EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000003878 (Gene tree)
Gene ID: 101959991
Gene Symbol: RTCB
Alias: C22orf28|FAAP|HSPC117
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 22644 bases
Position: chrJH393302.1:7334154-7356797
Accession: 101959991
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000003483	RtcB	PF01139.17	1.3e-145	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000003885	RTCB-201	6196	XM_005322320	ENSSTOP00000003483	505 (aa)	XP_005322377	I3M372

Gene Model

Click here to download ENSSTOG00000003878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000003878	RTCB	100	99.604	ENSG00000100220	RTCB	100	99.604	Homo_sapiens
ENSSTOG00000003878	RTCB	100	94.455	ENSAPOG00000006040	rtcb	100	94.455	Acanthochromis_polyacanthus
ENSSTOG00000003878	RTCB	100	99.406	ENSAMEG00000016152	RTCB	100	99.406	Ailuropoda_melanoleuca
ENSSTOG00000003878	RTCB	100	89.901	ENSACIG00000009083	rtcb	100	89.901	Amphilophus_citrinellus
ENSSTOG00000003878	RTCB	100	94.653	ENSAOCG00000005662	rtcb	100	95.435	Amphiprion_ocellaris
ENSSTOG00000003878	RTCB	96	89.733	ENSAPEG00000024653	rtcb	100	89.733	Amphiprion_percula
ENSSTOG00000003878	RTCB	100	94.653	ENSAPEG00000024701	rtcb	100	94.653	Amphiprion_percula
ENSSTOG00000003878	RTCB	100	94.455	ENSATEG00000000618	rtcb	100	94.455	Anabas_testudineus
ENSSTOG00000003878	RTCB	100	93.642	ENSACAG00000014817	RTCB	100	93.642	Anolis_carolinensis
ENSSTOG00000003878	RTCB	100	83.762	ENSANAG00000018191	-	91	83.762	Aotus_nancymaae
ENSSTOG00000003878	RTCB	100	62.846	ENSANAG00000023724	-	100	62.846	Aotus_nancymaae
ENSSTOG00000003878	RTCB	100	92.871	ENSACLG00000008367	rtcb	100	93.913	Astatotilapia_calliptera
ENSSTOG00000003878	RTCB	100	94.257	ENSAMXG00000042320	rtcb	100	94.257	Astyanax_mexicanus
ENSSTOG00000003878	RTCB	100	99.208	ENSBTAG00000011070	RTCB	100	99.208	Bos_taurus
ENSSTOG00000003878	RTCB	100	73.267	WBGene00008877	rtcb-1	100	73.267	Caenorhabditis_elegans
ENSSTOG00000003878	RTCB	100	99.406	ENSCJAG00000006128	RTCB	100	99.406	Callithrix_jacchus
ENSSTOG00000003878	RTCB	100	99.406	ENSCAFG00000001785	RTCB	100	99.406	Canis_familiaris
ENSSTOG00000003878	RTCB	100	95.050	ENSCAFG00000010789	-	100	95.050	Canis_familiaris
ENSSTOG00000003878	RTCB	87	95.682	ENSCAFG00020018953	-	99	95.682	Canis_lupus_dingo
ENSSTOG00000003878	RTCB	100	99.406	ENSCAFG00020004890	-	100	99.406	Canis_lupus_dingo
ENSSTOG00000003878	RTCB	100	99.406	ENSCHIG00000027009	-	100	99.406	Capra_hircus
ENSSTOG00000003878	RTCB	100	99.010	ENSTSYG00000012320	RTCB	100	99.010	Carlito_syrichta
ENSSTOG00000003878	RTCB	94	98.952	ENSCAPG00000011647	RTCB	96	98.952	Cavia_aperea
ENSSTOG00000003878	RTCB	100	99.406	ENSCCAG00000000618	RTCB	100	99.406	Cebus_capucinus
ENSSTOG00000003878	RTCB	100	99.208	ENSCATG00000033424	RTCB	100	99.208	Cercocebus_atys
