EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000003221 (Gene tree)
Gene ID: 101968984
Gene Symbol: TDRD1
Alias: CT41.1
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 37979 bases
Position: chrJH393296.1:4520385-4558363
Accession: 101968984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000026094	TUDOR	PF00567.24	7.6e-127	1	4
ENSSTOP00000026094	TUDOR	PF00567.24	7.6e-127	2	4
ENSSTOP00000026094	TUDOR	PF00567.24	7.6e-127	3	4
ENSSTOP00000026094	TUDOR	PF00567.24	7.6e-127	4	4
ENSSTOP00000002893	TUDOR	PF00567.24	1.1e-125	1	4
ENSSTOP00000002893	TUDOR	PF00567.24	1.1e-125	2	4
ENSSTOP00000002893	TUDOR	PF00567.24	1.1e-125	3	4
ENSSTOP00000002893	TUDOR	PF00567.24	1.1e-125	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000003240	TDRD1-201	3504	XM_005320691	ENSSTOP00000002893	1167 (aa)	XP_005320748	I3M1X1
ENSSTOT00000031111	TDRD1-202	3276	-	ENSSTOP00000026094	1091 (aa)	-	A0A287CXW1

Gene Model

Click here to download ENSSTOG00000003221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000003221	TDRD1	77	30.633	ENSSTOG00000027567	TDRD15	85	30.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000003221	TDRD1	100	91.111	ENSG00000095627	TDRD1	100	89.362	Homo_sapiens
ENSSTOG00000003221	TDRD1	89	33.139	ENSAPOG00000023199	tdrd1	90	33.533	Acanthochromis_polyacanthus
ENSSTOG00000003221	TDRD1	100	89.130	ENSAMEG00000015182	TDRD1	99	89.130	Ailuropoda_melanoleuca
ENSSTOG00000003221	TDRD1	86	34.677	ENSACIG00000010576	tdrd1	89	33.460	Amphilophus_citrinellus
ENSSTOG00000003221	TDRD1	86	36.842	ENSAOCG00000007059	tdrd1	89	36.842	Amphiprion_ocellaris
ENSSTOG00000003221	TDRD1	87	33.106	ENSAPEG00000017049	tdrd1	88	34.016	Amphiprion_percula
ENSSTOG00000003221	TDRD1	86	34.107	ENSATEG00000021627	tdrd1	89	34.107	Anabas_testudineus
ENSSTOG00000003221	TDRD1	87	67.568	ENSAPLG00000012609	TDRD1	98	67.568	Anas_platyrhynchos
ENSSTOG00000003221	TDRD1	98	38.927	ENSACAG00000009854	TDRD1	99	38.927	Anolis_carolinensis
ENSSTOG00000003221	TDRD1	100	80.435	ENSANAG00000035710	TDRD1	99	80.948	Aotus_nancymaae
ENSSTOG00000003221	TDRD1	89	32.410	ENSACLG00000014107	tdrd1	88	32.410	Astatotilapia_calliptera
ENSSTOG00000003221	TDRD1	85	33.571	ENSAMXG00000015146	tdrd1	85	34.332	Astyanax_mexicanus
ENSSTOG00000003221	TDRD1	100	91.304	ENSBTAG00000006855	TDRD1	99	91.304	Bos_taurus
ENSSTOG00000003221	TDRD1	99	86.957	ENSCJAG00000019270	TDRD1	99	86.957	Callithrix_jacchus
ENSSTOG00000003221	TDRD1	99	84.314	ENSCAFG00000011266	TDRD1	100	84.314	Canis_familiaris
ENSSTOG00000003221	TDRD1	99	89.362	ENSCAFG00020012373	TDRD1	100	89.362	Canis_lupus_dingo
ENSSTOG00000003221	TDRD1	99	90.698	ENSCHIG00000012766	TDRD1	99	90.698	Capra_hircus
