EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000003720 (Gene tree)
Gene ID: 101955401
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 48785 bases
Position: chrJH393380.1:2705096-2753880
Accession: 101955401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000003350	DUF1604	PF07713.13	1.1e-35	1	1
ENSSTOP00000003350	G-patch	PF01585.23	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000003738	GPATCH1-201	2784	XM_005330635	ENSSTOP00000003350	927 (aa)	XP_005330692	I3M2V6

Gene Model

Click here to download ENSSTOG00000003720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000003720	GPATCH1	100	87.901	ENSG00000076650	GPATCH1	100	87.901	Homo_sapiens
ENSSTOG00000003720	GPATCH1	100	88.103	ENSAMEG00000015575	GPATCH1	100	88.103	Ailuropoda_melanoleuca
ENSSTOG00000003720	GPATCH1	81	69.061	ENSAOCG00000006668	gpatch1	77	69.061	Amphiprion_ocellaris
ENSSTOG00000003720	GPATCH1	81	54.368	ENSAPEG00000000026	gpatch1	90	50.463	Amphiprion_percula
ENSSTOG00000003720	GPATCH1	89	50.623	ENSATEG00000014494	gpatch1	90	51.129	Anabas_testudineus
ENSSTOG00000003720	GPATCH1	90	60.831	ENSAPLG00000007584	GPATCH1	95	61.208	Anas_platyrhynchos
ENSSTOG00000003720	GPATCH1	100	87.580	ENSANAG00000027002	GPATCH1	100	87.580	Aotus_nancymaae
ENSSTOG00000003720	GPATCH1	81	53.426	ENSACLG00000024740	gpatch1	82	52.826	Astatotilapia_calliptera
ENSSTOG00000003720	GPATCH1	91	51.900	ENSAMXG00000020177	gpatch1	97	51.251	Astyanax_mexicanus
ENSSTOG00000003720	GPATCH1	91	86.235	ENSBTAG00000000721	GPATCH1	100	82.101	Bos_taurus
ENSSTOG00000003720	GPATCH1	68	30.441	WBGene00011109	R07E5.1	68	30.441	Caenorhabditis_elegans
ENSSTOG00000003720	GPATCH1	100	86.831	ENSCJAG00000000684	GPATCH1	100	86.831	Callithrix_jacchus
ENSSTOG00000003720	GPATCH1	100	87.152	ENSCAFG00000007457	GPATCH1	84	87.152	Canis_familiaris
ENSSTOG00000003720	GPATCH1	94	86.857	ENSCAFG00020019731	GPATCH1	91	86.737	Canis_lupus_dingo
ENSSTOG00000003720	GPATCH1	99	86.580	ENSCHIG00000019626	GPATCH1	100	82.851	Capra_hircus
ENSSTOG00000003720	GPATCH1	97	79.956	ENSCAPG00000008827	GPATCH1	100	80.748	Cavia_aperea
ENSSTOG00000003720	GPATCH1	100	81.624	ENSCPOG00000024477	GPATCH1	100	82.799	Cavia_porcellus
ENSSTOG00000003720	GPATCH1	100	87.152	ENSCCAG00000024676	GPATCH1	100	87.152	Cebus_capucinus
ENSSTOG00000003720	GPATCH1	100	87.687	ENSCATG00000043637	GPATCH1	100	87.687	Cercocebus_atys
ENSSTOG00000003720	GPATCH1	96	81.951	ENSCLAG00000003395	-	100	82.458	Chinchilla_lanigera
ENSSTOG00000003720	GPATCH1	100	85.561	ENSCSAG00000004743	GPATCH1	100	85.546	Chlorocebus_sabaeus
ENSSTOG00000003720	GPATCH1	93	75.723	ENSCHOG00000012865	GPATCH1	100	75.723	Choloepus_hoffmanni
ENSSTOG00000003720	GPATCH1	79	69.672	ENSCPBG00000000666	GPATCH1	92	69.672	Chrysemys_picta_bellii
ENSSTOG00000003720	GPATCH1	81	34.710	ENSCING00000012518	-	89	34.078	Ciona_intestinalis
ENSSTOG00000003720	GPATCH1	93	84.767	ENSCANG00000012540	GPATCH1	100	84.767	Colobus_angolensis_palliatus
