EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000003241 (Gene tree)
Gene ID: 101962892
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 16910 bases
Position: chrJH393469.1:650473-667382
Accession: 101962892
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000002895	RRM_1	PF00076.22	8.3e-29	1	3
ENSSTOP00000002895	RRM_1	PF00076.22	8.3e-29	2	3
ENSSTOP00000002895	RRM_1	PF00076.22	8.3e-29	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000003242	RAVER1-201	3576	XM_005336122	ENSSTOP00000002895	740 (aa)	XP_005336179	I3M1X3

Gene Model

Click here to download ENSSTOG00000003241's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003241's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000003241	RAVER1	100	92.173	ENSG00000161847	RAVER1	100	92.308	Homo_sapiens
ENSSTOG00000003241	RAVER1	100	91.521	ENSAMEG00000011738	RAVER1	98	91.386	Ailuropoda_melanoleuca
ENSSTOG00000003241	RAVER1	77	61.039	ENSAPEG00000010854	raver1	83	61.039	Amphiprion_percula
ENSSTOG00000003241	RAVER1	100	50.926	ENSATEG00000021004	raver1	94	49.802	Anabas_testudineus
ENSSTOG00000003241	RAVER1	84	60.676	ENSACAG00000008386	-	94	58.686	Anolis_carolinensis
ENSSTOG00000003241	RAVER1	100	90.162	ENSANAG00000028226	RAVER1	98	90.836	Aotus_nancymaae
ENSSTOG00000003241	RAVER1	96	51.440	ENSACLG00000018492	raver1	91	51.578	Astatotilapia_calliptera
ENSSTOG00000003241	RAVER1	80	78.333	ENSAMXG00000005132	raver1	87	73.611	Astyanax_mexicanus
ENSSTOG00000003241	RAVER1	100	90.946	ENSBTAG00000015721	RAVER1	97	94.279	Bos_taurus
ENSSTOG00000003241	RAVER1	100	90.836	ENSCJAG00000005671	RAVER1	98	91.509	Callithrix_jacchus
ENSSTOG00000003241	RAVER1	100	90.541	ENSCAFG00000017861	RAVER1	98	90.811	Canis_familiaris
ENSSTOG00000003241	RAVER1	100	90.541	ENSCAFG00020024449	RAVER1	100	90.811	Canis_lupus_dingo
ENSSTOG00000003241	RAVER1	100	89.502	ENSCHIG00000006718	RAVER1	100	89.906	Capra_hircus
ENSSTOG00000003241	RAVER1	91	86.411	ENSTSYG00000027107	RAVER1	100	86.243	Carlito_syrichta
ENSSTOG00000003241	RAVER1	90	88.341	ENSCAPG00000002269	RAVER1	100	89.387	Cavia_aperea
ENSSTOG00000003241	RAVER1	100	89.623	ENSCPOG00000001008	RAVER1	100	91.240	Cavia_porcellus
ENSSTOG00000003241	RAVER1	100	91.768	ENSCCAG00000031723	RAVER1	98	91.903	Cebus_capucinus
ENSSTOG00000003241	RAVER1	100	92.713	ENSCATG00000043863	RAVER1	98	92.848	Cercocebus_atys
ENSSTOG00000003241	RAVER1	100	91.129	ENSCLAG00000009336	RAVER1	100	90.323	Chinchilla_lanigera
ENSSTOG00000003241	RAVER1	100	92.713	ENSCSAG00000007317	RAVER1	84	92.982	Chlorocebus_sabaeus
ENSSTOG00000003241	RAVER1	96	63.049	ENSCPBG00000005349	-	96	62.016	Chrysemys_picta_bellii
ENSSTOG00000003241	RAVER1	100	92.713	ENSCANG00000008337	RAVER1	98	92.848	Colobus_angolensis_palliatus
