EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000003977 (Gene tree)
Gene ID: 101971780
Gene Symbol: DDX1
Alias: DBP-RB
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 34382 bases
Position: chrJH393303.1:14884442-14918823
Accession: 101971780
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000032249	DEAD	PF00270.29	5.6e-80	1	1
ENSSTOP00000003564	DEAD	PF00270.29	5.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000003976	DDX1-202	2220	-	ENSSTOP00000003564	739 (aa)	-	I3M3D3
ENSSTOT00000039174	DDX1-201	3001	XM_005322629	ENSSTOP00000032249	734 (aa)	XP_005322686	A0A287DFD0

Gene Model

Click here to download ENSSTOG00000003977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000003977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000003977	DDX1	53	49.020	ENSSTOG00000005213	DDX10	55	47.170
ENSSTOG00000003977	DDX1	54	50.000	ENSSTOG00000000464	DDX56	67	50.000
ENSSTOG00000003977	DDX1	54	48.333	ENSSTOG00000027266	DDX47	77	48.333
ENSSTOG00000003977	DDX1	52	45.098	ENSSTOG00000014475	DDX6	61	45.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000003977	DDX1	100	98.229	ENSG00000079785	DDX1	99	98.229	Homo_sapiens
ENSSTOG00000003977	DDX1	100	84.332	ENSAPOG00000003166	ddx1	100	84.332	Acanthochromis_polyacanthus
ENSSTOG00000003977	DDX1	100	98.234	ENSAMEG00000001071	DDX1	99	98.234	Ailuropoda_melanoleuca
ENSSTOG00000003977	DDX1	89	83.206	ENSACIG00000017422	ddx1	99	82.595	Amphilophus_citrinellus
ENSSTOG00000003977	DDX1	89	82.822	ENSAOCG00000015436	ddx1	94	84.434	Amphiprion_ocellaris
ENSSTOG00000003977	DDX1	100	85.422	ENSAPEG00000007699	ddx1	100	85.422	Amphiprion_percula
ENSSTOG00000003977	DDX1	94	84.249	ENSATEG00000003965	ddx1	98	83.969	Anabas_testudineus
ENSSTOG00000003977	DDX1	100	92.547	ENSAPLG00000011093	DDX1	99	92.547	Anas_platyrhynchos
ENSSTOG00000003977	DDX1	94	90.896	ENSACAG00000011036	DDX1	99	90.896	Anolis_carolinensis
ENSSTOG00000003977	DDX1	100	98.501	ENSANAG00000037912	DDX1	100	98.234	Aotus_nancymaae
ENSSTOG00000003977	DDX1	100	84.605	ENSACLG00000008850	ddx1	99	83.639	Astatotilapia_calliptera
ENSSTOG00000003977	DDX1	100	85.014	ENSAMXG00000002100	ddx1	99	85.014	Astyanax_mexicanus
ENSSTOG00000003977	DDX1	100	97.684	ENSBTAG00000009906	DDX1	99	97.684	Bos_taurus
ENSSTOG00000003977	DDX1	98	47.154	WBGene00021938	Y55F3BR.1	98	47.154	Caenorhabditis_elegans
ENSSTOG00000003977	DDX1	100	98.501	ENSCJAG00000007076	DDX1	99	98.501	Callithrix_jacchus
ENSSTOG00000003977	DDX1	100	98.365	ENSCAFG00000003686	DDX1	99	98.365	Canis_familiaris
ENSSTOG00000003977	DDX1	100	98.365	ENSCAFG00020026083	DDX1	99	98.365	Canis_lupus_dingo
ENSSTOG00000003977	DDX1	100	97.684	ENSCHIG00000011046	DDX1	99	97.684	Capra_hircus
ENSSTOG00000003977	DDX1	99	70.149	ENSTSYG00000037396	-	98	73.525	Carlito_syrichta
ENSSTOG00000003977	DDX1	100	98.774	ENSTSYG00000002477	-	99	98.774	Carlito_syrichta
ENSSTOG00000003977	DDX1	87	77.709	ENSCAPG00000008906	-	93	77.709	Cavia_aperea
ENSSTOG00000003977	DDX1	68	97.177	ENSCPOG00000032467	-	99	97.177	Cavia_porcellus
ENSSTOG00000003977	DDX1	88	95.406	ENSCPOG00000009816	-	96	95.406	Cavia_porcellus
ENSSTOG00000003977	DDX1	100	98.501	ENSCCAG00000030085	DDX1	100	98.422	Cebus_capucinus
