EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSTOG00000003739 (Gene tree)
Gene ID
101956168
Gene Symbol
PABPC1L
Alias
C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Ictidomys_tridecemlineatus
Status
putative
Strand
Minus strand
Length
21167 bases
Position
chrJH393324.1:7809080-7830246
Accession
101956168
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSTOP00000003351PABPPF00658.185.9e-2811
ENSSTOP00000003351RRM_5PF13893.66.4e-1011
ENSSTOP00000003351RRM_1PF00076.226.3e-9114
ENSSTOP00000003351RRM_1PF00076.226.3e-9124
ENSSTOP00000003351RRM_1PF00076.226.3e-9134
ENSSTOP00000003351RRM_1PF00076.226.3e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSTOT00000003740PABPC1L-2011845XM_005325289ENSSTOP00000003351614 (aa)XP_005325346I3M2V7
Gene Model
Click here to download ENSSTOG00000003739's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003739's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSTOG00000003739PABPC1L6262.912ENSSTOG00000019472PABPC4L9862.912
ENSSTOG00000003739PABPC1L5937.037ENSSTOG00000000684-7937.037
ENSSTOG00000003739PABPC1L5136.986ENSSTOG00000019540-6836.986
ENSSTOG00000003739PABPC1L6134.940ENSSTOG00000007792ELAVL29934.940
ENSSTOG00000003739PABPC1L5932.967ENSSTOG00000029627-5432.967
ENSSTOG00000003739PABPC1L5944.444ENSSTOG00000010354RBM238444.444
ENSSTOG00000003739PABPC1L9669.394ENSSTOG00000016395PABPC310069.394
ENSSTOG00000003739PABPC1L9966.234ENSSTOG00000010416PABPC49866.558
ENSSTOG00000003739PABPC1L6070.558ENSSTOG00000026028-9970.558
ENSSTOG00000003739PABPC1L5432.847ENSSTOG00000000613CELF16932.847
ENSSTOG00000003739PABPC1L5631.847ENSSTOG00000006551-5931.847
ENSSTOG00000003739PABPC1L5735.616ENSSTOG00000022934CELF39535.616
ENSSTOG00000003739PABPC1L6133.735ENSSTOG00000027271ELAVL48833.735
ENSSTOG00000003739PABPC1L5830.409ENSSTOG00000025095TIAL17830.409
ENSSTOG00000003739PABPC1L6943.836ENSSTOG00000030698RBM396043.836
ENSSTOG00000003739PABPC1L6070.558ENSSTOG00000022096-9970.558
ENSSTOG00000003739PABPC1L6330.526ENSSTOG00000009130ELAVL19830.526
ENSSTOG00000003739PABPC1L6338.889ENSSTOG00000021111ELAVL39033.735
ENSSTOG00000003739PABPC1L5631.481ENSSTOG00000028543-5332.258
ENSSTOG00000003739PABPC1L5731.210ENSSTOG00000025125HNRNPA36331.210
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSTOG00000003739PABPC1L10088.436ENSG00000101104PABPC1L9992.901Homo_sapiens
ENSSTOG00000003739PABPC1L9966.990ENSAPOG00000010842pabpc1l9966.506Acanthochromis_polyacanthus
ENSSTOG00000003739PABPC1L9977.054ENSAMEG00000004099PABPC1L10077.054Ailuropoda_melanoleuca
ENSSTOG00000003739PABPC1L9973.415ENSACIG00000021004-9973.415Amphilophus_citrinellus
ENSSTOG00000003739PABPC1L9966.613ENSAOCG00000006167-9966.933Amphiprion_ocellaris
ENSSTOG00000003739PABPC1L9967.915ENSAPEG00000010558-9780.597Amphiprion_percula
ENSSTOG00000003739PABPC1L9968.174ENSATEG00000007428pabpc1l9968.174Anabas_testudineus
ENSSTOG00000003739PABPC1L9872.330ENSAPLG00000008415PABPC1L9872.419Anas_platyrhynchos
