EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000002783 (Gene tree)
Gene ID: 101955990
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 27927 bases
Position: chrJH393398.1:3225752-3253678
Accession: 10520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000002498	RRM_5	PF13893.6	9.1e-07	1	1
ENSSTOP00000002498	RRM_1	PF00076.22	3.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000002791	SAFB-201	2771	XM_013361464	ENSSTOP00000002498	866 (aa)	-	I3M144

Gene Model

Click here to download ENSSTOG00000002783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002783	SAFB	100	90.564	ENSG00000160633	SAFB	93	90.460	Homo_sapiens
ENSSTOG00000002783	SAFB	100	91.399	ENSAMEG00000012254	SAFB	94	90.482	Ailuropoda_melanoleuca
ENSSTOG00000002783	SAFB	96	38.061	ENSACIG00000006247	safb	65	39.661	Amphilophus_citrinellus
ENSSTOG00000002783	SAFB	96	62.631	ENSAPLG00000006355	-	65	61.687	Anas_platyrhynchos
ENSSTOG00000002783	SAFB	100	64.960	ENSAPLG00000005780	-	99	63.554	Anas_platyrhynchos
ENSSTOG00000002783	SAFB	100	90.575	ENSANAG00000028821	SAFB	93	90.575	Aotus_nancymaae
ENSSTOG00000002783	SAFB	91	43.207	ENSAMXG00000018154	safb	58	41.197	Astyanax_mexicanus
ENSSTOG00000002783	SAFB	100	86.552	ENSBTAG00000007875	SAFB	93	86.552	Bos_taurus
ENSSTOG00000002783	SAFB	93	93.289	ENSCJAG00000017081	SAFB	100	92.007	Callithrix_jacchus
ENSSTOG00000002783	SAFB	100	92.281	ENSCAFG00000018803	SAFB	81	92.281	Canis_familiaris
ENSSTOG00000002783	SAFB	100	92.281	ENSCAFG00020018943	SAFB	93	92.281	Canis_lupus_dingo
ENSSTOG00000002783	SAFB	100	85.632	ENSCHIG00000007262	SAFB	93	85.632	Capra_hircus
ENSSTOG00000002783	SAFB	61	78.383	ENSTSYG00000001851	-	100	75.138	Carlito_syrichta
ENSSTOG00000002783	SAFB	100	81.910	ENSCAPG00000012121	SAFB	100	88.067	Cavia_aperea
ENSSTOG00000002783	SAFB	100	90.536	ENSCPOG00000026322	SAFB	93	90.308	Cavia_porcellus
ENSSTOG00000002783	SAFB	100	90.815	ENSCCAG00000020193	SAFB	93	90.356	Cebus_capucinus
ENSSTOG00000002783	SAFB	100	90.460	ENSCATG00000029994	SAFB	93	90.460	Cercocebus_atys
ENSSTOG00000002783	SAFB	100	92.317	ENSCLAG00000007734	SAFB	93	93.234	Chinchilla_lanigera
ENSSTOG00000002783	SAFB	100	90.575	ENSCSAG00000009949	SAFB	93	90.575	Chlorocebus_sabaeus
ENSSTOG00000002783	SAFB	93	97.619	ENSCHOG00000003208	SAFB	93	97.619	Choloepus_hoffmanni
ENSSTOG00000002783	SAFB	98	60.845	ENSCPBG00000010936	-	63	59.758	Chrysemys_picta_bellii
ENSSTOG00000002783	SAFB	98	63.562	ENSCPBG00000010928	-	99	62.121	Chrysemys_picta_bellii
ENSSTOG00000002783	SAFB	100	84.793	ENSCANG00000019754	-	93	84.793	Colobus_angolensis_palliatus
ENSSTOG00000002783	SAFB	95	94.527	ENSCANG00000004774	-	91	94.527	Colobus_angolensis_palliatus