ENSSTOG00000003720	GPATCH1	97	81.758	ENSCGRG00001016736	Gpatch1	100	81.758	Cricetulus_griseus_chok1gshd
ENSSTOG00000003720	GPATCH1	93	68.009	ENSCGRG00000005069	Gpatch1	90	67.098	Cricetulus_griseus_crigri
ENSSTOG00000003720	GPATCH1	82	48.560	ENSCSEG00000019456	-	84	60.550	Cynoglossus_semilaevis
ENSSTOG00000003720	GPATCH1	81	54.224	ENSDARG00000033418	gpatch1	92	51.160	Danio_rerio
ENSSTOG00000003720	GPATCH1	91	85.094	ENSDNOG00000005291	GPATCH1	95	84.977	Dasypus_novemcinctus
ENSSTOG00000003720	GPATCH1	94	79.152	ENSDORG00000012546	Gpatch1	95	79.059	Dipodomys_ordii
ENSSTOG00000003720	GPATCH1	99	75.676	ENSETEG00000003626	GPATCH1	92	75.967	Echinops_telfairi
ENSSTOG00000003720	GPATCH1	94	36.017	ENSEBUG00000011286	gpatch1	91	37.514	Eptatretus_burgeri
ENSSTOG00000003720	GPATCH1	99	83.333	ENSEASG00005021162	GPATCH1	93	86.228	Equus_asinus_asinus
ENSSTOG00000003720	GPATCH1	94	86.384	ENSECAG00000022743	GPATCH1	88	86.134	Equus_caballus
ENSSTOG00000003720	GPATCH1	78	76.961	ENSEEUG00000012925	GPATCH1	78	76.961	Erinaceus_europaeus
ENSSTOG00000003720	GPATCH1	99	47.848	ENSELUG00000018195	gpatch1	90	48.709	Esox_lucius
ENSSTOG00000003720	GPATCH1	100	87.245	ENSFCAG00000014917	GPATCH1	100	87.245	Felis_catus
ENSSTOG00000003720	GPATCH1	99	62.986	ENSFALG00000007821	GPATCH1	89	64.169	Ficedula_albicollis
ENSSTOG00000003720	GPATCH1	96	81.899	ENSFDAG00000003871	GPATCH1	99	82.346	Fukomys_damarensis
ENSSTOG00000003720	GPATCH1	75	50.116	ENSGMOG00000003830	gpatch1	95	49.420	Gadus_morhua
ENSSTOG00000003720	GPATCH1	93	63.235	ENSGALG00000004839	GPATCH1	94	62.587	Gallus_gallus
ENSSTOG00000003720	GPATCH1	91	48.840	ENSGACG00000017544	gpatch1	94	48.621	Gasterosteus_aculeatus
ENSSTOG00000003720	GPATCH1	100	65.514	ENSGAGG00000010067	GPATCH1	100	64.620	Gopherus_agassizii
ENSSTOG00000003720	GPATCH1	98	87.637	ENSGGOG00000010862	GPATCH1	99	87.969	Gorilla_gorilla
ENSSTOG00000003720	GPATCH1	81	53.631	ENSHBUG00000023462	gpatch1	90	50.738	Haplochromis_burtoni
ENSSTOG00000003720	GPATCH1	100	84.278	ENSHGLG00000009334	GPATCH1	100	84.813	Heterocephalus_glaber_female
ENSSTOG00000003720	GPATCH1	100	84.385	ENSHGLG00100018074	GPATCH1	100	84.920	Heterocephalus_glaber_male
ENSSTOG00000003720	GPATCH1	93	50.773	ENSIPUG00000014977	gpatch1	90	50.907	Ictalurus_punctatus
ENSSTOG00000003720	GPATCH1	91	83.726	ENSJJAG00000023765	Gpatch1	100	80.021	Jaculus_jaculus
ENSSTOG00000003720	GPATCH1	89	52.564	ENSKMAG00000017950	gpatch1	89	52.326	Kryptolebias_marmoratus
ENSSTOG00000003720	GPATCH1	81	51.443	ENSLBEG00000026527	gpatch1	88	50.847	Labrus_bergylta
ENSSTOG00000003720	GPATCH1	89	57.976	ENSLACG00000008130	GPATCH1	90	58.164	Latimeria_chalumnae
ENSSTOG00000003720	GPATCH1	81	56.420	ENSLOCG00000001800	gpatch1	90	53.731	Lepisosteus_oculatus
ENSSTOG00000003720	GPATCH1	99	87.065	ENSLAFG00000013589	GPATCH1	100	87.138	Loxodonta_africana
ENSSTOG00000003720	GPATCH1	91	87.146	ENSMFAG00000034418	GPATCH1	96	87.146	Macaca_fascicularis