ENSSTOG00000003739PABPC1L9972.552ENSACAG00000011841PABPC1L9872.552Anolis_carolinensis
ENSSTOG00000003739PABPC1L10086.482ENSANAG00000026826PABPC1L10086.482Aotus_nancymaae
ENSSTOG00000003739PABPC1L9966.773ENSACLG00000024791pabpc1l9966.773Astatotilapia_calliptera
ENSSTOG00000003739PABPC1L9969.649ENSAMXG00000013552pabpc1l9969.649Astyanax_mexicanus
ENSSTOG00000003739PABPC1L5995.833ENSBTAG00000055300-10095.833Bos_taurus
ENSSTOG00000003739PABPC1L6776.241ENSBTAG00000016849PABPC1L8476.241Bos_taurus
ENSSTOG00000003739PABPC1L10086.971ENSCJAG00000017628PABPC1L10086.971Callithrix_jacchus
ENSSTOG00000003739PABPC1L6075.287ENSCJAG00000038506-10075.287Callithrix_jacchus
ENSSTOG00000003739PABPC1L9974.923ENSCAFG00000009573PABPC1L10074.923Canis_familiaris
ENSSTOG00000003739PABPC1L9986.885ENSCAFG00020013828PABPC1L9986.885Canis_lupus_dingo
ENSSTOG00000003739PABPC1L9786.455ENSCHIG00000025759PABPC1L9186.455Capra_hircus
ENSSTOG00000003739PABPC1L10085.668ENSTSYG00000006645PABPC1L10085.668Carlito_syrichta
ENSSTOG00000003739PABPC1L9981.273ENSCAPG00000014519PABPC1L10081.273Cavia_aperea
ENSSTOG00000003739PABPC1L10084.677ENSCPOG00000013633PABPC1L10084.677Cavia_porcellus
ENSSTOG00000003739PABPC1L10086.482ENSCCAG00000023338PABPC1L10086.482Cebus_capucinus
ENSSTOG00000003739PABPC1L10088.762ENSCATG00000034065PABPC1L10088.762Cercocebus_atys
ENSSTOG00000003739PABPC1L10082.742ENSCLAG00000005298PABPC1L10083.871Chinchilla_lanigera
ENSSTOG00000003739PABPC1L10088.599ENSCSAG00000014242PABPC1L10088.599Chlorocebus_sabaeus
ENSSTOG00000003739PABPC1L7281.448ENSCPBG00000017755-9981.448Chrysemys_picta_bellii
ENSSTOG00000003739PABPC1L6079.545ENSCPBG00000007810-8379.545Chrysemys_picta_bellii
ENSSTOG00000003739PABPC1L9750.505ENSCING00000002796-9750.405Ciona_intestinalis
ENSSTOG00000003739PABPC1L9860.261ENSCSAVG00000004246-8969.307Ciona_savignyi
ENSSTOG00000003739PABPC1L9757.737ENSCSAVG00000003102-10080.137Ciona_savignyi
ENSSTOG00000003739PABPC1L10083.628ENSCANG00000037530PABPC1L10083.628Colobus_angolensis_palliatus
ENSSTOG00000003739PABPC1L9978.247ENSCGRG00001021938Pabpc1l9978.247Cricetulus_griseus_chok1gshd
ENSSTOG00000003739PABPC1L9978.247ENSCGRG00000007946Pabpc1l9978.247Cricetulus_griseus_crigri
ENSSTOG00000003739PABPC1L9964.415ENSCSEG00000021295pabpc1l9964.415Cynoglossus_semilaevis
ENSSTOG00000003739PABPC1L9968.226ENSCVAG00000015943-8683.206Cyprinodon_variegatus
ENSSTOG00000003739PABPC1L9969.280ENSDARG00000002597pabpc1l8885.385Danio_rerio
ENSSTOG00000003739PABPC1L9987.439ENSDNOG00000048450PABPC1L9987.439Dasypus_novemcinctus
ENSSTOG00000003739PABPC1L9987.092ENSDORG00000001067Pabpc1l9987.092Dipodomys_ordii
ENSSTOG00000003739PABPC1L9689.837ENSETEG00000009969PABPC1L7389.837Echinops_telfairi
ENSSTOG00000003739PABPC1L5994.643ENSEASG00005023408-10094.643Equus_asinus_asinus
ENSSTOG00000003739PABPC1L5187.273ENSEASG00005023407-6787.273Equus_asinus_asinus
ENSSTOG00000003739PABPC1L6786.463ENSECAG00000040139-8186.463Equus_caballus