ENSSTOG00000003878	RTCB	100	99.208	ENSCLAG00000007997	RTCB	100	99.208	Chinchilla_lanigera
ENSSTOG00000003878	RTCB	100	99.208	ENSCSAG00000008351	RTCB	100	99.208	Chlorocebus_sabaeus
ENSSTOG00000003878	RTCB	100	85.347	ENSCHOG00000009123	RTCB	100	85.347	Choloepus_hoffmanni
ENSSTOG00000003878	RTCB	100	96.238	ENSCPBG00000023184	RTCB	100	96.238	Chrysemys_picta_bellii
ENSSTOG00000003878	RTCB	100	81.980	ENSCING00000003830	-	100	81.980	Ciona_intestinalis
ENSSTOG00000003878	RTCB	100	82.376	ENSCSAVG00000008124	-	99	82.376	Ciona_savignyi
ENSSTOG00000003878	RTCB	100	95.446	ENSCANG00000001891	RTCB	100	95.446	Colobus_angolensis_palliatus
ENSSTOG00000003878	RTCB	100	99.010	ENSCGRG00001011173	Rtcb	100	99.010	Cricetulus_griseus_chok1gshd
ENSSTOG00000003878	RTCB	93	99.363	ENSCGRG00000009587	-	96	99.363	Cricetulus_griseus_crigri
ENSSTOG00000003878	RTCB	100	93.861	ENSCSEG00000003986	rtcb	100	93.861	Cynoglossus_semilaevis
ENSSTOG00000003878	RTCB	82	93.269	ENSCVAG00000000569	rtcb	95	93.269	Cyprinodon_variegatus
ENSSTOG00000003878	RTCB	100	93.861	ENSDARG00000101047	rtcb	100	93.861	Danio_rerio
ENSSTOG00000003878	RTCB	80	97.052	ENSDNOG00000012425	RTCB	99	97.052	Dasypus_novemcinctus
ENSSTOG00000003878	RTCB	100	98.614	ENSDORG00000010855	Rtcb	100	98.614	Dipodomys_ordii
ENSSTOG00000003878	RTCB	99	85.487	FBgn0032781	RtcB	99	85.487	Drosophila_melanogaster
ENSSTOG00000003878	RTCB	100	92.673	ENSETEG00000001988	RTCB	100	92.673	Echinops_telfairi
ENSSTOG00000003878	RTCB	100	85.545	ENSEBUG00000014235	rtcb	100	85.545	Eptatretus_burgeri
ENSSTOG00000003878	RTCB	100	99.406	ENSEASG00005019059	RTCB	100	99.406	Equus_asinus_asinus
ENSSTOG00000003878	RTCB	100	99.406	ENSECAG00000023998	RTCB	100	99.406	Equus_caballus
ENSSTOG00000003878	RTCB	89	89.933	ENSEEUG00000006251	RTCB	100	89.933	Erinaceus_europaeus
ENSSTOG00000003878	RTCB	100	82.609	ENSELUG00000009275	rtcb	100	82.609	Esox_lucius
ENSSTOG00000003878	RTCB	100	99.604	ENSFCAG00000026480	RTCB	100	99.604	Felis_catus
ENSSTOG00000003878	RTCB	100	97.624	ENSFALG00000013334	RTCB	100	97.624	Ficedula_albicollis
ENSSTOG00000003878	RTCB	100	99.406	ENSFDAG00000018150	RTCB	100	99.406	Fukomys_damarensis
ENSSTOG00000003878	RTCB	100	94.455	ENSFHEG00000009595	rtcb	100	94.455	Fundulus_heteroclitus
ENSSTOG00000003878	RTCB	100	91.881	ENSGMOG00000018882	rtcb	100	91.881	Gadus_morhua
ENSSTOG00000003878	RTCB	100	97.228	ENSGALG00000012611	RTCB	100	97.228	Gallus_gallus
ENSSTOG00000003878	RTCB	100	94.653	ENSGAFG00000004198	rtcb	100	94.653	Gambusia_affinis
ENSSTOG00000003878	RTCB	100	93.465	ENSGACG00000000586	rtcb	100	93.465	Gasterosteus_aculeatus
ENSSTOG00000003878	RTCB	93	95.532	ENSGAGG00000019133	RTCB	98	95.532	Gopherus_agassizii
ENSSTOG00000003878	RTCB	100	99.604	ENSGGOG00000011402	RTCB	100	99.604	Gorilla_gorilla