ENSSTOG00000003977	DDX1	100	98.365	ENSCATG00000033924	DDX1	99	98.365	Cercocebus_atys
ENSSTOG00000003977	DDX1	100	98.093	ENSCLAG00000005434	DDX1	99	98.093	Chinchilla_lanigera
ENSSTOG00000003977	DDX1	100	98.365	ENSCSAG00000007883	DDX1	99	98.365	Chlorocebus_sabaeus
ENSSTOG00000003977	DDX1	74	98.337	ENSCHOG00000002171	DDX1	74	98.337	Choloepus_hoffmanni
ENSSTOG00000003977	DDX1	100	87.619	ENSCPBG00000013330	DDX1	99	92.683	Chrysemys_picta_bellii
ENSSTOG00000003977	DDX1	100	65.946	ENSCING00000001176	-	99	65.768	Ciona_intestinalis
ENSSTOG00000003977	DDX1	99	60.440	ENSCSAVG00000003028	-	99	60.440	Ciona_savignyi
ENSSTOG00000003977	DDX1	100	98.229	ENSCANG00000031530	DDX1	100	97.962	Colobus_angolensis_palliatus
ENSSTOG00000003977	DDX1	100	98.638	ENSCGRG00001013025	Ddx1	100	98.370	Cricetulus_griseus_chok1gshd
ENSSTOG00000003977	DDX1	100	98.638	ENSCGRG00000000676	Ddx1	100	98.370	Cricetulus_griseus_crigri
ENSSTOG00000003977	DDX1	100	84.469	ENSCSEG00000002630	ddx1	100	84.469	Cynoglossus_semilaevis
ENSSTOG00000003977	DDX1	100	84.469	ENSCVAG00000020927	ddx1	100	84.469	Cyprinodon_variegatus
ENSSTOG00000003977	DDX1	100	84.605	ENSDARG00000032117	ddx1	100	84.605	Danio_rerio
ENSSTOG00000003977	DDX1	100	98.229	ENSDNOG00000006905	DDX1	99	98.229	Dasypus_novemcinctus
ENSSTOG00000003977	DDX1	100	99.455	ENSDORG00000012847	Ddx1	100	99.185	Dipodomys_ordii
ENSSTOG00000003977	DDX1	98	59.172	FBgn0015075	Ddx1	99	59.534	Drosophila_melanogaster
ENSSTOG00000003977	DDX1	100	86.649	ENSETEG00000014259	DDX1	99	86.649	Echinops_telfairi
ENSSTOG00000003977	DDX1	64	77.966	ENSEBUG00000009800	-	99	77.966	Eptatretus_burgeri
ENSSTOG00000003977	DDX1	100	97.956	ENSEASG00005009335	DDX1	92	97.561	Equus_asinus_asinus
ENSSTOG00000003977	DDX1	95	97.991	ENSECAG00000016396	DDX1	100	97.991	Equus_caballus
ENSSTOG00000003977	DDX1	89	94.539	ENSEEUG00000001606	DDX1	89	94.539	Erinaceus_europaeus
ENSSTOG00000003977	DDX1	100	82.313	ENSELUG00000006743	ddx1	100	82.313	Esox_lucius
ENSSTOG00000003977	DDX1	100	98.774	ENSFCAG00000004680	DDX1	99	98.774	Felis_catus
ENSSTOG00000003977	DDX1	100	92.234	ENSFALG00000008696	DDX1	99	92.234	Ficedula_albicollis
ENSSTOG00000003977	DDX1	100	98.093	ENSFDAG00000021305	DDX1	100	98.098	Fukomys_damarensis
ENSSTOG00000003977	DDX1	100	83.106	ENSFHEG00000008444	ddx1	100	83.106	Fundulus_heteroclitus
ENSSTOG00000003977	DDX1	100	81.275	ENSGMOG00000011300	ddx1	99	81.275	Gadus_morhua
ENSSTOG00000003977	DDX1	100	93.460	ENSGALG00000016461	DDX1	99	93.460	Gallus_gallus
ENSSTOG00000003977	DDX1	100	83.924	ENSGAFG00000004706	ddx1	99	83.924	Gambusia_affinis
ENSSTOG00000003977	DDX1	100	82.153	ENSGACG00000011162	ddx1	99	82.153	Gasterosteus_aculeatus
ENSSTOG00000003977	DDX1	100	93.733	ENSGAGG00000021020	DDX1	99	93.733	Gopherus_agassizii
ENSSTOG00000003977	DDX1	100	98.229	ENSGGOG00000012482	DDX1	99	98.229	Gorilla_gorilla
ENSSTOG00000003977	DDX1	100	84.469	ENSHBUG00000014069	ddx1	99	84.469	Haplochromis_burtoni
ENSSTOG00000003977	DDX1	100	98.093	ENSHGLG00000000801	DDX1	99	98.093	Heterocephalus_glaber_female
ENSSTOG00000003977	DDX1	100	98.093	ENSHGLG00100000711	DDX1	100	98.093	Heterocephalus_glaber_male