ENSSTOG00000003739PABPC1L10081.759ENSEEUG00000005978PABPC1L10081.759Erinaceus_europaeus
ENSSTOG00000003739PABPC1L9969.427ENSELUG00000001811pabpc1l9969.427Esox_lucius
ENSSTOG00000003739PABPC1L9986.885ENSFCAG00000011692PABPC1L9986.885Felis_catus
ENSSTOG00000003739PABPC1L8872.744ENSFALG00000005372PABPC1L9768.900Ficedula_albicollis
ENSSTOG00000003739PABPC1L10083.468ENSFDAG00000008291PABPC1L10083.468Fukomys_damarensis
ENSSTOG00000003739PABPC1L9968.404ENSFHEG00000003398pabpc1l9968.404Fundulus_heteroclitus
ENSSTOG00000003739PABPC1L9968.498ENSGMOG00000004437pabpc1l9868.498Gadus_morhua
ENSSTOG00000003739PABPC1L9870.790ENSGALG00000004123PABPC1L9983.213Gallus_gallus
ENSSTOG00000003739PABPC1L9964.462ENSGAFG00000021057pabpc1l9964.462Gambusia_affinis
ENSSTOG00000003739PABPC1L9966.032ENSGACG00000002792pabpc1l9966.032Gasterosteus_aculeatus
ENSSTOG00000003739PABPC1L9974.240ENSGAGG00000000589PABPC1L9874.240Gopherus_agassizii
ENSSTOG00000003739PABPC1L10088.274ENSGGOG00000004584PABPC1L10088.274Gorilla_gorilla
ENSSTOG00000003739PABPC1L9966.773ENSHBUG00000006134pabpc1l9966.773Haplochromis_burtoni
ENSSTOG00000003739PABPC1L10085.000ENSHGLG00000008434PABPC1L10085.000Heterocephalus_glaber_female
ENSSTOG00000003739PABPC1L5980.337ENSHGLG00100019506-10080.337Heterocephalus_glaber_male
ENSSTOG00000003739PABPC1L10085.000ENSHGLG00100012151PABPC1L10085.000Heterocephalus_glaber_male
ENSSTOG00000003739PABPC1L9966.502ENSHCOG00000009270pabpc1l9967.000Hippocampus_comes
ENSSTOG00000003739PABPC1L5361.538ENSIPUG00000005537-10061.538Ictalurus_punctatus
ENSSTOG00000003739PABPC1L5961.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSSTOG00000003739PABPC1L9970.000ENSIPUG00000012602pabpc1l9970.000Ictalurus_punctatus
ENSSTOG00000003739PABPC1L6056.784ENSIPUG00000006780-9656.784Ictalurus_punctatus
ENSSTOG00000003739PABPC1L9970.315ENSJJAG00000022406Pabpc1l9967.267Jaculus_jaculus
ENSSTOG00000003739PABPC1L9968.447ENSKMAG00000016847pabpc1l9968.447Kryptolebias_marmoratus
ENSSTOG00000003739PABPC1L9966.348ENSLBEG00000010084pabpc1l9966.348Labrus_bergylta
ENSSTOG00000003739PABPC1L9969.157ENSLACG00000005762PABPC1L9970.588Latimeria_chalumnae
ENSSTOG00000003739PABPC1L9970.560ENSLOCG00000007519pabpc1l9870.560Lepisosteus_oculatus
ENSSTOG00000003739PABPC1L9982.907ENSLAFG00000003553PABPC1L10082.907Loxodonta_africana
ENSSTOG00000003739PABPC1L10088.599ENSMFAG00000040365PABPC1L10088.599Macaca_fascicularis
ENSSTOG00000003739PABPC1L10086.062ENSMNEG00000032298PABPC1L10086.062Macaca_nemestrina
ENSSTOG00000003739PABPC1L10088.762ENSMLEG00000043139PABPC1L10088.762Mandrillus_leucophaeus
ENSSTOG00000003739PABPC1L9766.998ENSMAMG00000011854pabpc1l9766.998Mastacembelus_armatus
ENSSTOG00000003739PABPC1L9966.773ENSMZEG00005023713pabpc1l9966.773Maylandia_zebra
ENSSTOG00000003739PABPC1L9974.110ENSMGAG00000003674PABPC1L9874.110Meleagris_gallopavo
ENSSTOG00000003739PABPC1L9976.136ENSMOCG00000013186Pabpc1l9976.136Microtus_ochrogaster
ENSSTOG00000003739PABPC1L9967.638ENSMMOG00000020574-9083.846Mola_mola
