EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000002782 (Gene tree)
Gene ID: 101959334
Gene Symbol: SEPT1
Alias: DIFF6|PNUTL3
Full Name: septin 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 7213 bases
Position: chrJH393311.1:12843820-12851032
Accession: 2879
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000002487	MMR_HSR1	PF01926.23	1.7e-08	1	1
ENSSTOP00000027103	MMR_HSR1	PF01926.23	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000039653	SEPT1-201	4966	-	ENSSTOP00000027103	339 (aa)	-	A0A287D0K6
ENSSTOT00000002780	SEPT1-202	1476	XM_013357981	ENSSTOP00000002487	367 (aa)	XP_013213435	I3M134

Gene Model

Click here to download ENSSTOG00000002782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000002782	SEPT1	90	51.360	ENSSTOG00000021378	SEPT7	76	49.855
ENSSTOG00000002782	SEPT1	80	43.382	ENSSTOG00000002386	SEPT14	69	43.243
ENSSTOG00000002782	SEPT1	94	55.942	ENSSTOG00000013357	SEPT2	90	55.942
ENSSTOG00000002782	SEPT1	92	40.643	ENSSTOG00000025813	SEPT8	77	40.643
ENSSTOG00000002782	SEPT1	95	63.112	ENSSTOG00000010725	-	93	64.589
ENSSTOG00000002782	SEPT1	79	45.017	ENSSTOG00000027430	-	51	45.017
ENSSTOG00000002782	SEPT1	79	44.330	ENSSTOG00000019829	SEPT10	67	44.330
ENSSTOG00000002782	SEPT1	79	48.327	ENSSTOG00000012963	SEPT3	86	47.440
ENSSTOG00000002782	SEPT1	87	42.188	ENSSTOG00000012312	SEPT12	88	42.188
ENSSTOG00000002782	SEPT1	97	64.722	ENSSTOG00000028582	SEPT4	98	64.725
ENSSTOG00000002782	SEPT1	93	41.379	ENSSTOG00000008117	SEPT11	76	41.983

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002782	SEPT1	100	97.548	ENSG00000180096	SEPT1	87	100.000	Homo_sapiens
ENSSTOG00000002782	SEPT1	100	95.000	ENSAMEG00000007865	SEPT1	99	95.368	Ailuropoda_melanoleuca
ENSSTOG00000002782	SEPT1	100	96.730	ENSANAG00000029084	SEPT1	100	96.730	Aotus_nancymaae
ENSSTOG00000002782	SEPT1	100	97.003	ENSBTAG00000021219	SEPT1	100	97.003	Bos_taurus
ENSSTOG00000002782	SEPT1	100	95.640	ENSCJAG00000002577	SEPT1	89	95.640	Callithrix_jacchus
ENSSTOG00000002782	SEPT1	100	97.050	ENSCAFG00000016576	SEPT1	99	97.268	Canis_familiaris
ENSSTOG00000002782	SEPT1	100	97.050	ENSCAFG00020017813	SEPT1	99	97.268	Canis_lupus_dingo
ENSSTOG00000002782	SEPT1	100	94.133	ENSCHIG00000017447	SEPT1	100	94.133	Capra_hircus
ENSSTOG00000002782	SEPT1	100	97.003	ENSTSYG00000035596	SEPT1	100	97.003	Carlito_syrichta
ENSSTOG00000002782	SEPT1	100	75.000	ENSCAPG00000001347	SEPT1	100	75.000	Cavia_aperea
ENSSTOG00000002782	SEPT1	100	93.529	ENSCPOG00000003088	SEPT1	99	93.460	Cavia_porcellus
