EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000002922 (Gene tree)
Gene ID: 101966709
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 44716 bases
Position: chrJH393324.1:11175526-11220241
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000002628	PRP1_N	PF06424.12	1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000002938	PRPF6-201	2772	XM_005325407	ENSSTOP00000002628	923 (aa)	-	I3M1E2

Gene Model

Click here to download ENSSTOG00000002922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000002922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000002922	PRPF6	100	95.329	ENSG00000101161	PRPF6	100	95.329	Homo_sapiens
ENSSTOG00000002922	PRPF6	100	90.234	ENSAPOG00000010395	prpf6	96	91.083	Acanthochromis_polyacanthus
ENSSTOG00000002922	PRPF6	100	94.804	ENSAMEG00000001916	PRPF6	99	94.804	Ailuropoda_melanoleuca
ENSSTOG00000002922	PRPF6	100	89.915	ENSACIG00000019862	prpf6	96	90.764	Amphilophus_citrinellus
ENSSTOG00000002922	PRPF6	100	90.127	ENSAOCG00000012988	prpf6	96	90.977	Amphiprion_ocellaris
ENSSTOG00000002922	PRPF6	100	83.758	ENSAPEG00000008301	prpf6	100	84.501	Amphiprion_percula
ENSSTOG00000002922	PRPF6	100	89.597	ENSATEG00000005581	prpf6	96	90.446	Anabas_testudineus
ENSSTOG00000002922	PRPF6	100	95.223	ENSACAG00000006464	PRPF6	95	95.223	Anolis_carolinensis
ENSSTOG00000002922	PRPF6	100	95.435	ENSANAG00000012661	PRPF6	100	95.647	Aotus_nancymaae
ENSSTOG00000002922	PRPF6	100	89.809	ENSACLG00000025875	prpf6	96	90.658	Astatotilapia_calliptera
ENSSTOG00000002922	PRPF6	99	90.117	ENSAMXG00000001929	prpf6	96	90.967	Astyanax_mexicanus
ENSSTOG00000002922	PRPF6	100	95.648	ENSBTAG00000011656	PRPF6	100	95.648	Bos_taurus
ENSSTOG00000002922	PRPF6	100	95.435	ENSCJAG00000010616	PRPF6	100	95.435	Callithrix_jacchus
ENSSTOG00000002922	PRPF6	100	95.860	ENSCAFG00000013165	PRPF6	100	95.860	Canis_familiaris
ENSSTOG00000002922	PRPF6	100	95.860	ENSCAFG00020002050	PRPF6	100	95.860	Canis_lupus_dingo
ENSSTOG00000002922	PRPF6	100	95.648	ENSCHIG00000018187	PRPF6	100	95.648	Capra_hircus
ENSSTOG00000002922	PRPF6	100	96.072	ENSTSYG00000007814	PRPF6	100	96.072	Carlito_syrichta
ENSSTOG00000002922	PRPF6	97	97.036	ENSCAPG00000015077	PRPF6	100	97.036	Cavia_aperea
ENSSTOG00000002922	PRPF6	100	97.028	ENSCPOG00000007518	PRPF6	100	97.028	Cavia_porcellus
ENSSTOG00000002922	PRPF6	100	92.038	ENSCCAG00000024564	PRPF6	100	92.251	Cebus_capucinus
ENSSTOG00000002922	PRPF6	100	95.223	ENSCATG00000037473	PRPF6	100	95.223	Cercocebus_atys
ENSSTOG00000002922	PRPF6	100	92.781	ENSCLAG00000003854	PRPF6	100	92.994	Chinchilla_lanigera