ENSSTOG00000003878	RTCB	100	92.871	ENSHBUG00000020571	rtcb	100	92.871	Haplochromis_burtoni
ENSSTOG00000003878	RTCB	100	99.406	ENSHGLG00000004492	RTCB	100	99.406	Heterocephalus_glaber_female
ENSSTOG00000003878	RTCB	93	70.339	ENSHGLG00000001066	-	99	70.339	Heterocephalus_glaber_female
ENSSTOG00000003878	RTCB	100	99.406	ENSHGLG00100008965	RTCB	100	99.406	Heterocephalus_glaber_male
ENSSTOG00000003878	RTCB	100	91.519	ENSHCOG00000006450	rtcb	100	91.519	Hippocampus_comes
ENSSTOG00000003878	RTCB	100	94.257	ENSIPUG00000015443	rtcb	100	94.257	Ictalurus_punctatus
ENSSTOG00000003878	RTCB	100	98.614	ENSJJAG00000010667	Rtcb	100	98.614	Jaculus_jaculus
ENSSTOG00000003878	RTCB	100	94.257	ENSKMAG00000013178	rtcb	100	94.257	Kryptolebias_marmoratus
ENSSTOG00000003878	RTCB	100	94.653	ENSLBEG00000010566	RTCB	100	94.653	Labrus_bergylta
ENSSTOG00000003878	RTCB	100	93.663	ENSLBEG00000000214	rtcb	100	93.663	Labrus_bergylta
ENSSTOG00000003878	RTCB	100	95.050	ENSLACG00000013033	RTCB	100	95.050	Latimeria_chalumnae
ENSSTOG00000003878	RTCB	100	94.455	ENSLOCG00000016515	rtcb	99	94.455	Lepisosteus_oculatus
ENSSTOG00000003878	RTCB	100	98.812	ENSLAFG00000002082	RTCB	100	98.812	Loxodonta_africana
ENSSTOG00000003878	RTCB	100	99.208	ENSMFAG00000034419	RTCB	100	99.208	Macaca_fascicularis
ENSSTOG00000003878	RTCB	100	99.208	ENSMMUG00000006720	RTCB	100	99.208	Macaca_mulatta
ENSSTOG00000003878	RTCB	100	99.208	ENSMNEG00000040669	RTCB	100	99.208	Macaca_nemestrina
ENSSTOG00000003878	RTCB	100	99.208	ENSMLEG00000040505	RTCB	100	99.208	Mandrillus_leucophaeus
ENSSTOG00000003878	RTCB	100	94.257	ENSMAMG00000020676	rtcb	100	94.257	Mastacembelus_armatus
ENSSTOG00000003878	RTCB	100	92.871	ENSMZEG00005018942	rtcb	100	92.871	Maylandia_zebra
ENSSTOG00000003878	RTCB	100	96.844	ENSMGAG00000012805	RTCB	100	96.844	Meleagris_gallopavo
ENSSTOG00000003878	RTCB	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSSTOG00000003878	RTCB	100	79.802	ENSMICG00000036677	-	100	79.802	Microcebus_murinus
ENSSTOG00000003878	RTCB	100	99.604	ENSMICG00000013303	-	100	99.604	Microcebus_murinus
ENSSTOG00000003878	RTCB	100	99.010	ENSMOCG00000002440	Rtcb	100	99.010	Microtus_ochrogaster
ENSSTOG00000003878	RTCB	100	94.455	ENSMMOG00000005987	rtcb	100	94.455	Mola_mola
ENSSTOG00000003878	RTCB	100	98.020	ENSMODG00000001414	RTCB	100	98.020	Monodelphis_domestica
ENSSTOG00000003878	RTCB	100	94.653	ENSMALG00000007603	rtcb	100	94.653	Monopterus_albus
ENSSTOG00000003878	RTCB	100	99.208	MGP_CAROLIEiJ_G0015689	Rtcb	100	99.208	Mus_caroli
ENSSTOG00000003878	RTCB	100	99.208	ENSMUSG00000001783	Rtcb	100	99.208	Mus_musculus
ENSSTOG00000003878	RTCB	100	99.208	MGP_PahariEiJ_G0031396	Rtcb	100	99.208	Mus_pahari
ENSSTOG00000003878	RTCB	100	99.208	MGP_SPRETEiJ_G0016507	Rtcb	100	99.208	Mus_spretus