ENSSTOG00000002783	SAFB	100	87.314	ENSCGRG00001002254	Safb	93	87.314	Cricetulus_griseus_chok1gshd
ENSSTOG00000002783	SAFB	97	84.783	ENSCGRG00000011529	Safb	96	84.783	Cricetulus_griseus_crigri
ENSSTOG00000002783	SAFB	96	38.526	ENSCSEG00000019870	safb	60	36.332	Cynoglossus_semilaevis
ENSSTOG00000002783	SAFB	91	39.541	ENSDARG00000020467	safb	59	40.933	Danio_rerio
ENSSTOG00000002783	SAFB	100	89.093	ENSDNOG00000015746	SAFB	95	89.121	Dasypus_novemcinctus
ENSSTOG00000002783	SAFB	100	86.659	ENSDORG00000016200	Safb	93	86.234	Dipodomys_ordii
ENSSTOG00000002783	SAFB	86	85.507	ENSETEG00000018679	SAFB	85	85.507	Echinops_telfairi
ENSSTOG00000002783	SAFB	100	87.200	ENSEASG00005023019	SAFB	93	87.771	Equus_asinus_asinus
ENSSTOG00000002783	SAFB	100	89.643	ENSECAG00000018659	SAFB	83	89.643	Equus_caballus
ENSSTOG00000002783	SAFB	96	41.304	ENSELUG00000022327	safb	60	52.133	Esox_lucius
ENSSTOG00000002783	SAFB	100	91.830	ENSFCAG00000011835	SAFB	93	91.830	Felis_catus
ENSSTOG00000002783	SAFB	98	57.842	ENSFALG00000013881	-	64	59.445	Ficedula_albicollis
ENSSTOG00000002783	SAFB	100	63.823	ENSFALG00000013882	-	85	62.870	Ficedula_albicollis
ENSSTOG00000002783	SAFB	95	86.185	ENSFDAG00000020306	SAFB	91	92.945	Fukomys_damarensis
ENSSTOG00000002783	SAFB	63	46.113	ENSGMOG00000014280	safb	58	38.448	Gadus_morhua
ENSSTOG00000002783	SAFB	100	64.579	ENSGALG00000013365	-	93	63.284	Gallus_gallus
ENSSTOG00000002783	SAFB	95	62.030	ENSGAGG00000008424	-	63	59.432	Gopherus_agassizii
ENSSTOG00000002783	SAFB	78	58.866	ENSGAGG00000017702	-	100	56.647	Gopherus_agassizii
ENSSTOG00000002783	SAFB	100	90.345	ENSGGOG00000015109	SAFB	93	90.345	Gorilla_gorilla
ENSSTOG00000002783	SAFB	100	95.040	ENSHGLG00000015883	SAFB	93	95.040	Heterocephalus_glaber_female
ENSSTOG00000002783	SAFB	98	36.436	ENSHCOG00000001705	safb	64	36.824	Hippocampus_comes
ENSSTOG00000002783	SAFB	96	41.560	ENSIPUG00000024869	safb2	58	43.902	Ictalurus_punctatus
ENSSTOG00000002783	SAFB	100	88.826	ENSJJAG00000009021	Safb	94	88.826	Jaculus_jaculus
ENSSTOG00000002783	SAFB	98	38.724	ENSLBEG00000006015	safb	59	40.625	Labrus_bergylta
ENSSTOG00000002783	SAFB	65	50.594	ENSLACG00000018090	SAFB	62	51.597	Latimeria_chalumnae
ENSSTOG00000002783	SAFB	98	45.161	ENSLOCG00000003613	safb	69	43.820	Lepisosteus_oculatus
ENSSTOG00000002783	SAFB	99	87.875	ENSLAFG00000003840	SAFB	93	86.721	Loxodonta_africana
ENSSTOG00000002783	SAFB	100	90.356	ENSMFAG00000003885	SAFB	93	89.897	Macaca_fascicularis
ENSSTOG00000002783	SAFB	100	90.460	ENSMMUG00000017970	SAFB	93	90.460	Macaca_mulatta
ENSSTOG00000002783	SAFB	100	86.682	ENSMNEG00000035637	SAFB	93	86.223	Macaca_nemestrina