ENSSTOG00000003241	RAVER1	100	90.591	ENSCGRG00001013260	-	100	91.129	Cricetulus_griseus_chok1gshd
ENSSTOG00000003241	RAVER1	100	90.591	ENSCGRG00000015138	-	100	91.129	Cricetulus_griseus_crigri
ENSSTOG00000003241	RAVER1	99	48.999	ENSCSEG00000021092	raver1	79	78.846	Cynoglossus_semilaevis
ENSSTOG00000003241	RAVER1	98	50.403	ENSCVAG00000013971	raver1	93	49.074	Cyprinodon_variegatus
ENSSTOG00000003241	RAVER1	67	58.283	ENSDARG00000052617	raver1	93	50.541	Danio_rerio
ENSSTOG00000003241	RAVER1	100	84.016	ENSDORG00000010106	-	100	83.355	Dipodomys_ordii
ENSSTOG00000003241	RAVER1	72	71.014	ENSETEG00000008201	-	74	88.710	Echinops_telfairi
ENSSTOG00000003241	RAVER1	66	95.309	ENSEASG00005010544	-	90	91.435	Equus_asinus_asinus
ENSSTOG00000003241	RAVER1	100	93.674	ENSECAG00000024966	RAVER1	98	93.809	Equus_caballus
ENSSTOG00000003241	RAVER1	98	52.710	ENSELUG00000023287	raver1	93	52.044	Esox_lucius
ENSSTOG00000003241	RAVER1	100	93.271	ENSFCAG00000009435	RAVER1	98	93.001	Felis_catus
ENSSTOG00000003241	RAVER1	100	89.919	ENSFDAG00000015113	RAVER1	100	90.323	Fukomys_damarensis
ENSSTOG00000003241	RAVER1	82	60.896	ENSGMOG00000003649	raver1	80	60.692	Gadus_morhua
ENSSTOG00000003241	RAVER1	66	45.309	ENSGALG00000050608	-	53	44.444	Gallus_gallus
ENSSTOG00000003241	RAVER1	100	51.523	ENSGAFG00000015944	raver1	81	58.755	Gambusia_affinis
ENSSTOG00000003241	RAVER1	99	50.067	ENSGACG00000013818	raver1	99	49.738	Gasterosteus_aculeatus
ENSSTOG00000003241	RAVER1	96	64.209	ENSGAGG00000011748	-	96	76.944	Gopherus_agassizii
ENSSTOG00000003241	RAVER1	100	91.903	ENSGGOG00000006015	RAVER1	98	92.038	Gorilla_gorilla
ENSSTOG00000003241	RAVER1	96	51.105	ENSHBUG00000021210	raver1	91	50.954	Haplochromis_burtoni
ENSSTOG00000003241	RAVER1	100	90.591	ENSHGLG00000015460	RAVER1	100	89.651	Heterocephalus_glaber_female
ENSSTOG00000003241	RAVER1	100	90.591	ENSHGLG00100000812	RAVER1	100	89.651	Heterocephalus_glaber_male
ENSSTOG00000003241	RAVER1	98	50.612	ENSHCOG00000000449	raver1	91	50.479	Hippocampus_comes
ENSSTOG00000003241	RAVER1	98	51.957	ENSIPUG00000013153	raver1	84	59.144	Ictalurus_punctatus
ENSSTOG00000003241	RAVER1	100	91.801	ENSJJAG00000018219	-	100	90.995	Jaculus_jaculus
ENSSTOG00000003241	RAVER1	98	51.552	ENSKMAG00000017355	raver1	93	50.531	Kryptolebias_marmoratus
ENSSTOG00000003241	RAVER1	68	59.055	ENSLBEG00000008268	raver1	70	58.546	Labrus_bergylta
ENSSTOG00000003241	RAVER1	90	60.086	ENSLACG00000005809	-	99	60.658	Latimeria_chalumnae
ENSSTOG00000003241	RAVER1	96	55.302	ENSLOCG00000007500	raver1	94	53.403	Lepisosteus_oculatus
ENSSTOG00000003241	RAVER1	100	91.263	ENSLAFG00000003664	-	97	95.000	Loxodonta_africana
ENSSTOG00000003241	RAVER1	100	92.308	ENSMFAG00000037977	RAVER1	98	92.443	Macaca_fascicularis
ENSSTOG00000003241	RAVER1	100	92.578	ENSMMUG00000014897	RAVER1	98	92.713	Macaca_mulatta