ENSSTOG00000002782	SEPT1	100	82.834	ENSCCAG00000030164	SEPT1	90	82.834	Cebus_capucinus
ENSSTOG00000002782	SEPT1	100	97.275	ENSCATG00000037250	SEPT1	99	97.275	Cercocebus_atys
ENSSTOG00000002782	SEPT1	100	95.882	ENSCLAG00000010486	SEPT1	100	95.882	Chinchilla_lanigera
ENSSTOG00000002782	SEPT1	100	97.275	ENSCSAG00000006056	SEPT1	99	97.275	Chlorocebus_sabaeus
ENSSTOG00000002782	SEPT1	100	97.050	ENSCANG00000035786	SEPT1	89	97.003	Colobus_angolensis_palliatus
ENSSTOG00000002782	SEPT1	100	95.368	ENSCGRG00001003374	Sept1	100	95.368	Cricetulus_griseus_chok1gshd
ENSSTOG00000002782	SEPT1	100	94.550	ENSCGRG00000004919	Sept1	100	94.550	Cricetulus_griseus_crigri
ENSSTOG00000002782	SEPT1	100	96.185	ENSDNOG00000014680	SEPT1	85	96.185	Dasypus_novemcinctus
ENSSTOG00000002782	SEPT1	100	96.458	ENSDORG00000011443	Sept1	100	96.458	Dipodomys_ordii
ENSSTOG00000002782	SEPT1	100	96.460	ENSEASG00005013153	SEPT1	100	96.460	Equus_asinus_asinus
ENSSTOG00000002782	SEPT1	100	96.730	ENSECAG00000009390	SEPT1	96	96.730	Equus_caballus
ENSSTOG00000002782	SEPT1	100	95.095	ENSEEUG00000007661	SEPT1	100	95.095	Erinaceus_europaeus
ENSSTOG00000002782	SEPT1	100	96.730	ENSFCAG00000013541	SEPT1	94	96.730	Felis_catus
ENSSTOG00000002782	SEPT1	100	76.471	ENSGGOG00000017024	SEPT1	88	76.471	Gorilla_gorilla
ENSSTOG00000002782	SEPT1	100	94.823	ENSJJAG00000023131	Sept1	100	94.823	Jaculus_jaculus
ENSSTOG00000002782	SEPT1	100	95.575	ENSLAFG00000027789	SEPT1	99	95.902	Loxodonta_africana
ENSSTOG00000002782	SEPT1	100	97.275	ENSMFAG00000031504	SEPT1	89	97.275	Macaca_fascicularis
ENSSTOG00000002782	SEPT1	100	91.008	ENSMMUG00000021842	SEPT1	97	97.345	Macaca_mulatta
ENSSTOG00000002782	SEPT1	100	85.870	ENSMNEG00000041695	SEPT1	89	85.870	Macaca_nemestrina
ENSSTOG00000002782	SEPT1	100	88.283	ENSMLEG00000039481	SEPT1	88	88.283	Mandrillus_leucophaeus
ENSSTOG00000002782	SEPT1	100	96.458	ENSMAUG00000009531	Sept1	100	96.458	Mesocricetus_auratus
ENSSTOG00000002782	SEPT1	100	97.345	ENSMICG00000011817	SEPT1	94	97.541	Microcebus_murinus
ENSSTOG00000002782	SEPT1	100	96.185	ENSMOCG00000017518	Sept1	100	96.185	Microtus_ochrogaster
ENSSTOG00000002782	SEPT1	100	95.368	MGP_CAROLIEiJ_G0030492	Sept1	100	97.241	Mus_caroli
ENSSTOG00000002782	SEPT1	100	95.640	ENSMUSG00000000486	Sept1	100	97.241	Mus_musculus
ENSSTOG00000002782	SEPT1	100	95.368	MGP_PahariEiJ_G0013702	Sept1	100	96.552	Mus_pahari
ENSSTOG00000002782	SEPT1	100	95.368	MGP_SPRETEiJ_G0031606	Sept1	100	96.552	Mus_spretus
ENSSTOG00000002782	SEPT1	100	95.870	ENSMLUG00000006749	SEPT1	99	95.628	Myotis_lucifugus