ENSSTOG00000002783	SAFB	100	84.554	ENSMLEG00000038637	SAFB	93	83.032	Mandrillus_leucophaeus
ENSSTOG00000002783	SAFB	98	39.821	ENSMZEG00005009120	safb	60	41.026	Maylandia_zebra
ENSSTOG00000002783	SAFB	100	63.667	ENSMGAG00000001101	-	96	62.714	Meleagris_gallopavo
ENSSTOG00000002783	SAFB	89	59.847	ENSMGAG00000001051	-	92	59.463	Meleagris_gallopavo
ENSSTOG00000002783	SAFB	56	92.593	ENSMAUG00000005013	Safb	100	92.593	Mesocricetus_auratus
ENSSTOG00000002783	SAFB	100	87.126	ENSMICG00000008739	-	93	85.862	Microcebus_murinus
ENSSTOG00000002783	SAFB	83	76.283	ENSMICG00000046795	-	90	73.538	Microcebus_murinus
ENSSTOG00000002783	SAFB	100	86.971	ENSMOCG00000014040	Safb	93	86.971	Microtus_ochrogaster
ENSSTOG00000002783	SAFB	100	73.176	ENSMODG00000001236	SAFB	93	73.176	Monodelphis_domestica
ENSSTOG00000002783	SAFB	96	39.038	ENSMALG00000020330	safb	64	38.655	Monopterus_albus
ENSSTOG00000002783	SAFB	100	87.071	MGP_CAROLIEiJ_G0021780	Safb	93	87.071	Mus_caroli
ENSSTOG00000002783	SAFB	100	87.071	ENSMUSG00000071054	Safb	93	87.185	Mus_musculus
ENSSTOG00000002783	SAFB	100	86.971	MGP_PahariEiJ_G0020769	Safb	93	86.971	Mus_pahari
ENSSTOG00000002783	SAFB	100	91.149	ENSMPUG00000006123	SAFB	88	91.149	Mustela_putorius_furo
ENSSTOG00000002783	SAFB	100	89.770	ENSMLUG00000001081	SAFB	93	89.770	Myotis_lucifugus
ENSSTOG00000002783	SAFB	100	84.396	ENSNGAG00000019882	Safb	93	84.282	Nannospalax_galili
ENSSTOG00000002783	SAFB	99	86.872	ENSNLEG00000013551	SAFB	93	89.784	Nomascus_leucogenys
ENSSTOG00000002783	SAFB	95	83.777	ENSOPRG00000011561	-	100	84.746	Ochotona_princeps
ENSSTOG00000002783	SAFB	100	94.725	ENSODEG00000014838	SAFB	93	94.725	Octodon_degus
ENSSTOG00000002783	SAFB	98	39.485	ENSONIG00000002318	safb	60	41.075	Oreochromis_niloticus
ENSSTOG00000002783	SAFB	97	82.130	ENSOCUG00000014628	SAFB	63	85.502	Oryctolagus_cuniculus
ENSSTOG00000002783	SAFB	92	40.336	ENSORLG00000016989	safb	60	37.607	Oryzias_latipes
ENSSTOG00000002783	SAFB	97	39.197	ENSORLG00020000404	safb	60	36.796	Oryzias_latipes_hni
ENSSTOG00000002783	SAFB	97	39.840	ENSORLG00015010733	safb	60	37.436	Oryzias_latipes_hsok
ENSSTOG00000002783	SAFB	100	84.977	ENSOGAG00000027769	SAFB	93	84.096	Otolemur_garnettii
ENSSTOG00000002783	SAFB	84	80.137	ENSOARG00000007856	-	100	79.863	Ovis_aries
ENSSTOG00000002783	SAFB	100	82.644	ENSOARG00000007662	-	93	80.575	Ovis_aries
ENSSTOG00000002783	SAFB	100	90.241	ENSPPAG00000035129	SAFB	93	89.782	Pan_paniscus
ENSSTOG00000002783	SAFB	100	91.830	ENSPPRG00000017197	SAFB	93	91.830	Panthera_pardus
ENSSTOG00000002783	SAFB	100	90.241	ENSPTRG00000010335	SAFB	93	89.782	Pan_troglodytes
ENSSTOG00000002783	SAFB	100	90.241	ENSPANG00000007770	SAFB	93	89.782	Papio_anubis