ENSSTOG00000003878	RTCB	100	99.406	ENSMPUG00000012285	RTCB	100	99.406	Mustela_putorius_furo
ENSSTOG00000003878	RTCB	100	96.844	ENSMLUG00000007803	RTCB	100	96.844	Myotis_lucifugus
ENSSTOG00000003878	RTCB	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSSTOG00000003878	RTCB	100	93.069	ENSNBRG00000017202	rtcb	100	93.069	Neolamprologus_brichardi
ENSSTOG00000003878	RTCB	100	99.604	ENSNLEG00000004960	RTCB	100	99.604	Nomascus_leucogenys
ENSSTOG00000003878	RTCB	100	72.673	ENSMEUG00000007809	-	100	72.673	Notamacropus_eugenii
ENSSTOG00000003878	RTCB	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSSTOG00000003878	RTCB	100	65.347	ENSODEG00000005042	-	100	65.347	Octodon_degus
ENSSTOG00000003878	RTCB	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSSTOG00000003878	RTCB	100	94.059	ENSONIG00000007474	rtcb	100	94.059	Oreochromis_niloticus
ENSSTOG00000003878	RTCB	100	98.020	ENSOANG00000005524	RTCB	100	98.020	Ornithorhynchus_anatinus
ENSSTOG00000003878	RTCB	93	99.362	ENSOCUG00000008270	RTCB	96	99.362	Oryctolagus_cuniculus
ENSSTOG00000003878	RTCB	100	93.663	ENSORLG00000020093	rtcb	100	93.663	Oryzias_latipes
ENSSTOG00000003878	RTCB	100	93.663	ENSORLG00020003706	rtcb	100	93.663	Oryzias_latipes_hni
ENSSTOG00000003878	RTCB	100	93.861	ENSORLG00015002968	rtcb	100	93.861	Oryzias_latipes_hsok
ENSSTOG00000003878	RTCB	100	93.465	ENSOMEG00000021278	rtcb	100	93.465	Oryzias_melastigma
ENSSTOG00000003878	RTCB	100	99.010	ENSOGAG00000001425	RTCB	100	99.010	Otolemur_garnettii
ENSSTOG00000003878	RTCB	100	99.406	ENSOARG00000018008	RTCB	100	99.406	Ovis_aries
ENSSTOG00000003878	RTCB	100	99.604	ENSPPAG00000028667	RTCB	100	99.604	Pan_paniscus
ENSSTOG00000003878	RTCB	100	99.604	ENSPPRG00000004038	RTCB	100	99.604	Panthera_pardus
ENSSTOG00000003878	RTCB	94	96.211	ENSPTIG00000020499	RTCB	97	96.211	Panthera_tigris_altaica
ENSSTOG00000003878	RTCB	100	99.604	ENSPTRG00000014287	RTCB	100	99.604	Pan_troglodytes
ENSSTOG00000003878	RTCB	100	99.208	ENSPANG00000016035	RTCB	100	99.208	Papio_anubis
ENSSTOG00000003878	RTCB	100	92.673	ENSPKIG00000001881	rtcb	100	92.673	Paramormyrops_kingsleyae
ENSSTOG00000003878	RTCB	91	97.826	ENSPSIG00000011690	RTCB	100	97.826	Pelodiscus_sinensis
ENSSTOG00000003878	RTCB	100	94.455	ENSPMGG00000016672	rtcb	100	94.455	Periophthalmus_magnuspinnatus
ENSSTOG00000003878	RTCB	100	99.208	ENSPEMG00000019548	Rtcb	100	99.208	Peromyscus_maniculatus_bairdii
ENSSTOG00000003878	RTCB	100	91.485	ENSPMAG00000005657	rtcb	100	91.485	Petromyzon_marinus
ENSSTOG00000003878	RTCB	100	98.416	ENSPCIG00000009467	RTCB	100	98.416	Phascolarctos_cinereus
ENSSTOG00000003878	RTCB	100	95.050	ENSPFOG00000003058	rtcb	100	95.050	Poecilia_formosa
ENSSTOG00000003878	RTCB	100	94.851	ENSPLAG00000017663	rtcb	100	94.851	Poecilia_latipinna
ENSSTOG00000003878	RTCB	100	95.050	ENSPMEG00000006227	rtcb	100	95.050	Poecilia_mexicana