ENSSTOG00000002782	SEPT1	100	96.458	ENSNGAG00000021368	Sept1	100	96.458	Nannospalax_galili
ENSSTOG00000002782	SEPT1	100	88.791	ENSMEUG00000000492	SEPT1	100	87.978	Notamacropus_eugenii
ENSSTOG00000002782	SEPT1	100	94.550	ENSOPRG00000007981	SEPT1	100	94.550	Ochotona_princeps
ENSSTOG00000002782	SEPT1	100	94.118	ENSODEG00000014531	SEPT1	100	94.022	Octodon_degus
ENSSTOG00000002782	SEPT1	100	88.283	ENSOANG00000005331	SEPT1	100	87.193	Ornithorhynchus_anatinus
ENSSTOG00000002782	SEPT1	100	97.935	ENSOGAG00000013350	SEPT1	99	98.087	Otolemur_garnettii
ENSSTOG00000002782	SEPT1	100	95.894	ENSOARG00000006135	SEPT1	99	96.196	Ovis_aries
ENSSTOG00000002782	SEPT1	100	79.019	ENSPPAG00000032680	SEPT1	87	79.019	Pan_paniscus
ENSSTOG00000002782	SEPT1	100	96.460	ENSPPRG00000008648	-	100	96.721	Panthera_pardus
ENSSTOG00000002782	SEPT1	84	96.104	ENSPTIG00000006718	SEPT1	87	96.104	Panthera_tigris_altaica
ENSSTOG00000002782	SEPT1	100	97.548	ENSPTRG00000007998	SEPT1	89	97.548	Pan_troglodytes
ENSSTOG00000002782	SEPT1	100	88.283	ENSPANG00000032364	SEPT1	99	88.283	Papio_anubis
ENSSTOG00000002782	SEPT1	100	95.913	ENSPEMG00000023616	Sept1	100	95.913	Peromyscus_maniculatus_bairdii
ENSSTOG00000002782	SEPT1	100	89.918	ENSPCIG00000001537	SEPT1	100	88.556	Phascolarctos_cinereus
ENSSTOG00000002782	SEPT1	84	96.753	ENSPPYG00000007270	-	100	96.753	Pongo_abelii
ENSSTOG00000002782	SEPT1	100	94.823	ENSPCAG00000009042	SEPT1	100	94.823	Procavia_capensis
ENSSTOG00000002782	SEPT1	100	97.548	ENSPCOG00000028121	SEPT1	90	97.548	Propithecus_coquereli
ENSSTOG00000002782	SEPT1	100	97.548	ENSPVAG00000008655	SEPT1	100	97.548	Pteropus_vampyrus
ENSSTOG00000002782	SEPT1	100	94.823	ENSRNOG00000017804	Sept1	100	94.823	Rattus_norvegicus
ENSSTOG00000002782	SEPT1	100	96.755	ENSRBIG00000036580	SEPT1	89	96.730	Rhinopithecus_bieti
ENSSTOG00000002782	SEPT1	100	96.755	ENSRROG00000038708	SEPT1	99	96.730	Rhinopithecus_roxellana
ENSSTOG00000002782	SEPT1	100	95.913	ENSSBOG00000021733	SEPT1	89	95.913	Saimiri_boliviensis_boliviensis
ENSSTOG00000002782	SEPT1	100	88.496	ENSSHAG00000006478	SEPT1	99	87.705	Sarcophilus_harrisii
ENSSTOG00000002782	SEPT1	100	97.003	ENSSSCG00000007800	SEPT1	100	97.003	Sus_scrofa
ENSSTOG00000002782	SEPT1	100	97.003	ENSTTRG00000017272	SEPT1	100	97.003	Tursiops_truncatus
ENSSTOG00000002782	SEPT1	100	97.548	ENSUAMG00000027438	SEPT1	99	97.275	Ursus_americanus
ENSSTOG00000002782	SEPT1	100	97.548	ENSUMAG00000011345	SEPT1	100	97.548	Ursus_maritimus
ENSSTOG00000002782	SEPT1	99	96.726	ENSVVUG00000026116	SEPT1	90	96.726	Vulpes_vulpes