ENSSTOG00000003221	TDRD1	100	93.023	ENSTSYG00000004935	TDRD1	99	93.023	Carlito_syrichta
ENSSTOG00000003221	TDRD1	99	82.979	ENSCPOG00000004190	TDRD1	100	82.979	Cavia_porcellus
ENSSTOG00000003221	TDRD1	100	87.234	ENSCCAG00000027375	TDRD1	100	87.234	Cebus_capucinus
ENSSTOG00000003221	TDRD1	100	88.889	ENSCATG00000035999	TDRD1	98	88.889	Cercocebus_atys
ENSSTOG00000003221	TDRD1	100	84.783	ENSCLAG00000003935	TDRD1	98	84.783	Chinchilla_lanigera
ENSSTOG00000003221	TDRD1	100	88.889	ENSCSAG00000005071	TDRD1	98	88.889	Chlorocebus_sabaeus
ENSSTOG00000003221	TDRD1	99	88.636	ENSCHOG00000001690	TDRD1	93	88.636	Choloepus_hoffmanni
ENSSTOG00000003221	TDRD1	98	52.137	ENSCPBG00000003780	TDRD1	99	52.137	Chrysemys_picta_bellii
ENSSTOG00000003221	TDRD1	99	82.222	ENSCANG00000035172	TDRD1	99	81.431	Colobus_angolensis_palliatus
ENSSTOG00000003221	TDRD1	97	75.627	ENSCGRG00001004632	Tdrd1	100	75.627	Cricetulus_griseus_chok1gshd
ENSSTOG00000003221	TDRD1	99	74.723	ENSCGRG00000004981	Tdrd1	100	74.723	Cricetulus_griseus_crigri
ENSSTOG00000003221	TDRD1	84	33.692	ENSCSEG00000006983	tdrd1	91	33.694	Cynoglossus_semilaevis
ENSSTOG00000003221	TDRD1	80	31.886	ENSCVAG00000020980	tdrd1	91	31.886	Cyprinodon_variegatus
ENSSTOG00000003221	TDRD1	81	37.500	ENSDARG00000007465	tdrd1	89	36.598	Danio_rerio
ENSSTOG00000003221	TDRD1	99	86.957	ENSDNOG00000012114	TDRD1	98	86.957	Dasypus_novemcinctus
ENSSTOG00000003221	TDRD1	99	80.851	ENSDORG00000009986	Tdrd1	100	80.851	Dipodomys_ordii
ENSSTOG00000003221	TDRD1	89	75.591	ENSETEG00000020143	TDRD1	83	75.591	Echinops_telfairi
ENSSTOG00000003221	TDRD1	100	85.106	ENSEASG00005014802	TDRD1	100	85.106	Equus_asinus_asinus
ENSSTOG00000003221	TDRD1	100	84.783	ENSECAG00000009748	TDRD1	97	84.783	Equus_caballus
ENSSTOG00000003221	TDRD1	100	80.435	ENSEEUG00000010076	TDRD1	99	80.435	Erinaceus_europaeus
ENSSTOG00000003221	TDRD1	87	33.528	ENSELUG00000024364	tdrd1	87	33.528	Esox_lucius
ENSSTOG00000003221	TDRD1	99	88.889	ENSFCAG00000000632	TDRD1	99	88.889	Felis_catus
ENSSTOG00000003221	TDRD1	77	61.538	ENSFALG00000002237	TDRD1	92	61.538	Ficedula_albicollis
ENSSTOG00000003221	TDRD1	99	87.234	ENSFDAG00000013225	TDRD1	99	87.234	Fukomys_damarensis
ENSSTOG00000003221	TDRD1	82	30.196	ENSFHEG00000009203	tdrd1	90	30.196	Fundulus_heteroclitus
ENSSTOG00000003221	TDRD1	72	34.259	ENSGMOG00000016797	-	69	34.259	Gadus_morhua
ENSSTOG00000003221	TDRD1	89	44.939	ENSGALG00000046180	TDRD1	95	51.282	Gallus_gallus
ENSSTOG00000003221	TDRD1	83	34.894	ENSGAFG00000002668	tdrd1	84	34.894	Gambusia_affinis
ENSSTOG00000003221	TDRD1	80	35.330	ENSGACG00000006590	tdrd1	99	35.330	Gasterosteus_aculeatus
ENSSTOG00000003221	TDRD1	100	91.111	ENSGGOG00000004250	TDRD1	98	91.111	Gorilla_gorilla