ENSSTOG00000003739PABPC1L9777.000ENSMODG00000016198PABPC1L9977.000Monodelphis_domestica
ENSSTOG00000003739PABPC1L9766.941ENSMALG00000021622pabpc1l10066.941Monopterus_albus
ENSSTOG00000003739PABPC1L9977.941MGP_CAROLIEiJ_G0024627Pabpc1l9977.941Mus_caroli
ENSSTOG00000003739PABPC1L9977.941ENSMUSG00000054582Pabpc1l9977.941Mus_musculus
ENSSTOG00000003739PABPC1L9978.467MGP_PahariEiJ_G0026071Pabpc1l9978.467Mus_pahari
ENSSTOG00000003739PABPC1L9977.941MGP_SPRETEiJ_G0025549Pabpc1l9977.941Mus_spretus
ENSSTOG00000003739PABPC1L9984.740ENSMPUG00000017646PABPC1L9984.740Mustela_putorius_furo
ENSSTOG00000003739PABPC1L9878.100ENSMLUG00000006324PABPC1L9778.100Myotis_lucifugus
ENSSTOG00000003739PABPC1L9979.579ENSNGAG00000010458Pabpc1l9979.579Nannospalax_galili
ENSSTOG00000003739PABPC1L9967.311ENSNBRG00000016633pabpc1l9972.902Neolamprologus_brichardi
ENSSTOG00000003739PABPC1L10066.450ENSMEUG00000007905-10066.450Notamacropus_eugenii
ENSSTOG00000003739PABPC1L10086.016ENSOPRG00000011846PABPC1L10086.016Ochotona_princeps
ENSSTOG00000003739PABPC1L10076.873ENSODEG00000015482PABPC1L10076.873Octodon_degus
ENSSTOG00000003739PABPC1L5874.375ENSODEG00000002920-9774.375Octodon_degus
ENSSTOG00000003739PABPC1L9967.093ENSONIG00000017314pabpc1l9967.093Oreochromis_niloticus
ENSSTOG00000003739PABPC1L8965.823ENSOANG00000015793-10065.823Ornithorhynchus_anatinus
ENSSTOG00000003739PABPC1L9979.167ENSOCUG00000003005PABPC1L10079.167Oryctolagus_cuniculus
ENSSTOG00000003739PABPC1L9773.141ENSORLG00000010322pabpc1l9973.141Oryzias_latipes
ENSSTOG00000003739PABPC1L9873.141ENSORLG00020021193pabpc1l9973.141Oryzias_latipes_hni
ENSSTOG00000003739PABPC1L9873.141ENSORLG00015017018pabpc1l9973.141Oryzias_latipes_hsok
ENSSTOG00000003739PABPC1L9963.775ENSOMEG00000010789pabpc1l9963.775Oryzias_melastigma
ENSSTOG00000003739PABPC1L9983.974ENSOGAG00000032999PABPC1L10083.974Otolemur_garnettii
ENSSTOG00000003739PABPC1L9986.700ENSOARG00000004578PABPC1L9986.700Ovis_aries
ENSSTOG00000003739PABPC1L10088.274ENSPPAG00000039677PABPC1L10088.274Pan_paniscus
ENSSTOG00000003739PABPC1L6380.864ENSPPRG00000019327-9880.864Panthera_pardus
ENSSTOG00000003739PABPC1L9987.086ENSPTIG00000006524PABPC1L9987.086Panthera_tigris_altaica
ENSSTOG00000003739PABPC1L6392.593ENSPTRG00000013531PABPC1L9992.593Pan_troglodytes
ENSSTOG00000003739PABPC1L10088.762ENSPANG00000018788PABPC1L10088.762Papio_anubis
ENSSTOG00000003739PABPC1L5380.153ENSPKIG00000016810-9380.153Paramormyrops_kingsleyae
ENSSTOG00000003739PABPC1L9970.900ENSPKIG00000007322pabpc1l9970.900Paramormyrops_kingsleyae
ENSSTOG00000003739PABPC1L6882.974ENSPSIG00000013289PABPC1L9982.974Pelodiscus_sinensis
ENSSTOG00000003739PABPC1L7266.332ENSPMGG00000023121-9366.332Periophthalmus_magnuspinnatus
ENSSTOG00000003739PABPC1L6176.744ENSPMGG00000023117pabpc1l9282.576Periophthalmus_magnuspinnatus
ENSSTOG00000003739PABPC1L9977.614ENSPEMG00000020671Pabpc1l9977.614Peromyscus_maniculatus_bairdii
ENSSTOG00000003739PABPC1L9968.395ENSPFOG00000013241pabpc1l9968.123Poecilia_formosa