ENSSTOG00000002783	SAFB	100	62.905	ENSPSIG00000011679	-	63	61.217	Pelodiscus_sinensis
ENSSTOG00000002783	SAFB	100	60.200	ENSPSIG00000009367	-	59	57.785	Pelodiscus_sinensis
ENSSTOG00000002783	SAFB	100	88.229	ENSPEMG00000020428	Safb	93	88.229	Peromyscus_maniculatus_bairdii
ENSSTOG00000002783	SAFB	62	80.037	ENSPCIG00000009504	-	99	80.522	Phascolarctos_cinereus
ENSSTOG00000002783	SAFB	91	39.039	ENSPFOG00000007745	safb	67	37.931	Poecilia_formosa
ENSSTOG00000002783	SAFB	100	90.899	ENSPPYG00000009428	SAFB	93	90.899	Pongo_abelii
ENSSTOG00000002783	SAFB	100	83.391	ENSPCAG00000006475	SAFB	93	83.968	Procavia_capensis
ENSSTOG00000002783	SAFB	100	83.162	ENSPCOG00000014090	SAFB	93	80.115	Propithecus_coquereli
ENSSTOG00000002783	SAFB	100	82.163	ENSPVAG00000004913	SAFB	93	82.048	Pteropus_vampyrus
ENSSTOG00000002783	SAFB	96	42.873	ENSPNAG00000021838	safb	59	41.897	Pygocentrus_nattereri
ENSSTOG00000002783	SAFB	100	86.545	ENSRNOG00000050543	Safb	98	85.801	Rattus_norvegicus
ENSSTOG00000002783	SAFB	100	77.241	ENSRBIG00000042509	SAFB	92	76.782	Rhinopithecus_bieti
ENSSTOG00000002783	SAFB	100	90.471	ENSRROG00000029278	SAFB	93	90.011	Rhinopithecus_roxellana
ENSSTOG00000002783	SAFB	100	90.920	ENSSBOG00000026291	SAFB	93	90.920	Saimiri_boliviensis_boliviensis
ENSSTOG00000002783	SAFB	98	43.157	ENSSFOG00015008156	safb	61	44.237	Scleropages_formosus
ENSSTOG00000002783	SAFB	98	38.914	ENSSMAG00000009316	safb	60	40.339	Scophthalmus_maximus
ENSSTOG00000002783	SAFB	100	84.138	ENSSARG00000010475	SAFB	100	84.023	Sorex_araneus
ENSSTOG00000002783	SAFB	62	56.007	ENSSPUG00000009747	-	67	55.823	Sphenodon_punctatus
ENSSTOG00000002783	SAFB	57	55.094	ENSSPUG00000009820	-	64	57.223	Sphenodon_punctatus
ENSSTOG00000002783	SAFB	100	90.899	ENSSSCG00000013522	SAFB	91	91.096	Sus_scrofa
ENSSTOG00000002783	SAFB	96	62.959	ENSTGUG00000000502	-	93	62.485	Taeniopygia_guttata
ENSSTOG00000002783	SAFB	92	39.568	ENSTRUG00000003567	safb	60	38.889	Takifugu_rubripes
ENSSTOG00000002783	SAFB	91	43.176	ENSTNIG00000015470	safb	69	38.765	Tetraodon_nigroviridis
ENSSTOG00000002783	SAFB	69	87.121	ENSTBEG00000013124	-	56	91.667	Tupaia_belangeri
ENSSTOG00000002783	SAFB	92	87.845	ENSTTRG00000013588	SAFB	85	87.218	Tursiops_truncatus
ENSSTOG00000002783	SAFB	84	89.581	ENSUAMG00000024543	SAFB	100	84.519	Ursus_americanus
ENSSTOG00000002783	SAFB	82	94.326	ENSUMAG00000009734	SAFB	88	87.965	Ursus_maritimus
ENSSTOG00000002783	SAFB	84	81.298	ENSVPAG00000012043	SAFB	79	97.656	Vicugna_pacos
ENSSTOG00000002783	SAFB	100	91.954	ENSVVUG00000013720	SAFB	81	91.954	Vulpes_vulpes
ENSSTOG00000002783	SAFB	65	49.117	ENSXETG00000008755	safb	63	48.768	Xenopus_tropicalis