ENSSTOG00000003720	GPATCH1	100	87.487	ENSMMUG00000011790	GPATCH1	100	87.487	Macaca_mulatta
ENSSTOG00000003720	GPATCH1	100	87.580	ENSMNEG00000045084	GPATCH1	100	87.580	Macaca_nemestrina
ENSSTOG00000003720	GPATCH1	100	77.312	ENSMLEG00000043840	GPATCH1	100	77.312	Mandrillus_leucophaeus
ENSSTOG00000003720	GPATCH1	81	53.299	ENSMZEG00005001926	gpatch1	82	52.703	Maylandia_zebra
ENSSTOG00000003720	GPATCH1	90	63.785	ENSMGAG00000005775	GPATCH1	89	63.853	Meleagris_gallopavo
ENSSTOG00000003720	GPATCH1	90	77.621	ENSMICG00000004829	GPATCH1	93	77.974	Microcebus_murinus
ENSSTOG00000003720	GPATCH1	99	81.828	ENSMOCG00000000174	Gpatch1	92	82.243	Microtus_ochrogaster
ENSSTOG00000003720	GPATCH1	81	50.314	ENSMMOG00000002140	gpatch1	87	50.377	Mola_mola
ENSSTOG00000003720	GPATCH1	100	72.352	ENSMODG00000012226	GPATCH1	90	73.036	Monodelphis_domestica
ENSSTOG00000003720	GPATCH1	99	48.148	ENSMALG00000014386	gpatch1	90	50.920	Monopterus_albus
ENSSTOG00000003720	GPATCH1	100	83.280	ENSMUSG00000063808	Gpatch1	100	90.816	Mus_musculus
ENSSTOG00000003720	GPATCH1	100	83.209	MGP_PahariEiJ_G0012816	Gpatch1	100	91.837	Mus_pahari
ENSSTOG00000003720	GPATCH1	100	82.655	MGP_SPRETEiJ_G0030681	Gpatch1	100	91.837	Mus_spretus
ENSSTOG00000003720	GPATCH1	100	87.245	ENSMPUG00000007658	GPATCH1	100	87.245	Mustela_putorius_furo
ENSSTOG00000003720	GPATCH1	100	85.959	ENSMLUG00000012161	GPATCH1	100	86.495	Myotis_lucifugus
ENSSTOG00000003720	GPATCH1	100	84.673	ENSNGAG00000012455	Gpatch1	100	84.673	Nannospalax_galili
ENSSTOG00000003720	GPATCH1	100	87.580	ENSNLEG00000007659	GPATCH1	100	87.580	Nomascus_leucogenys
ENSSTOG00000003720	GPATCH1	77	68.516	ENSMEUG00000015174	GPATCH1	79	67.711	Notamacropus_eugenii
ENSSTOG00000003720	GPATCH1	99	80.556	ENSODEG00000007103	GPATCH1	99	81.303	Octodon_degus
ENSSTOG00000003720	GPATCH1	81	54.522	ENSONIG00000003302	gpatch1	91	53.521	Oreochromis_niloticus
ENSSTOG00000003720	GPATCH1	99	71.246	ENSOANG00000012732	GPATCH1	99	71.551	Ornithorhynchus_anatinus
ENSSTOG00000003720	GPATCH1	100	85.745	ENSOCUG00000015905	GPATCH1	100	86.174	Oryctolagus_cuniculus
ENSSTOG00000003720	GPATCH1	89	49.706	ENSORLG00000018706	gpatch1	88	49.706	Oryzias_latipes
ENSSTOG00000003720	GPATCH1	89	48.595	ENSOMEG00000022688	gpatch1	90	48.308	Oryzias_melastigma
ENSSTOG00000003720	GPATCH1	85	86.364	ENSOGAG00000004016	GPATCH1	100	86.364	Otolemur_garnettii
ENSSTOG00000003720	GPATCH1	98	86.090	ENSOARG00000004365	GPATCH1	99	82.289	Ovis_aries
ENSSTOG00000003720	GPATCH1	100	87.580	ENSPPAG00000020990	GPATCH1	100	87.580	Pan_paniscus
ENSSTOG00000003720	GPATCH1	100	87.567	ENSPPRG00000017245	GPATCH1	100	87.567	Panthera_pardus
ENSSTOG00000003720	GPATCH1	100	88.317	ENSPTIG00000019649	GPATCH1	100	88.317	Panthera_tigris_altaica
ENSSTOG00000003720	GPATCH1	100	87.580	ENSPTRG00000010803	GPATCH1	100	87.580	Pan_troglodytes
ENSSTOG00000003720	GPATCH1	91	87.324	ENSPANG00000012374	GPATCH1	96	87.324	Papio_anubis
ENSSTOG00000003720	GPATCH1	81	56.082	ENSPKIG00000020745	gpatch1	80	55.897	Paramormyrops_kingsleyae