ENSSTOG00000002922	PRPF6	100	89.662	ENSCSAG00000016742	PRPF6	100	90.295	Chlorocebus_sabaeus
ENSSTOG00000002922	PRPF6	85	78.489	ENSCHOG00000003315	-	99	78.489	Choloepus_hoffmanni
ENSSTOG00000002922	PRPF6	100	95.541	ENSCPBG00000013964	PRPF6	96	95.541	Chrysemys_picta_bellii
ENSSTOG00000002922	PRPF6	99	71.700	ENSCING00000008817	-	99	72.017	Ciona_intestinalis
ENSSTOG00000002922	PRPF6	100	95.223	ENSCANG00000038230	PRPF6	100	95.223	Colobus_angolensis_palliatus
ENSSTOG00000002922	PRPF6	100	96.603	ENSCGRG00001022666	Prpf6	100	96.603	Cricetulus_griseus_chok1gshd
ENSSTOG00000002922	PRPF6	100	84.395	ENSCSEG00000018561	prpf6	100	85.244	Cynoglossus_semilaevis
ENSSTOG00000002922	PRPF6	100	90.234	ENSCVAG00000010550	prpf6	96	91.083	Cyprinodon_variegatus
ENSSTOG00000002922	PRPF6	100	89.703	ENSDARG00000091367	prpf6	99	90.552	Danio_rerio
ENSSTOG00000002922	PRPF6	100	95.223	ENSDNOG00000040544	PRPF6	100	95.223	Dasypus_novemcinctus
ENSSTOG00000002922	PRPF6	91	95.799	ENSDORG00000005406	Prpf6	100	95.799	Dipodomys_ordii
ENSSTOG00000002922	PRPF6	99	69.882	FBgn0036828	CG6841	98	70.311	Drosophila_melanogaster
ENSSTOG00000002922	PRPF6	87	95.766	ENSETEG00000004447	PRPF6	85	95.766	Echinops_telfairi
ENSSTOG00000002922	PRPF6	99	84.110	ENSEBUG00000008835	prpf6	99	84.322	Eptatretus_burgeri
ENSSTOG00000002922	PRPF6	100	96.072	ENSEASG00005023115	PRPF6	100	96.072	Equus_asinus_asinus
ENSSTOG00000002922	PRPF6	100	91.614	ENSECAG00000013983	PRPF6	100	91.826	Equus_caballus
ENSSTOG00000002922	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	80	100.000	Erinaceus_europaeus
ENSSTOG00000002922	PRPF6	100	88.535	ENSELUG00000001945	prpf6	93	89.172	Esox_lucius
ENSSTOG00000002922	PRPF6	100	95.860	ENSFCAG00000001183	PRPF6	100	95.860	Felis_catus
ENSSTOG00000002922	PRPF6	100	95.435	ENSFALG00000010326	-	97	95.435	Ficedula_albicollis
ENSSTOG00000002922	PRPF6	100	87.686	ENSFALG00000006046	-	97	88.217	Ficedula_albicollis
ENSSTOG00000002922	PRPF6	100	95.541	ENSFDAG00000006451	PRPF6	100	96.829	Fukomys_damarensis
ENSSTOG00000002922	PRPF6	100	90.764	ENSFHEG00000000560	prpf6	96	91.189	Fundulus_heteroclitus
ENSSTOG00000002922	PRPF6	100	86.484	ENSGMOG00000015622	prpf6	99	87.117	Gadus_morhua
ENSSTOG00000002922	PRPF6	100	95.223	ENSGALG00000006001	PRPF6	100	95.223	Gallus_gallus
ENSSTOG00000002922	PRPF6	100	85.669	ENSGAFG00000021109	prpf6	96	86.518	Gambusia_affinis
ENSSTOG00000002922	PRPF6	100	88.641	ENSGACG00000002576	prpf6	99	89.066	Gasterosteus_aculeatus
ENSSTOG00000002922	PRPF6	100	95.435	ENSGAGG00000008653	PRPF6	96	95.435	Gopherus_agassizii
ENSSTOG00000002922	PRPF6	100	95.329	ENSGGOG00000016876	PRPF6	100	95.329	Gorilla_gorilla