ENSSTOG00000003221	TDRD1	90	31.964	ENSHBUG00000005216	tdrd1	89	31.964	Haplochromis_burtoni
ENSSTOG00000003221	TDRD1	99	89.362	ENSHGLG00000010877	TDRD1	98	89.362	Heterocephalus_glaber_female
ENSSTOG00000003221	TDRD1	95	81.844	ENSHGLG00100013857	TDRD1	99	81.844	Heterocephalus_glaber_male
ENSSTOG00000003221	TDRD1	82	31.927	ENSHCOG00000002840	tdrd1	85	32.118	Hippocampus_comes
ENSSTOG00000003221	TDRD1	85	34.770	ENSIPUG00000017232	tdrd1	89	35.015	Ictalurus_punctatus
ENSSTOG00000003221	TDRD1	99	78.043	ENSJJAG00000014720	Tdrd1	100	78.383	Jaculus_jaculus
ENSSTOG00000003221	TDRD1	81	35.300	ENSKMAG00000018558	tdrd1	90	35.300	Kryptolebias_marmoratus
ENSSTOG00000003221	TDRD1	91	33.874	ENSLBEG00000004161	tdrd1	87	34.735	Labrus_bergylta
ENSSTOG00000003221	TDRD1	99	42.276	ENSLACG00000011559	TDRD1	100	43.467	Latimeria_chalumnae
ENSSTOG00000003221	TDRD1	86	37.055	ENSLOCG00000012030	tdrd1	100	39.027	Lepisosteus_oculatus
ENSSTOG00000003221	TDRD1	80	81.418	ENSLAFG00000011575	TDRD1	100	81.418	Loxodonta_africana
ENSSTOG00000003221	TDRD1	100	89.130	ENSMFAG00000043487	TDRD1	99	89.130	Macaca_fascicularis
ENSSTOG00000003221	TDRD1	100	88.889	ENSMMUG00000022517	TDRD1	98	88.889	Macaca_mulatta
ENSSTOG00000003221	TDRD1	100	89.130	ENSMNEG00000031108	TDRD1	99	89.130	Macaca_nemestrina
ENSSTOG00000003221	TDRD1	100	88.889	ENSMLEG00000032281	TDRD1	98	88.889	Mandrillus_leucophaeus
ENSSTOG00000003221	TDRD1	85	34.721	ENSMAMG00000015287	tdrd1	93	33.365	Mastacembelus_armatus
ENSSTOG00000003221	TDRD1	89	32.410	ENSMZEG00005025315	tdrd1	88	32.410	Maylandia_zebra
ENSSTOG00000003221	TDRD1	87	56.410	ENSMGAG00000011067	TDRD1	99	56.410	Meleagris_gallopavo
ENSSTOG00000003221	TDRD1	97	71.157	ENSMAUG00000012164	Tdrd1	97	71.319	Mesocricetus_auratus
ENSSTOG00000003221	TDRD1	100	91.489	ENSMICG00000016190	TDRD1	100	91.489	Microcebus_murinus
ENSSTOG00000003221	TDRD1	99	73.854	ENSMOCG00000022360	Tdrd1	100	73.854	Microtus_ochrogaster
ENSSTOG00000003221	TDRD1	83	33.003	ENSMMOG00000014068	tdrd1	90	32.465	Mola_mola
ENSSTOG00000003221	TDRD1	99	80.488	ENSMODG00000009788	TDRD1	99	80.488	Monodelphis_domestica
ENSSTOG00000003221	TDRD1	83	35.558	ENSMALG00000022115	tdrd1	87	35.975	Monopterus_albus
ENSSTOG00000003221	TDRD1	99	79.592	MGP_CAROLIEiJ_G0023095	Tdrd1	99	79.592	Mus_caroli
ENSSTOG00000003221	TDRD1	99	75.510	ENSMUSG00000025081	Tdrd1	99	75.510	Mus_musculus
ENSSTOG00000003221	TDRD1	99	75.510	MGP_PahariEiJ_G0014583	Tdrd1	100	74.809	Mus_pahari
ENSSTOG00000003221	TDRD1	99	79.592	MGP_SPRETEiJ_G0024016	Tdrd1	99	79.592	Mus_spretus
ENSSTOG00000003221	TDRD1	100	93.478	ENSMPUG00000001987	TDRD1	99	93.478	Mustela_putorius_furo
ENSSTOG00000003221	TDRD1	99	82.979	ENSNGAG00000015231	Tdrd1	99	82.979	Nannospalax_galili