ENSSTOG00000003241	RAVER1	100	92.578	ENSMNEG00000028390	RAVER1	98	92.713	Macaca_nemestrina
ENSSTOG00000003241	RAVER1	100	92.443	ENSMLEG00000041959	RAVER1	98	92.578	Mandrillus_leucophaeus
ENSSTOG00000003241	RAVER1	75	77.358	ENSMAMG00000012059	raver1	82	58.513	Mastacembelus_armatus
ENSSTOG00000003241	RAVER1	66	60.861	ENSMZEG00005019002	raver1	91	51.857	Maylandia_zebra
ENSSTOG00000003241	RAVER1	100	90.323	ENSMAUG00000017948	-	100	90.860	Mesocricetus_auratus
ENSSTOG00000003241	RAVER1	99	91.204	ENSMICG00000010326	RAVER1	99	91.610	Microcebus_murinus
ENSSTOG00000003241	RAVER1	100	90.860	ENSMOCG00000015553	-	100	90.323	Microtus_ochrogaster
ENSSTOG00000003241	RAVER1	98	50.815	ENSMMOG00000012093	raver1	93	49.933	Mola_mola
ENSSTOG00000003241	RAVER1	97	75.900	ENSMODG00000005584	-	89	75.900	Monodelphis_domestica
ENSSTOG00000003241	RAVER1	98	50.740	ENSMALG00000016569	raver1	82	58.090	Monopterus_albus
ENSSTOG00000003241	RAVER1	100	88.904	MGP_CAROLIEiJ_G0031860	-	100	89.439	Mus_caroli
ENSSTOG00000003241	RAVER1	100	89.171	ENSMUSG00000010205	Raver1	100	89.706	Mus_musculus
ENSSTOG00000003241	RAVER1	100	87.766	MGP_PahariEiJ_G0014726	-	100	89.229	Mus_pahari
ENSSTOG00000003241	RAVER1	100	89.037	MGP_SPRETEiJ_G0032984	-	100	89.572	Mus_spretus
ENSSTOG00000003241	RAVER1	100	92.598	ENSMPUG00000006712	RAVER1	98	92.463	Mustela_putorius_furo
ENSSTOG00000003241	RAVER1	100	89.865	ENSMLUG00000012328	RAVER1	100	90.135	Myotis_lucifugus
ENSSTOG00000003241	RAVER1	100	89.609	ENSNGAG00000001260	-	100	89.609	Nannospalax_galili
ENSSTOG00000003241	RAVER1	96	45.267	ENSNBRG00000010139	raver1	65	51.509	Neolamprologus_brichardi
ENSSTOG00000003241	RAVER1	100	91.903	ENSNLEG00000012181	RAVER1	98	92.038	Nomascus_leucogenys
ENSSTOG00000003241	RAVER1	90	74.516	ENSMEUG00000003281	-	100	73.739	Notamacropus_eugenii
ENSSTOG00000003241	RAVER1	100	90.860	ENSODEG00000016260	RAVER1	100	90.188	Octodon_degus
ENSSTOG00000003241	RAVER1	96	52.162	ENSONIG00000001559	raver1	99	51.657	Oreochromis_niloticus
ENSSTOG00000003241	RAVER1	100	85.811	ENSOCUG00000020918	RAVER1	100	83.087	Oryctolagus_cuniculus
ENSSTOG00000003241	RAVER1	68	67.160	ENSORLG00000005458	raver1	68	67.160	Oryzias_latipes
ENSSTOG00000003241	RAVER1	68	66.914	ENSORLG00020004392	raver1	68	66.914	Oryzias_latipes_hni
ENSSTOG00000003241	RAVER1	68	66.667	ENSORLG00015017222	raver1	68	66.667	Oryzias_latipes_hsok
ENSSTOG00000003241	RAVER1	61	81.633	ENSOMEG00000023956	raver1	67	81.633	Oryzias_melastigma
ENSSTOG00000003241	RAVER1	100	92.703	ENSOGAG00000011071	RAVER1	98	91.892	Otolemur_garnettii
ENSSTOG00000003241	RAVER1	100	87.200	ENSOARG00000015886	RAVER1	98	88.560	Ovis_aries
ENSSTOG00000003241	RAVER1	100	92.173	ENSPPAG00000002611	RAVER1	98	92.308	Pan_paniscus