ENSSTOG00000002922	PRPF6	100	89.809	ENSHBUG00000004496	prpf6	96	90.658	Haplochromis_burtoni
ENSSTOG00000002922	PRPF6	100	96.815	ENSHGLG00000009222	PRPF6	100	96.815	Heterocephalus_glaber_female
ENSSTOG00000002922	PRPF6	97	96.732	ENSHGLG00100016600	PRPF6	100	96.732	Heterocephalus_glaber_male
ENSSTOG00000002922	PRPF6	100	88.641	ENSHCOG00000011513	prpf6	96	89.490	Hippocampus_comes
ENSSTOG00000002922	PRPF6	100	90.658	ENSIPUG00000004912	prpf6	96	91.083	Ictalurus_punctatus
ENSSTOG00000002922	PRPF6	100	97.028	ENSJJAG00000000836	Prpf6	100	97.028	Jaculus_jaculus
ENSSTOG00000002922	PRPF6	100	89.597	ENSKMAG00000017800	prpf6	96	90.446	Kryptolebias_marmoratus
ENSSTOG00000002922	PRPF6	100	89.278	ENSLBEG00000012582	prpf6	96	89.703	Labrus_bergylta
ENSSTOG00000002922	PRPF6	100	91.720	ENSLOCG00000004827	prpf6	96	90.977	Lepisosteus_oculatus
ENSSTOG00000002922	PRPF6	100	95.223	ENSLAFG00000005272	PRPF6	100	95.223	Loxodonta_africana
ENSSTOG00000002922	PRPF6	100	95.223	ENSMFAG00000037542	PRPF6	100	95.223	Macaca_fascicularis
ENSSTOG00000002922	PRPF6	100	88.653	ENSMMUG00000015558	PRPF6	98	95.156	Macaca_mulatta
ENSSTOG00000002922	PRPF6	100	80.741	ENSMNEG00000045555	PRPF6	100	81.164	Macaca_nemestrina
ENSSTOG00000002922	PRPF6	100	89.915	ENSMAMG00000010718	prpf6	96	90.764	Mastacembelus_armatus
ENSSTOG00000002922	PRPF6	100	89.290	ENSMZEG00005015261	-	99	90.138	Maylandia_zebra
ENSSTOG00000002922	PRPF6	94	89.128	ENSMZEG00005026539	prpf6	100	90.034	Maylandia_zebra
ENSSTOG00000002922	PRPF6	97	95.316	ENSMGAG00000006634	PRPF6	100	95.316	Meleagris_gallopavo
ENSSTOG00000002922	PRPF6	100	96.709	ENSMAUG00000013969	Prpf6	100	96.709	Mesocricetus_auratus
ENSSTOG00000002922	PRPF6	91	94.405	ENSMICG00000017793	PRPF6	99	94.405	Microcebus_murinus
ENSSTOG00000002922	PRPF6	100	96.603	ENSMOCG00000001701	Prpf6	100	96.603	Microtus_ochrogaster
ENSSTOG00000002922	PRPF6	100	88.960	ENSMMOG00000020419	prpf6	100	89.809	Mola_mola
ENSSTOG00000002922	PRPF6	99	95.690	ENSMODG00000017051	PRPF6	99	95.690	Monodelphis_domestica
ENSSTOG00000002922	PRPF6	99	90.021	ENSMALG00000000089	prpf6	100	90.451	Monopterus_albus
ENSSTOG00000002922	PRPF6	100	94.583	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSSTOG00000002922	PRPF6	100	96.709	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSSTOG00000002922	PRPF6	100	96.709	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSSTOG00000002922	PRPF6	100	96.709	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSSTOG00000002922	PRPF6	91	95.119	ENSMPUG00000008673	PRPF6	99	95.119	Mustela_putorius_furo
