EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000003487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 35204 bases
Position: chrJH393504.1:2492102-2527305
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000003131	zf-CCCH	PF00642.24	5.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000022563	-	432	-	ENSSTOP00000023797	143 (aa)	-	I3NHF0
ENSSTOT00000003497	-	2115	-	ENSSTOP00000003131	704 (aa)	-	I3M2E0
ENSSTOT00000038786	-	723	XM_013364055	ENSSTOP00000027902	240 (aa)	-	A0A287D301

Gene Model

Click here to download ENSSTOG00000003487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000003487	-	87	78.397	ENSSTOG00000013344	UNK	78	78.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000003487	-	100	85.149	ENSG00000059145	UNKL	100	85.965	Homo_sapiens
ENSSTOG00000003487	-	94	90.034	ENSAPOG00000023784	unkl	81	90.034	Acanthochromis_polyacanthus
ENSSTOG00000003487	-	100	65.871	ENSACIG00000023268	unkl	97	66.341	Amphilophus_citrinellus
ENSSTOG00000003487	-	94	89.691	ENSAOCG00000022845	unkl	81	89.691	Amphiprion_ocellaris
ENSSTOG00000003487	-	94	89.691	ENSAPEG00000011709	unkl	81	89.691	Amphiprion_percula
ENSSTOG00000003487	-	94	89.347	ENSATEG00000004328	unkl	81	89.347	Anabas_testudineus
ENSSTOG00000003487	-	88	87.543	ENSAPLG00000016186	-	80	87.543	Anas_platyrhynchos
ENSSTOG00000003487	-	100	84.866	ENSANAG00000021942	-	100	85.149	Aotus_nancymaae
ENSSTOG00000003487	-	94	88.660	ENSACLG00000006189	unkl	81	88.660	Astatotilapia_calliptera
ENSSTOG00000003487	-	99	85.079	ENSAMXG00000007890	unkl	82	90.034	Astyanax_mexicanus
ENSSTOG00000003487	-	100	83.310	ENSBTAG00000014126	-	96	83.310	Bos_taurus
ENSSTOG00000003487	-	100	79.915	ENSCJAG00000013151	-	96	80.198	Callithrix_jacchus
ENSSTOG00000003487	-	100	81.946	ENSCAFG00000019581	UNKL	97	82.087	Canis_familiaris
ENSSTOG00000003487	-	100	77.356	ENSCAFG00020001284	-	96	77.356	Canis_lupus_dingo
ENSSTOG00000003487	-	100	79.858	ENSTSYG00000033619	-	98	79.858	Carlito_syrichta
ENSSTOG00000003487	-	90	78.997	ENSCAPG00000014785	-	93	80.251	Cavia_aperea
ENSSTOG00000003487	-	100	87.801	ENSCPOG00000011846	-	96	88.936	Cavia_porcellus
ENSSTOG00000003487	-	100	85.997	ENSCCAG00000022808	-	96	86.280	Cebus_capucinus
ENSSTOG00000003487	-	100	85.997	ENSCATG00000033183	-	96	86.280	Cercocebus_atys
ENSSTOG00000003487	-	100	88.652	ENSCLAG00000015420	-	100	89.787	Chinchilla_lanigera
ENSSTOG00000003487	-	100	85.856	ENSCSAG00000011709	-	96	86.139	Chlorocebus_sabaeus
ENSSTOG00000003487	-	99	88.850	ENSCPBG00000002794	-	97	78.761	Chrysemys_picta_bellii
ENSSTOG00000003487	-	90	79.592	ENSCANG00000036315	-	100	79.906	Colobus_angolensis_palliatus
ENSSTOG00000003487	-	100	89.377	ENSCGRG00001014153	Unkl	96	89.660	Cricetulus_griseus_chok1gshd