ENSSTOG00000003878	RTCB	100	95.050	ENSPREG00000018467	rtcb	100	95.050	Poecilia_reticulata
ENSSTOG00000003878	RTCB	100	99.604	ENSPPYG00000011752	RTCB	100	99.604	Pongo_abelii
ENSSTOG00000003878	RTCB	93	81.356	ENSPCAG00000013641	RTCB	100	81.356	Procavia_capensis
ENSSTOG00000003878	RTCB	100	99.406	ENSPCOG00000017243	RTCB	100	99.406	Propithecus_coquereli
ENSSTOG00000003878	RTCB	93	98.723	ENSPVAG00000002380	RTCB	100	98.723	Pteropus_vampyrus
ENSSTOG00000003878	RTCB	100	92.871	ENSPNYG00000022760	rtcb	100	92.871	Pundamilia_nyererei
ENSSTOG00000003878	RTCB	100	94.851	ENSPNAG00000009209	rtcb	100	94.851	Pygocentrus_nattereri
ENSSTOG00000003878	RTCB	100	99.208	ENSRNOG00000004813	Rtcb	100	99.208	Rattus_norvegicus
ENSSTOG00000003878	RTCB	100	90.316	ENSRBIG00000042090	RTCB	100	90.316	Rhinopithecus_bieti
ENSSTOG00000003878	RTCB	100	94.455	ENSSBOG00000020085	-	100	94.455	Saimiri_boliviensis_boliviensis
ENSSTOG00000003878	RTCB	94	99.367	ENSSHAG00000016277	RTCB	100	99.367	Sarcophilus_harrisii
ENSSTOG00000003878	RTCB	100	93.465	ENSSFOG00015011572	RTCB	100	93.465	Scleropages_formosus
ENSSTOG00000003878	RTCB	100	93.069	ENSSFOG00015000763	rtcb	100	93.069	Scleropages_formosus
ENSSTOG00000003878	RTCB	100	90.495	ENSSMAG00000005096	rtcb	100	90.495	Scophthalmus_maximus
ENSSTOG00000003878	RTCB	100	93.663	ENSSDUG00000012605	rtcb	100	93.663	Seriola_dumerili
ENSSTOG00000003878	RTCB	100	93.663	ENSSLDG00000019458	rtcb	100	93.663	Seriola_lalandi_dorsalis
ENSSTOG00000003878	RTCB	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSSTOG00000003878	RTCB	100	96.238	ENSSPUG00000012814	RTCB	100	96.238	Sphenodon_punctatus
ENSSTOG00000003878	RTCB	100	94.653	ENSSPAG00000004623	rtcb	100	94.653	Stegastes_partitus
ENSSTOG00000003878	RTCB	100	99.604	ENSSSCG00000000158	RTCB	100	99.604	Sus_scrofa
ENSSTOG00000003878	RTCB	100	97.624	ENSTGUG00000010947	RTCB	99	97.624	Taeniopygia_guttata
ENSSTOG00000003878	RTCB	91	95.217	ENSTRUG00000009880	rtcb	100	95.217	Takifugu_rubripes
ENSSTOG00000003878	RTCB	100	93.069	ENSTNIG00000002484	rtcb	100	93.069	Tetraodon_nigroviridis
ENSSTOG00000003878	RTCB	100	85.941	ENSTBEG00000004418	RTCB	100	85.941	Tupaia_belangeri
ENSSTOG00000003878	RTCB	93	98.936	ENSTTRG00000006417	RTCB	100	98.936	Tursiops_truncatus
ENSSTOG00000003878	RTCB	100	99.406	ENSUAMG00000022792	RTCB	100	99.406	Ursus_americanus
ENSSTOG00000003878	RTCB	100	99.406	ENSUMAG00000017225	RTCB	100	99.406	Ursus_maritimus
ENSSTOG00000003878	RTCB	100	99.406	ENSVPAG00000005375	RTCB	100	99.406	Vicugna_pacos
ENSSTOG00000003878	RTCB	100	99.406	ENSVVUG00000023408	RTCB	100	99.509	Vulpes_vulpes
ENSSTOG00000003878	RTCB	100	94.653	ENSXETG00000011523	rtcb	100	94.653	Xenopus_tropicalis
ENSSTOG00000003878	RTCB	100	94.851	ENSXMAG00000002855	rtcb	100	94.851	Xiphophorus_maculatus