_picta_bellii
ENSSTOG00000002778	CHD5	100	94.966	ENSCANG00000032302	CHD5	99	96.241	Colobus_angolensis_palliatus
ENSSTOG00000002778	CHD5	56	97.642	ENSCGRG00001011042	Chd5	100	97.642	Cricetulus_griseus_chok1gshd
ENSSTOG00000002778	CHD5	100	95.820	ENSCGRG00000011341	Chd5	100	95.132	Cricetulus_griseus_crigri
ENSSTOG00000002778	CHD5	98	78.507	ENSDARG00000105083	chd5	97	80.702	Danio_rerio
ENSSTOG00000002778	CHD5	95	67.823	ENSDARG00000025789	chd4b	96	67.423	Danio_rerio
ENSSTOG00000002778	CHD5	100	89.984	ENSDNOG00000046342	CHD5	99	91.092	Dasypus_novemcinctus
ENSSTOG00000002778	CHD5	100	96.353	ENSDORG00000005923	Chd5	100	96.371	Dipodomys_ordii
ENSSTOG00000002778	CHD5	99	94.080	ENSEASG00005021464	CHD5	97	95.528	Equus_asinus_asinus
ENSSTOG00000002778	CHD5	99	93.658	ENSECAG00000025043	CHD5	98	97.581	Equus_caballus
ENSSTOG00000002778	CHD5	78	99.535	ENSEEUG00000002772	CHD5	77	99.535	Erinaceus_europaeus
ENSSTOG00000002778	CHD5	95	77.323	ENSELUG00000010742	chd5	88	91.584	Esox_lucius
ENSSTOG00000002778	CHD5	98	95.972	ENSFCAG00000006319	CHD5	99	95.758	Felis_catus
ENSSTOG00000002778	CHD5	98	88.860	ENSFALG00000009740	CHD5	99	88.275	Ficedula_albicollis
ENSSTOG00000002778	CHD5	99	95.581	ENSFDAG00000012881	CHD5	97	94.502	Fukomys_damarensis
ENSSTOG00000002778	CHD5	100	87.222	ENSGALG00000000747	CHD5	99	87.687	Gallus_gallus
ENSSTOG00000002778	CHD5	57	82.721	ENSGACG00000004389	chd5	93	82.812	Gasterosteus_aculeatus
ENSSTOG00000002778	CHD5	90	96.517	ENSGAGG00000001590	CHD5	99	95.610	Gopherus_agassizii
ENSSTOG00000002778	CHD5	100	94.759	ENSGGOG00000000708	CHD5	100	96.575	Gorilla_gorilla
ENSSTOG00000002778	CHD5	95	76.877	ENSHBUG00000013453	chd5	96	76.083	Haplochromis_burtoni
ENSSTOG00000002778	CHD5	99	95.972	ENSHGLG00000018184	CHD5	99	96.017	Heterocephalus_glaber_female
ENSSTOG00000002778	CHD5	100	87.694	ENSHGLG00100013261	CHD5	98	88.428	Heterocephalus_glaber_male
ENSSTOG00000002778	CHD5	95	78.997	ENSIPUG00000005446	chd5	98	79.232	Ictalurus_punctatus
ENSSTOG00000002778	CHD5	99	95.760	ENSJJAG00000019072	Chd5	99	94.444	Jaculus_jaculus
ENSSTOG00000002778	CHD5	98	83.074	ENSLOCG00000004944	chd5	94	82.903	Lepisosteus_oculatus
ENSSTOG00000002778	CHD5	98	96.555	ENSLAFG00000006348	CHD5	99	96.625	Loxodonta_africana
ENSSTOG00000002778	CHD5	100	95.018	ENSMFAG00000033993	CHD5	100	96.973	Macaca_fascicularis
ENSSTOG00000002778	CHD5	100	96.570	ENSMMUG00000016838	CHD5	99	96.784	Macaca_mulatta
ENSSTOG00000002778	CHD5	100	95.018	ENSMNEG00000040044	CHD5	99	96.836	Macaca_nemestrina
ENSSTOG00000002778	CHD5	100	91.500	ENSMLEG00000039166	CHD5	100	93.292	Mandrillus_leucophaeus
ENSSTOG00000002778	CHD5	90	81.926	ENSMZEG00005000841	chd5	91	81.786	Maylandia_zebra
ENSSTOG00000002778	CHD5	98	87.981	ENSMGAG00000001055	CHD5	99	87.901	Meleagris_gallopavo
ENSSTOG00000002778	CHD5	95	97.358	ENSMICG00000017862	CHD5	96	97.297	Microcebus_murinus
ENSSTOG00000002778	CHD5	99	95.659	ENSMOCG00000011049	Chd5	99	94.339	Microtus_ochrogaster
ENSSTOG00000002778	CHD5	87	80.964	ENSMODG00000006294	CHD5	78	94.573	Monodelphis_domestica
ENSSTOG00000002778	CHD5	95	78.867	ENSMALG00000002831	chd5	99	77.345	Monopterus_albus
ENSSTOG00000002778	CHD5	100	94.139	MGP_CAROLIEiJ_G0026857	Chd5	99	94.387	Mus_caroli
ENSSTOG00000002778	CHD5	99	95.135	ENSMUSG00000005045	Chd5	99	94.453	Mus_musculus
ENSSTOG00000002778	CHD5	99	95.445	MGP_PahariEiJ_G0029205	Chd5	99	94.868	Mus_pahari
ENSSTOG00000002778	CHD5	99	95.498	MGP_SPRETEiJ_G0027850	Chd5	99	94.921	Mus_spretus