ENSSTOG00000003221	TDRD1	83	33.399	ENSNBRG00000017920	tdrd1	85	33.399	Neolamprologus_brichardi
ENSSTOG00000003221	TDRD1	100	84.783	ENSNLEG00000016228	TDRD1	98	84.783	Nomascus_leucogenys
ENSSTOG00000003221	TDRD1	99	75.000	ENSMEUG00000007717	TDRD1	99	75.000	Notamacropus_eugenii
ENSSTOG00000003221	TDRD1	99	82.609	ENSOPRG00000009180	TDRD1	99	82.609	Ochotona_princeps
ENSSTOG00000003221	TDRD1	99	78.413	ENSODEG00000011965	TDRD1	100	78.413	Octodon_degus
ENSSTOG00000003221	TDRD1	90	33.725	ENSONIG00000016382	tdrd1	87	33.300	Oreochromis_niloticus
ENSSTOG00000003221	TDRD1	98	60.870	ENSOANG00000001562	TDRD1	99	60.870	Ornithorhynchus_anatinus
ENSSTOG00000003221	TDRD1	98	87.234	ENSOCUG00000025327	TDRD1	100	87.234	Oryctolagus_cuniculus
ENSSTOG00000003221	TDRD1	84	35.132	ENSORLG00000004833	tdrd1	89	35.132	Oryzias_latipes
ENSSTOG00000003221	TDRD1	85	36.120	ENSORLG00020019231	tdrd1	97	34.937	Oryzias_latipes_hni
ENSSTOG00000003221	TDRD1	85	35.959	ENSORLG00015017184	tdrd1	88	35.172	Oryzias_latipes_hsok
ENSSTOG00000003221	TDRD1	81	35.957	ENSOMEG00000023637	tdrd1	83	34.861	Oryzias_melastigma
ENSSTOG00000003221	TDRD1	100	93.617	ENSOGAG00000001370	TDRD1	100	93.617	Otolemur_garnettii
ENSSTOG00000003221	TDRD1	100	84.783	ENSOARG00000014200	-	99	84.783	Ovis_aries
ENSSTOG00000003221	TDRD1	100	91.111	ENSPPAG00000041621	TDRD1	98	91.111	Pan_paniscus
ENSSTOG00000003221	TDRD1	99	88.889	ENSPPRG00000000191	TDRD1	99	88.889	Panthera_pardus
ENSSTOG00000003221	TDRD1	100	88.889	ENSPTIG00000010264	TDRD1	100	88.889	Panthera_tigris_altaica
ENSSTOG00000003221	TDRD1	100	91.111	ENSPTRG00000002958	TDRD1	98	91.111	Pan_troglodytes
ENSSTOG00000003221	TDRD1	100	88.889	ENSPANG00000020752	TDRD1	98	88.889	Papio_anubis
ENSSTOG00000003221	TDRD1	84	35.300	ENSPKIG00000010586	tdrd1	91	35.300	Paramormyrops_kingsleyae
ENSSTOG00000003221	TDRD1	99	66.667	ENSPSIG00000014655	TDRD1	98	66.667	Pelodiscus_sinensis
ENSSTOG00000003221	TDRD1	82	32.856	ENSPMGG00000018890	tdrd1	99	32.537	Periophthalmus_magnuspinnatus
ENSSTOG00000003221	TDRD1	99	78.261	ENSPEMG00000004582	Tdrd1	99	78.261	Peromyscus_maniculatus_bairdii
ENSSTOG00000003221	TDRD1	69	30.097	ENSPMAG00000004416	-	98	30.097	Petromyzon_marinus
ENSSTOG00000003221	TDRD1	98	85.000	ENSPCIG00000009739	TDRD1	99	85.000	Phascolarctos_cinereus
ENSSTOG00000003221	TDRD1	79	35.419	ENSPFOG00000002145	tdrd1	91	35.419	Poecilia_formosa
ENSSTOG00000003221	TDRD1	87	33.683	ENSPLAG00000010241	tdrd1	91	34.702	Poecilia_latipinna
ENSSTOG00000003221	TDRD1	87	34.934	ENSPMEG00000021893	tdrd1	90	34.934	Poecilia_mexicana
ENSSTOG00000003221	TDRD1	86	33.238	ENSPREG00000022663	tdrd1	89	33.238	Poecilia_reticulata
ENSSTOG00000003221	TDRD1	100	91.111	ENSPPYG00000002671	TDRD1	98	91.111	Pongo_abelii