ENSSTOG00000003487	-	100	89.377	ENSCGRG00000010384	Unkl	100	89.660	Cricetulus_griseus_crigri
ENSSTOG00000003487	-	93	90.244	ENSCSEG00000010415	unkl	81	90.244	Cynoglossus_semilaevis
ENSSTOG00000003487	-	94	89.003	ENSCVAG00000015910	unkl	83	84.615	Cyprinodon_variegatus
ENSSTOG00000003487	-	100	73.077	ENSDARG00000037838	unkl	82	89.691	Danio_rerio
ENSSTOG00000003487	-	56	71.465	ENSDNOG00000045552	-	85	70.545	Dasypus_novemcinctus
ENSSTOG00000003487	-	90	76.489	ENSDORG00000015663	Unkl	93	77.846	Dipodomys_ordii
ENSSTOG00000003487	-	100	82.885	ENSEASG00005000274	-	96	83.168	Equus_asinus_asinus
ENSSTOG00000003487	-	100	81.612	ENSECAG00000010641	UNKL	100	80.987	Equus_caballus
ENSSTOG00000003487	-	94	90.592	ENSELUG00000021446	unkl	81	90.592	Esox_lucius
ENSSTOG00000003487	-	100	77.086	ENSFCAG00000010643	-	96	76.803	Felis_catus
ENSSTOG00000003487	-	100	66.102	ENSFHEG00000002811	unkl	97	66.667	Fundulus_heteroclitus
ENSSTOG00000003487	-	99	82.462	ENSGALG00000043765	-	94	82.462	Gallus_gallus
ENSSTOG00000003487	-	93	89.547	ENSGAFG00000017960	unkl	81	88.660	Gambusia_affinis
ENSSTOG00000003487	-	99	78.171	ENSGAGG00000023664	-	94	78.171	Gopherus_agassizii
ENSSTOG00000003487	-	100	84.767	ENSGGOG00000014915	-	96	85.755	Gorilla_gorilla
ENSSTOG00000003487	-	94	88.660	ENSHBUG00000003486	unkl	83	88.660	Haplochromis_burtoni
ENSSTOG00000003487	-	100	88.085	ENSHGLG00000001586	-	97	89.220	Heterocephalus_glaber_female
ENSSTOG00000003487	-	100	88.227	ENSHGLG00100007463	-	100	89.362	Heterocephalus_glaber_male
ENSSTOG00000003487	-	100	64.566	ENSHCOG00000015734	unkl	97	64.755	Hippocampus_comes
ENSSTOG00000003487	-	99	84.762	ENSIPUG00000019510	unkl	82	89.691	Ictalurus_punctatus
ENSSTOG00000003487	-	100	85.694	ENSJJAG00000011047	Unkl	97	85.836	Jaculus_jaculus
ENSSTOG00000003487	-	97	89.003	ENSKMAG00000018810	unkl	81	89.003	Kryptolebias_marmoratus
ENSSTOG00000003487	-	100	65.254	ENSLBEG00000023912	unkl	97	65.254	Labrus_bergylta
ENSSTOG00000003487	-	83	93.119	ENSLACG00000009285	unkl	80	93.119	Latimeria_chalumnae
ENSSTOG00000003487	-	93	89.895	ENSLOCG00000003648	unkl	81	89.895	Lepisosteus_oculatus
ENSSTOG00000003487	-	100	78.390	ENSLAFG00000018262	-	96	78.390	Loxodonta_africana
ENSSTOG00000003487	-	100	85.149	ENSMFAG00000000632	-	96	85.431	Macaca_fascicularis
ENSSTOG00000003487	-	100	81.127	ENSMMUG00000012440	-	96	80.845	Macaca_mulatta
ENSSTOG00000003487	-	100	81.013	ENSMNEG00000036131	-	96	81.013	Macaca_nemestrina
ENSSTOG00000003487	-	100	76.738	ENSMLEG00000037946	-	100	75.745	Mandrillus_leucophaeus
ENSSTOG00000003487	-	94	89.347	ENSMAMG00000002709	unkl	81	89.347	Mastacembelus_armatus