ENSSTOG00000003720	GPATCH1	100	63.224	ENSPSIG00000013433	GPATCH1	100	62.788	Pelodiscus_sinensis
ENSSTOG00000003720	GPATCH1	100	82.315	ENSPEMG00000000636	Gpatch1	100	80.064	Peromyscus_maniculatus_bairdii
ENSSTOG00000003720	GPATCH1	91	74.209	ENSPCIG00000021003	GPATCH1	95	74.323	Phascolarctos_cinereus
ENSSTOG00000003720	GPATCH1	70	49.245	ENSPREG00000008264	gpatch1	97	44.444	Poecilia_reticulata
ENSSTOG00000003720	GPATCH1	100	84.904	ENSPPYG00000009824	GPATCH1	100	84.904	Pongo_abelii
ENSSTOG00000003720	GPATCH1	83	77.830	ENSPCAG00000005931	GPATCH1	91	79.563	Procavia_capensis
ENSSTOG00000003720	GPATCH1	93	80.275	ENSPCOG00000009674	GPATCH1	97	81.529	Propithecus_coquereli
ENSSTOG00000003720	GPATCH1	90	90.476	ENSPVAG00000017767	GPATCH1	91	90.678	Pteropus_vampyrus
ENSSTOG00000003720	GPATCH1	81	53.836	ENSPNYG00000018189	gpatch1	92	53.218	Pundamilia_nyererei
ENSSTOG00000003720	GPATCH1	91	52.464	ENSPNAG00000013187	gpatch1	90	52.637	Pygocentrus_nattereri
ENSSTOG00000003720	GPATCH1	100	83.387	ENSRNOG00000011584	Gpatch1	100	83.387	Rattus_norvegicus
ENSSTOG00000003720	GPATCH1	100	80.538	ENSRBIG00000034723	GPATCH1	100	76.774	Rhinopithecus_bieti
ENSSTOG00000003720	GPATCH1	100	87.687	ENSRROG00000024428	GPATCH1	100	87.687	Rhinopithecus_roxellana
ENSSTOG00000003720	GPATCH1	100	87.259	ENSSBOG00000034650	GPATCH1	100	87.259	Saimiri_boliviensis_boliviensis
ENSSTOG00000003720	GPATCH1	99	72.582	ENSSHAG00000016016	GPATCH1	99	72.901	Sarcophilus_harrisii
ENSSTOG00000003720	GPATCH1	81	56.026	ENSSFOG00015011535	gpatch1	89	53.456	Scleropages_formosus
ENSSTOG00000003720	GPATCH1	99	44.884	ENSSMAG00000002883	gpatch1	93	45.842	Scophthalmus_maximus
ENSSTOG00000003720	GPATCH1	81	52.684	ENSSDUG00000007444	gpatch1	90	49.057	Seriola_dumerili
ENSSTOG00000003720	GPATCH1	81	52.369	ENSSLDG00000002856	gpatch1	92	50.966	Seriola_lalandi_dorsalis
ENSSTOG00000003720	GPATCH1	72	82.764	ENSSARG00000004108	GPATCH1	72	82.764	Sorex_araneus
ENSSTOG00000003720	GPATCH1	91	87.059	ENSSSCG00000002865	GPATCH1	94	87.059	Sus_scrofa
ENSSTOG00000003720	GPATCH1	99	64.240	ENSTGUG00000009401	GPATCH1	91	63.208	Taeniopygia_guttata
ENSSTOG00000003720	GPATCH1	81	51.507	ENSTRUG00000025081	gpatch1	90	48.502	Takifugu_rubripes
ENSSTOG00000003720	GPATCH1	81	51.507	ENSTRUG00000005785	-	90	48.502	Takifugu_rubripes
ENSSTOG00000003720	GPATCH1	81	52.577	ENSTNIG00000002554	gpatch1	99	52.889	Tetraodon_nigroviridis
ENSSTOG00000003720	GPATCH1	63	74.092	ENSTBEG00000007750	-	83	74.092	Tupaia_belangeri
ENSSTOG00000003720	GPATCH1	99	79.180	ENSTTRG00000012221	GPATCH1	100	79.380	Tursiops_truncatus
ENSSTOG00000003720	GPATCH1	90	87.648	ENSUMAG00000014645	GPATCH1	100	87.485	Ursus_maritimus
ENSSTOG00000003720	GPATCH1	79	94.286	ENSVPAG00000010313	GPATCH1	86	94.565	Vicugna_pacos
ENSSTOG00000003720	GPATCH1	94	86.629	ENSVVUG00000016572	GPATCH1	91	86.502	Vulpes_vulpes
ENSSTOG00000003720	GPATCH1	99	51.477	ENSXETG00000018276	gpatch1	100	51.477	Xenopus_tropicalis