ENSSTOG00000002922	PRPF6	100	96.921	ENSNGAG00000003365	Prpf6	100	96.921	Nannospalax_galili
ENSSTOG00000002922	PRPF6	100	89.915	ENSNBRG00000015025	prpf6	96	90.764	Neolamprologus_brichardi
ENSSTOG00000002922	PRPF6	100	95.223	ENSNLEG00000010208	PRPF6	100	95.223	Nomascus_leucogenys
ENSSTOG00000002922	PRPF6	100	88.757	ENSMEUG00000009824	-	90	88.757	Notamacropus_eugenii
ENSSTOG00000002922	PRPF6	100	90.764	ENSODEG00000004841	PRPF6	100	90.977	Octodon_degus
ENSSTOG00000002922	PRPF6	100	89.809	ENSONIG00000017406	prpf6	96	90.658	Oreochromis_niloticus
ENSSTOG00000002922	PRPF6	100	95.754	ENSOANG00000004920	PRPF6	100	95.754	Ornithorhynchus_anatinus
ENSSTOG00000002922	PRPF6	99	94.319	ENSOCUG00000014151	PRPF6	100	94.319	Oryctolagus_cuniculus
ENSSTOG00000002922	PRPF6	100	89.597	ENSORLG00000009592	prpf6	96	90.021	Oryzias_latipes
ENSSTOG00000002922	PRPF6	100	89.703	ENSORLG00020001458	prpf6	96	90.127	Oryzias_latipes_hni
ENSSTOG00000002922	PRPF6	100	89.703	ENSORLG00015018762	prpf6	96	90.127	Oryzias_latipes_hsok
ENSSTOG00000002922	PRPF6	100	89.597	ENSOMEG00000012174	prpf6	96	90.446	Oryzias_melastigma
ENSSTOG00000002922	PRPF6	100	88.123	ENSOGAG00000007573	PRPF6	100	88.335	Otolemur_garnettii
ENSSTOG00000002922	PRPF6	100	95.223	ENSOARG00000008776	PRPF6	99	95.223	Ovis_aries
ENSSTOG00000002922	PRPF6	100	95.329	ENSPPAG00000008686	PRPF6	100	95.329	Pan_paniscus
ENSSTOG00000002922	PRPF6	100	95.754	ENSPPRG00000008497	PRPF6	100	95.754	Panthera_pardus
ENSSTOG00000002922	PRPF6	97	95.643	ENSPTIG00000011184	PRPF6	97	95.643	Panthera_tigris_altaica
ENSSTOG00000002922	PRPF6	100	95.329	ENSPTRG00000013765	PRPF6	100	95.329	Pan_troglodytes
ENSSTOG00000002922	PRPF6	100	94.692	ENSPANG00000024135	PRPF6	100	94.692	Papio_anubis
ENSSTOG00000002922	PRPF6	100	91.507	ENSPKIG00000005627	prpf6	99	92.144	Paramormyrops_kingsleyae
ENSSTOG00000002922	PRPF6	94	95.470	ENSPSIG00000007717	PRPF6	100	95.470	Pelodiscus_sinensis
ENSSTOG00000002922	PRPF6	100	88.217	ENSPMGG00000008925	prpf6	96	88.960	Periophthalmus_magnuspinnatus
ENSSTOG00000002922	PRPF6	100	96.603	ENSPEMG00000016036	Prpf6	100	96.603	Peromyscus_maniculatus_bairdii
ENSSTOG00000002922	PRPF6	99	85.456	ENSPMAG00000006144	prpf6	99	85.987	Petromyzon_marinus
ENSSTOG00000002922	PRPF6	100	95.860	ENSPCIG00000017909	PRPF6	100	95.860	Phascolarctos_cinereus
ENSSTOG00000002922	PRPF6	100	90.340	ENSPFOG00000006431	prpf6	96	91.189	Poecilia_formosa
ENSSTOG00000002922	PRPF6	100	90.234	ENSPLAG00000005974	prpf6	96	91.083	Poecilia_latipinna
ENSSTOG00000002922	PRPF6	100	90.446	ENSPMEG00000009977	prpf6	96	91.295	Poecilia_mexicana
ENSSTOG00000002922	PRPF6	100	90.340	ENSPREG00000017993	prpf6	92	91.189	Poecilia_reticulata