ENSSTOG00000003739PABPC1L5384.615ENSPLAG00000023686-9284.615Poecilia_latipinna
ENSSTOG00000003739PABPC1L9967.909ENSPLAG00000017490-9967.909Poecilia_latipinna
ENSSTOG00000003739PABPC1L5384.615ENSPMEG00000009185-8884.615Poecilia_mexicana
ENSSTOG00000003739PABPC1L9968.182ENSPMEG00000007677pabpc1l9968.182Poecilia_mexicana
ENSSTOG00000003739PABPC1L6776.513ENSPREG00000015886pabpc1l9976.513Poecilia_reticulata
ENSSTOG00000003739PABPC1L10088.436ENSPPYG00000011042PABPC1L10088.436Pongo_abelii
ENSSTOG00000003739PABPC1L6289.062ENSPCAG00000011787-7589.062Procavia_capensis
ENSSTOG00000003739PABPC1L9985.502ENSPCOG00000020630PABPC1L9985.502Propithecus_coquereli
ENSSTOG00000003739PABPC1L9983.115ENSPVAG00000012663PABPC1L9983.115Pteropus_vampyrus
ENSSTOG00000003739PABPC1L9872.662ENSPNYG00000004101pabpc1l9972.662Pundamilia_nyererei
ENSSTOG00000003739PABPC1L9963.360ENSPNAG00000021248pabpc1l9963.360Pygocentrus_nattereri
ENSSTOG00000003739PABPC1L9977.634ENSRNOG00000012750Pabpc1l10077.634Rattus_norvegicus
ENSSTOG00000003739PABPC1L10088.436ENSRBIG00000035381PABPC1L10088.436Rhinopithecus_bieti
ENSSTOG00000003739PABPC1L10088.274ENSRROG00000044498PABPC1L10088.274Rhinopithecus_roxellana
ENSSTOG00000003739PABPC1L10086.808ENSSBOG00000009532-10086.808Saimiri_boliviensis_boliviensis
ENSSTOG00000003739PABPC1L9871.370ENSSHAG00000011446PABPC1L10071.370Sarcophilus_harrisii
ENSSTOG00000003739PABPC1L9971.154ENSSFOG00015017304pabpc1l9971.154Scleropages_formosus
ENSSTOG00000003739PABPC1L9966.774ENSSMAG00000010516pabpc1l9883.721Scophthalmus_maximus
ENSSTOG00000003739PABPC1L9967.680ENSSDUG00000014743pabpc1l9967.680Seriola_dumerili
ENSSTOG00000003739PABPC1L9973.861ENSSLDG00000006981pabpc1l9875.799Seriola_lalandi_dorsalis
ENSSTOG00000003739PABPC1L9972.231ENSSPUG00000004233PABPC1L9872.231Sphenodon_punctatus
ENSSTOG00000003739PABPC1L9965.620ENSSPAG00000017137pabpc1l9965.620Stegastes_partitus
ENSSTOG00000003739PABPC1L9984.539ENSSSCG00000007382PABPC1L9984.539Sus_scrofa
ENSSTOG00000003739PABPC1L9972.713ENSTGUG00000005114PABPC1L9972.713Taeniopygia_guttata
ENSSTOG00000003739PABPC1L9766.558ENSTRUG00000011085pabpc1l9766.558Takifugu_rubripes
ENSSTOG00000003739PABPC1L9964.865ENSTNIG00000017903pabpc1l9864.865Tetraodon_nigroviridis
ENSSTOG00000003739PABPC1L9492.466ENSTBEG00000002851PABPC1L8092.466Tupaia_belangeri
ENSSTOG00000003739PABPC1L9483.854ENSTTRG00000007618PABPC1L10083.953Tursiops_truncatus
ENSSTOG00000003739PABPC1L9984.679ENSUAMG00000017682PABPC1L9984.679Ursus_americanus
ENSSTOG00000003739PABPC1L6891.530ENSUMAG00000025436PABPC1L9491.530Ursus_maritimus
ENSSTOG00000003739PABPC1L9992.490ENSVVUG00000018939PABPC1L9992.490Vulpes_vulpes
ENSSTOG00000003739PABPC1L9968.599ENSXETG00000022831pabpc1l9868.599Xenopus_tropicalis
ENSSTOG00000003739PABPC1L9967.794ENSXCOG00000005459pabpc1l9980.142Xiphophorus_couchianus
ENSSTOG00000003739PABPC1L9967.961ENSXMAG00000017135pabpc1l9967.961Xiphophorus_maculatus

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