ENSSTOG00000003221	TDRD1	96	72.637	ENSPCAG00000006692	TDRD1	97	68.690	Procavia_capensis
ENSSTOG00000003221	TDRD1	99	93.478	ENSPCOG00000026619	TDRD1	99	93.478	Propithecus_coquereli
ENSSTOG00000003221	TDRD1	97	81.991	ENSPVAG00000003055	TDRD1	99	80.574	Pteropus_vampyrus
ENSSTOG00000003221	TDRD1	83	33.102	ENSPNYG00000001706	tdrd1	84	33.102	Pundamilia_nyererei
ENSSTOG00000003221	TDRD1	82	35.872	ENSPNAG00000005831	tdrd1	85	36.049	Pygocentrus_nattereri
ENSSTOG00000003221	TDRD1	99	79.592	ENSRNOG00000017064	Tdrd1	99	79.592	Rattus_norvegicus
ENSSTOG00000003221	TDRD1	100	78.662	ENSRBIG00000029668	TDRD1	98	81.250	Rhinopithecus_bieti
ENSSTOG00000003221	TDRD1	100	82.609	ENSRROG00000043379	TDRD1	98	82.609	Rhinopithecus_roxellana
ENSSTOG00000003221	TDRD1	100	82.609	ENSSBOG00000023561	TDRD1	99	82.609	Saimiri_boliviensis_boliviensis
ENSSTOG00000003221	TDRD1	99	85.366	ENSSHAG00000014311	TDRD1	99	85.366	Sarcophilus_harrisii
ENSSTOG00000003221	TDRD1	82	33.536	ENSSFOG00015022020	tdrd1	92	34.620	Scleropages_formosus
ENSSTOG00000003221	TDRD1	82	34.349	ENSSMAG00000019271	tdrd1	91	33.333	Scophthalmus_maximus
ENSSTOG00000003221	TDRD1	86	34.205	ENSSDUG00000022012	tdrd1	94	34.205	Seriola_dumerili
ENSSTOG00000003221	TDRD1	86	33.664	ENSSLDG00000006423	tdrd1	95	33.664	Seriola_lalandi_dorsalis
ENSSTOG00000003221	TDRD1	99	84.783	ENSSARG00000008828	TDRD1	83	84.783	Sorex_araneus
ENSSTOG00000003221	TDRD1	98	46.742	ENSSPUG00000005015	TDRD1	99	46.742	Sphenodon_punctatus
ENSSTOG00000003221	TDRD1	89	32.850	ENSSPAG00000018805	tdrd1	93	31.436	Stegastes_partitus
ENSSTOG00000003221	TDRD1	99	89.796	ENSSSCG00000021075	TDRD1	99	89.796	Sus_scrofa
ENSSTOG00000003221	TDRD1	76	58.974	ENSTGUG00000010905	TDRD1	99	58.974	Taeniopygia_guttata
ENSSTOG00000003221	TDRD1	86	32.637	ENSTRUG00000012142	tdrd1	99	32.102	Takifugu_rubripes
ENSSTOG00000003221	TDRD1	81	44.776	ENSTNIG00000018898	tdrd1	100	33.250	Tetraodon_nigroviridis
ENSSTOG00000003221	TDRD1	100	89.130	ENSTBEG00000014417	-	98	89.130	Tupaia_belangeri
ENSSTOG00000003221	TDRD1	76	86.957	ENSTBEG00000014978	-	55	86.957	Tupaia_belangeri
ENSSTOG00000003221	TDRD1	100	86.957	ENSTTRG00000010147	TDRD1	99	86.957	Tursiops_truncatus
ENSSTOG00000003221	TDRD1	100	93.478	ENSUAMG00000009025	TDRD1	99	93.478	Ursus_americanus
ENSSTOG00000003221	TDRD1	100	93.478	ENSUMAG00000000705	TDRD1	99	93.478	Ursus_maritimus
ENSSTOG00000003221	TDRD1	100	91.304	ENSVPAG00000004000	TDRD1	99	91.304	Vicugna_pacos
ENSSTOG00000003221	TDRD1	100	86.275	ENSVVUG00000009750	TDRD1	100	86.275	Vulpes_vulpes
ENSSTOG00000003221	TDRD1	76	35.942	ENSXCOG00000006412	tdrd1	88	35.979	Xiphophorus_couchianus
ENSSTOG00000003221	TDRD1	84	35.146	ENSXMAG00000008104	tdrd1	91	34.969	Xiphophorus_maculatus