ENSSTOG00000002922	PRPF6	100	94.798	ENSPPYG00000011256	PRPF6	100	94.798	Pongo_abelii
ENSSTOG00000002922	PRPF6	95	98.230	ENSPCAG00000006536	PRPF6	88	98.230	Procavia_capensis
ENSSTOG00000002922	PRPF6	100	95.648	ENSPCOG00000016881	PRPF6	100	95.648	Propithecus_coquereli
ENSSTOG00000002922	PRPF6	100	89.703	ENSPVAG00000014316	PRPF6	100	89.915	Pteropus_vampyrus
ENSSTOG00000002922	PRPF6	100	73.383	ENSPNYG00000001939	prpf6	96	76.022	Pundamilia_nyererei
ENSSTOG00000002922	PRPF6	100	90.446	ENSPNAG00000015606	prpf6	96	91.295	Pygocentrus_nattereri
ENSSTOG00000002922	PRPF6	100	96.603	ENSRNOG00000051498	Prpf6	100	96.603	Rattus_norvegicus
ENSSTOG00000002922	PRPF6	100	95.223	ENSRBIG00000043613	PRPF6	100	95.223	Rhinopithecus_bieti
ENSSTOG00000002922	PRPF6	100	91.860	ENSRROG00000040969	PRPF6	100	92.072	Rhinopithecus_roxellana
ENSSTOG00000002922	PRPF6	91	96.263	ENSSBOG00000020632	PRPF6	93	96.263	Saimiri_boliviensis_boliviensis
ENSSTOG00000002922	PRPF6	100	95.860	ENSSHAG00000016810	PRPF6	100	95.860	Sarcophilus_harrisii
ENSSTOG00000002922	PRPF6	99	91.524	ENSSFOG00015020859	prpf6	100	92.167	Scleropages_formosus
ENSSTOG00000002922	PRPF6	100	89.172	ENSSMAG00000008112	prpf6	96	89.597	Scophthalmus_maximus
ENSSTOG00000002922	PRPF6	100	89.809	ENSSDUG00000016142	prpf6	96	90.658	Seriola_dumerili
ENSSTOG00000002922	PRPF6	100	89.809	ENSSLDG00000025283	prpf6	100	87.261	Seriola_lalandi_dorsalis
ENSSTOG00000002922	PRPF6	94	93.545	ENSSPUG00000018260	PRPF6	100	93.771	Sphenodon_punctatus
ENSSTOG00000002922	PRPF6	100	89.809	ENSSPAG00000015850	prpf6	96	90.658	Stegastes_partitus
ENSSTOG00000002922	PRPF6	100	95.754	ENSSSCG00000029119	PRPF6	100	95.470	Sus_scrofa
ENSSTOG00000002922	PRPF6	100	95.541	ENSTGUG00000007221	PRPF6	99	95.541	Taeniopygia_guttata
ENSSTOG00000002922	PRPF6	100	88.747	ENSTRUG00000002920	prpf6	96	89.597	Takifugu_rubripes
ENSSTOG00000002922	PRPF6	100	82.471	ENSTNIG00000017873	prpf6	100	83.316	Tetraodon_nigroviridis
ENSSTOG00000002922	PRPF6	88	85.635	ENSTBEG00000005348	PRPF6	85	85.635	Tupaia_belangeri
ENSSTOG00000002922	PRPF6	100	95.223	ENSTTRG00000013068	PRPF6	100	95.223	Tursiops_truncatus
ENSSTOG00000002922	PRPF6	98	94.028	ENSUMAG00000021631	PRPF6	98	94.245	Ursus_maritimus
ENSSTOG00000002922	PRPF6	100	95.860	ENSVVUG00000014948	PRPF6	100	95.860	Vulpes_vulpes
ENSSTOG00000002922	PRPF6	100	92.781	ENSXETG00000012054	prpf6	97	93.418	Xenopus_tropicalis
ENSSTOG00000002922	PRPF6	100	90.446	ENSXCOG00000008082	prpf6	96	91.295	Xiphophorus_couchianus
ENSSTOG00000002922	PRPF6	100	90.446	ENSXMAG00000015581	prpf6	96	91.295	Xiphophorus_maculatus