ENSSTOG00000002778	CHD5	100	90.840	ENSMPUG00000007122	CHD5	99	92.606	Mustela_putorius_furo
ENSSTOG00000002778	CHD5	99	94.545	ENSNGAG00000019812	Chd5	96	94.912	Nannospalax_galili
ENSSTOG00000002778	CHD5	100	92.527	ENSNLEG00000010320	CHD5	100	94.136	Nomascus_leucogenys
ENSSTOG00000002778	CHD5	87	91.255	ENSOPRG00000004304	CHD5	86	92.032	Ochotona_princeps
ENSSTOG00000002778	CHD5	100	96.296	ENSODEG00000010262	CHD5	100	95.714	Octodon_degus
ENSSTOG00000002778	CHD5	95	78.211	ENSONIG00000000619	chd5	93	78.353	Oreochromis_niloticus
ENSSTOG00000002778	CHD5	97	73.393	ENSOANG00000001819	CHD5	98	73.059	Ornithorhynchus_anatinus
ENSSTOG00000002778	CHD5	98	94.386	ENSOGAG00000005703	CHD5	99	94.499	Otolemur_garnettii
ENSSTOG00000002778	CHD5	100	95.171	ENSOARG00000013425	CHD5	99	95.171	Ovis_aries
ENSSTOG00000002778	CHD5	100	94.761	ENSPPAG00000034048	CHD5	100	96.577	Pan_paniscus
ENSSTOG00000002778	CHD5	98	95.433	ENSPPRG00000009453	CHD5	99	95.137	Panthera_pardus
ENSSTOG00000002778	CHD5	100	86.568	ENSPTIG00000013926	CHD5	99	88.355	Panthera_tigris_altaica
ENSSTOG00000002778	CHD5	100	94.761	ENSPTRG00000000075	CHD5	99	96.579	Pan_troglodytes
ENSSTOG00000002778	CHD5	100	95.018	ENSPANG00000006765	CHD5	99	96.836	Papio_anubis
ENSSTOG00000002778	CHD5	96	78.375	ENSPKIG00000004282	chd5	95	83.665	Paramormyrops_kingsleyae
ENSSTOG00000002778	CHD5	97	81.663	ENSPSIG00000006414	CHD5	100	82.833	Pelodiscus_sinensis
ENSSTOG00000002778	CHD5	69	97.220	ENSPEMG00000014799	Chd5	100	97.220	Peromyscus_maniculatus_bairdii
ENSSTOG00000002778	CHD5	99	92.536	ENSPCIG00000028310	CHD5	98	91.628	Phascolarctos_cinereus
ENSSTOG00000002778	CHD5	95	77.481	ENSPLAG00000005343	chd5	99	75.663	Poecilia_latipinna
ENSSTOG00000002778	CHD5	99	94.462	ENSPPYG00000001952	CHD5	100	92.320	Pongo_abelii
ENSSTOG00000002778	CHD5	100	94.914	ENSPCOG00000022930	CHD5	99	96.680	Propithecus_coquereli
ENSSTOG00000002778	CHD5	95	77.977	ENSPNYG00000003183	chd5	98	77.796	Pundamilia_nyererei
ENSSTOG00000002778	CHD5	100	94.084	ENSRNOG00000011268	Chd5	99	94.298	Rattus_norvegicus
ENSSTOG00000002778	CHD5	98	93.459	ENSRBIG00000032140	CHD5	95	97.217	Rhinopithecus_bieti
ENSSTOG00000002778	CHD5	100	94.759	ENSRROG00000041146	CHD5	99	96.523	Rhinopithecus_roxellana
ENSSTOG00000002778	CHD5	100	90.368	ENSSBOG00000001955	CHD5	100	96.677	Saimiri_boliviensis_boliviensis
ENSSTOG00000002778	CHD5	97	86.006	ENSSHAG00000018641	CHD5	100	85.954	Sarcophilus_harrisii
ENSSTOG00000002778	CHD5	90	86.667	ENSSFOG00015006296	chd5	90	92.558	Scleropages_formosus
ENSSTOG00000002778	CHD5	95	79.180	ENSSDUG00000017526	chd5	92	90.826	Seriola_dumerili
ENSSTOG00000002778	CHD5	98	82.334	ENSSPUG00000010622	CHD5	98	81.401	Sphenodon_punctatus
ENSSTOG00000002778	CHD5	100	96.518	ENSSSCG00000003366	CHD5	100	96.918	Sus_scrofa
ENSSTOG00000002778	CHD5	94	85.052	ENSTGUG00000002634	-	100	85.209	Taeniopygia_guttata
ENSSTOG00000002778	CHD5	54	80.431	ENSTNIG00000004346	chd5	99	81.060	Tetraodon_nigroviridis
ENSSTOG00000002778	CHD5	99	95.190	ENSTTRG00000010468	CHD5	99	95.211	Tursiops_truncatus
ENSSTOG00000002778	CHD5	99	96.263	ENSUAMG00000024509	CHD5	100	95.443	Ursus_americanus
ENSSTOG00000002778	CHD5	99	91.079	ENSUMAG00000024173	CHD5	100	90.733	Ursus_maritimus
ENSSTOG00000002778	CHD5	99	95.337	ENSVVUG00000026480	CHD5	98	95.337	Vulpes_vulpes
ENSSTOG00000002778	CHD5	98	80.685	ENSXETG00000002904	chd5	99	79.968	Xenopus_tropicalis
ENSSTOG00000002778	CHD5	58	83.871	ENSXCOG00000014202	chd5	99	83.871	Xiphophorus_couchianus