ENSSTOG00000003487	-	94	88.660	ENSMZEG00005022469	unkl	81	88.660	Maylandia_zebra
ENSSTOG00000003487	-	99	53.208	ENSMGAG00000006920	UNKL	99	52.978	Meleagris_gallopavo
ENSSTOG00000003487	-	100	89.518	ENSMAUG00000016281	Unkl	96	89.660	Mesocricetus_auratus
ENSSTOG00000003487	-	100	81.586	ENSMICG00000007141	-	96	81.418	Microcebus_murinus
ENSSTOG00000003487	-	100	88.385	ENSMOCG00000011424	Unkl	96	88.669	Microtus_ochrogaster
ENSSTOG00000003487	-	100	66.099	ENSMMOG00000014848	unkl	97	66.241	Mola_mola
ENSSTOG00000003487	-	90	80.669	ENSMODG00000016188	-	91	80.669	Monodelphis_domestica
ENSSTOG00000003487	-	94	89.003	ENSMALG00000020837	unkl	82	89.003	Monopterus_albus
ENSSTOG00000003487	-	100	88.385	MGP_CAROLIEiJ_G0021225	Unkl	100	86.447	Mus_caroli
ENSSTOG00000003487	-	100	88.244	ENSMUSG00000015127	Unkl	100	86.264	Mus_musculus
ENSSTOG00000003487	-	100	89.235	MGP_PahariEiJ_G0023543	Unkl	96	89.235	Mus_pahari
ENSSTOG00000003487	-	100	88.244	MGP_SPRETEiJ_G0022136	Unkl	100	86.264	Mus_spretus
ENSSTOG00000003487	-	91	77.589	ENSMPUG00000015653	-	98	77.743	Mustela_putorius_furo
ENSSTOG00000003487	-	87	80.429	ENSMLUG00000011207	-	90	80.429	Myotis_lucifugus
ENSSTOG00000003487	-	100	89.377	ENSNGAG00000002821	Unkl	96	89.377	Nannospalax_galili
ENSSTOG00000003487	-	94	88.660	ENSNBRG00000015104	unkl	82	88.660	Neolamprologus_brichardi
ENSSTOG00000003487	-	99	85.248	ENSNLEG00000008624	-	98	86.241	Nomascus_leucogenys
ENSSTOG00000003487	-	100	86.809	ENSODEG00000017747	-	96	87.943	Octodon_degus
ENSSTOG00000003487	-	93	89.860	ENSONIG00000001411	unkl	85	81.288	Oreochromis_niloticus
ENSSTOG00000003487	-	97	90.034	ENSORLG00000005070	unkl	81	90.034	Oryzias_latipes
ENSSTOG00000003487	-	97	90.034	ENSORLG00020005376	unkl	81	90.034	Oryzias_latipes_hni
ENSSTOG00000003487	-	97	89.691	ENSORLG00015018545	unkl	81	89.691	Oryzias_latipes_hsok
ENSSTOG00000003487	-	97	90.034	ENSOMEG00000023985	unkl	82	90.034	Oryzias_melastigma
ENSSTOG00000003487	-	100	70.547	ENSOARG00000015636	-	96	70.407	Ovis_aries
ENSSTOG00000003487	-	90	79.435	ENSPPAG00000043365	-	100	79.310	Pan_paniscus
ENSSTOG00000003487	-	100	76.869	ENSPPRG00000018472	-	99	77.591	Panthera_pardus
ENSSTOG00000003487	-	81	76.857	ENSPTIG00000000863	-	90	75.211	Panthera_tigris_altaica
ENSSTOG00000003487	-	100	85.290	ENSPTRG00000007591	UNKL	96	86.280	Pan_troglodytes
ENSSTOG00000003487	-	100	85.573	ENSPANG00000015754	-	96	85.997	Papio_anubis
ENSSTOG00000003487	-	100	59.892	ENSPKIG00000006764	-	97	59.214	Paramormyrops_kingsleyae
ENSSTOG00000003487	-	93	89.003	ENSPKIG00000002101	unkl	81	89.003	Paramormyrops_kingsleyae
ENSSTOG00000003487	-	60	57.713	ENSPSIG00000011268	-	88	56.777	Pelodiscus_sinensis
ENSSTOG00000003487	-	100	65.363	ENSPMGG00000020856	unkl	97	65.363	Periophthalmus_magnuspinnatus