ENSSTOG00000003241	RAVER1	100	93.674	ENSPPRG00000009912	RAVER1	98	93.405	Panthera_pardus
ENSSTOG00000003241	RAVER1	100	92.173	ENSPTRG00000010466	RAVER1	98	92.308	Pan_troglodytes
ENSSTOG00000003241	RAVER1	100	92.578	ENSPANG00000004122	RAVER1	98	92.713	Papio_anubis
ENSSTOG00000003241	RAVER1	100	90.336	ENSPEMG00000016411	-	100	91.007	Peromyscus_maniculatus_bairdii
ENSSTOG00000003241	RAVER1	100	76.841	ENSPCIG00000018695	-	99	80.132	Phascolarctos_cinereus
ENSSTOG00000003241	RAVER1	98	51.733	ENSPFOG00000007016	raver1	93	50.335	Poecilia_formosa
ENSSTOG00000003241	RAVER1	55	80.000	ENSPLAG00000020793	raver1	76	80.000	Poecilia_latipinna
ENSSTOG00000003241	RAVER1	98	52.362	ENSPMEG00000011220	raver1	93	50.809	Poecilia_mexicana
ENSSTOG00000003241	RAVER1	73	88.372	ENSPREG00000006864	raver1	78	88.372	Poecilia_reticulata
ENSSTOG00000003241	RAVER1	100	91.351	ENSPPYG00000010514	RAVER1	84	91.351	Pongo_abelii
ENSSTOG00000003241	RAVER1	100	92.483	ENSPCOG00000026605	RAVER1	98	92.081	Propithecus_coquereli
ENSSTOG00000003241	RAVER1	100	92.568	ENSPVAG00000003689	RAVER1	100	91.486	Pteropus_vampyrus
ENSSTOG00000003241	RAVER1	54	65.500	ENSPNYG00000013284	raver1	56	67.000	Pundamilia_nyererei
ENSSTOG00000003241	RAVER1	96	51.448	ENSPNAG00000015476	raver1	67	59.486	Pygocentrus_nattereri
ENSSTOG00000003241	RAVER1	100	89.037	ENSRNOG00000020710	Raver1	100	89.572	Rattus_norvegicus
ENSSTOG00000003241	RAVER1	100	92.443	ENSRBIG00000034702	RAVER1	98	92.578	Rhinopithecus_bieti
ENSSTOG00000003241	RAVER1	100	89.609	ENSRROG00000031186	RAVER1	98	89.339	Rhinopithecus_roxellana
ENSSTOG00000003241	RAVER1	100	88.529	ENSSBOG00000023423	RAVER1	98	88.529	Saimiri_boliviensis_boliviensis
ENSSTOG00000003241	RAVER1	90	76.593	ENSSHAG00000008181	-	90	76.148	Sarcophilus_harrisii
ENSSTOG00000003241	RAVER1	96	49.051	ENSSDUG00000021063	raver1	91	51.691	Seriola_dumerili
ENSSTOG00000003241	RAVER1	66	59.600	ENSSLDG00000014505	raver1	91	50.820	Seriola_lalandi_dorsalis
ENSSTOG00000003241	RAVER1	78	59.524	ENSSPAG00000000688	raver1	82	55.970	Stegastes_partitus
ENSSTOG00000003241	RAVER1	100	94.062	ENSSSCG00000013650	-	98	94.197	Sus_scrofa
ENSSTOG00000003241	RAVER1	98	50.336	ENSTRUG00000025641	raver1	78	58.537	Takifugu_rubripes
ENSSTOG00000003241	RAVER1	100	92.838	ENSTTRG00000009552	RAVER1	100	92.703	Tursiops_truncatus
ENSSTOG00000003241	RAVER1	100	93.674	ENSUAMG00000020385	RAVER1	98	93.540	Ursus_americanus
ENSSTOG00000003241	RAVER1	100	90.541	ENSVVUG00000028976	RAVER1	98	90.811	Vulpes_vulpes
ENSSTOG00000003241	RAVER1	100	55.774	ENSXETG00000011622	raver1	100	54.593	Xenopus_tropicalis
ENSSTOG00000003241	RAVER1	98	51.421	ENSXCOG00000016368	raver1	93	50.068	Xiphophorus_couchianus
ENSSTOG00000003241	RAVER1	98	51.150	ENSXMAG00000000217	raver1	93	49.932	Xiphophorus_maculatus