ENSSTOG00000003487	-	100	88.810	ENSPEMG00000008937	Unkl	96	89.093	Peromyscus_maniculatus_bairdii
ENSSTOG00000003487	-	100	82.301	ENSPCIG00000015633	-	94	82.301	Phascolarctos_cinereus
ENSSTOG00000003487	-	94	88.660	ENSPFOG00000010836	unkl	83	84.295	Poecilia_formosa
ENSSTOG00000003487	-	100	70.171	ENSPLAG00000002294	unkl	83	84.295	Poecilia_latipinna
ENSSTOG00000003487	-	94	88.660	ENSPMEG00000019000	unkl	83	84.295	Poecilia_mexicana
ENSSTOG00000003487	-	94	88.660	ENSPREG00000007918	unkl	81	88.660	Poecilia_reticulata
ENSSTOG00000003487	-	90	84.562	ENSPPYG00000006950	-	100	83.296	Pongo_abelii
ENSSTOG00000003487	-	56	92.754	ENSPCAG00000017060	-	83	92.754	Procavia_capensis
ENSSTOG00000003487	-	100	86.667	ENSPCOG00000017889	-	96	86.667	Propithecus_coquereli
ENSSTOG00000003487	-	56	81.433	ENSPVAG00000016649	-	84	81.433	Pteropus_vampyrus
ENSSTOG00000003487	-	94	88.660	ENSPNYG00000008111	unkl	81	88.660	Pundamilia_nyererei
ENSSTOG00000003487	-	100	75.067	ENSPNAG00000010422	unkl	85	85.079	Pygocentrus_nattereri
ENSSTOG00000003487	-	100	89.093	ENSRNOG00000054605	Unkl	96	89.377	Rattus_norvegicus
ENSSTOG00000003487	-	100	73.699	ENSRBIG00000040235	-	96	72.587	Rhinopithecus_bieti
ENSSTOG00000003487	-	100	85.997	ENSRROG00000029341	-	100	86.280	Rhinopithecus_roxellana
ENSSTOG00000003487	-	100	85.290	ENSSBOG00000031173	-	100	86.421	Saimiri_boliviensis_boliviensis
ENSSTOG00000003487	-	100	82.301	ENSSHAG00000008411	-	96	82.301	Sarcophilus_harrisii
ENSSTOG00000003487	-	85	86.147	ENSSFOG00015018904	unkl	77	86.147	Scleropages_formosus
ENSSTOG00000003487	-	100	65.266	ENSSMAG00000005106	unkl	97	65.546	Scophthalmus_maximus
ENSSTOG00000003487	-	94	89.691	ENSSDUG00000019045	unkl	82	89.691	Seriola_dumerili
ENSSTOG00000003487	-	94	89.691	ENSSLDG00000010672	unkl	81	89.691	Seriola_lalandi_dorsalis
ENSSTOG00000003487	-	93	78.761	ENSSPUG00000009763	-	88	78.761	Sphenodon_punctatus
ENSSTOG00000003487	-	97	90.034	ENSSPAG00000017109	unkl	84	90.034	Stegastes_partitus
ENSSTOG00000003487	-	100	82.917	ENSSSCG00000022963	-	97	83.333	Sus_scrofa
ENSSTOG00000003487	-	93	90.244	ENSTRUG00000012086	unkl	80	90.244	Takifugu_rubripes
ENSSTOG00000003487	-	92	91.228	ENSTNIG00000018588	unkl	81	91.228	Tetraodon_nigroviridis
ENSSTOG00000003487	-	56	97.101	ENSTTRG00000011985	-	71	97.101	Tursiops_truncatus
ENSSTOG00000003487	-	77	95.238	ENSVVUG00000011182	-	81	95.238	Vulpes_vulpes
ENSSTOG00000003487	-	100	68.835	ENSXETG00000021599	unkl	97	68.835	Xenopus_tropicalis
ENSSTOG00000003487	-	100	64.543	ENSXCOG00000016491	unkl	97	64.601	Xiphophorus_couchianus
ENSSTOG00000003487	-	100	62.908	ENSXMAG00000009520	unkl	97	63.085	Xiphophorus_maculatus