ENSSTOG00000003977	DDX1	100	83.924	ENSHCOG00000011492	ddx1	96	83.604	Hippocampus_comes
ENSSTOG00000003977	DDX1	100	82.970	ENSIPUG00000003494	ddx1	99	82.970	Ictalurus_punctatus
ENSSTOG00000003977	DDX1	89	93.893	ENSJJAG00000013315	Ddx1	100	93.893	Jaculus_jaculus
ENSSTOG00000003977	DDX1	100	85.831	ENSKMAG00000011340	ddx1	99	85.831	Kryptolebias_marmoratus
ENSSTOG00000003977	DDX1	89	79.237	ENSLBEG00000008692	ddx1	99	79.237	Labrus_bergylta
ENSSTOG00000003977	DDX1	100	87.466	ENSLACG00000010529	DDX1	99	87.466	Latimeria_chalumnae
ENSSTOG00000003977	DDX1	100	87.891	ENSLOCG00000016473	ddx1	99	87.891	Lepisosteus_oculatus
ENSSTOG00000003977	DDX1	100	97.820	ENSLAFG00000002213	DDX1	99	97.820	Loxodonta_africana
ENSSTOG00000003977	DDX1	100	98.365	ENSMFAG00000033987	DDX1	99	98.365	Macaca_fascicularis
ENSSTOG00000003977	DDX1	100	98.365	ENSMMUG00000023437	DDX1	99	98.365	Macaca_mulatta
ENSSTOG00000003977	DDX1	100	98.365	ENSMNEG00000029189	DDX1	99	98.365	Macaca_nemestrina
ENSSTOG00000003977	DDX1	100	98.229	ENSMLEG00000030787	DDX1	99	98.229	Mandrillus_leucophaeus
ENSSTOG00000003977	DDX1	100	84.741	ENSMAMG00000015916	ddx1	99	84.741	Mastacembelus_armatus
ENSSTOG00000003977	DDX1	100	84.605	ENSMZEG00005015207	ddx1	99	83.639	Maylandia_zebra
ENSSTOG00000003977	DDX1	100	89.295	ENSMGAG00000014025	DDX1	100	89.295	Meleagris_gallopavo
ENSSTOG00000003977	DDX1	64	97.959	ENSMAUG00000016156	Ddx1	99	97.959	Mesocricetus_auratus
ENSSTOG00000003977	DDX1	100	98.774	ENSMICG00000001023	DDX1	99	98.774	Microcebus_murinus
ENSSTOG00000003977	DDX1	100	98.638	ENSMOCG00000000257	Ddx1	99	98.638	Microtus_ochrogaster
ENSSTOG00000003977	DDX1	89	82.927	ENSMMOG00000015397	ddx1	99	82.927	Mola_mola
ENSSTOG00000003977	DDX1	100	95.232	ENSMODG00000010275	DDX1	99	95.232	Monodelphis_domestica
ENSSTOG00000003977	DDX1	100	84.332	ENSMALG00000016409	ddx1	99	84.332	Monopterus_albus
ENSSTOG00000003977	DDX1	100	98.774	MGP_CAROLIEiJ_G0017622	Ddx1	99	98.774	Mus_caroli
ENSSTOG00000003977	DDX1	100	98.093	ENSMUSG00000037149	Ddx1	99	98.093	Mus_musculus
ENSSTOG00000003977	DDX1	100	98.501	MGP_PahariEiJ_G0029378	Ddx1	99	98.501	Mus_pahari
ENSSTOG00000003977	DDX1	100	98.093	MGP_SPRETEiJ_G0018464	Ddx1	99	98.093	Mus_spretus
ENSSTOG00000003977	DDX1	100	98.638	ENSMPUG00000013606	DDX1	99	98.638	Mustela_putorius_furo
ENSSTOG00000003977	DDX1	100	97.820	ENSMLUG00000003027	DDX1	98	97.820	Myotis_lucifugus
ENSSTOG00000003977	DDX1	100	99.046	ENSNGAG00000015783	Ddx1	100	99.046	Nannospalax_galili
ENSSTOG00000003977	DDX1	79	80.104	ENSNBRG00000020677	ddx1	94	80.104	Neolamprologus_brichardi
ENSSTOG00000003977	DDX1	100	98.365	ENSNLEG00000014417	DDX1	99	98.365	Nomascus_leucogenys
ENSSTOG00000003977	DDX1	99	93.297	ENSMEUG00000008254	DDX1	99	93.297	Notamacropus_eugenii
ENSSTOG00000003977	DDX1	92	83.992	ENSOPRG00000004290	DDX1	99	70.163	Ochotona_princeps
ENSSTOG00000003977	DDX1	100	97.956	ENSODEG00000000569	DDX1	99	97.956	Octodon_degus
ENSSTOG00000003977	DDX1	100	85.170	ENSONIG00000000513	ddx1	99	85.170	Oreochromis_niloticus
ENSSTOG00000003977	DDX1	76	93.548	ENSOANG00000005450	DDX1	99	93.548	Ornithorhynchus_anatinus
ENSSTOG00000003977	DDX1	100	98.638	ENSOCUG00000007010	DDX1	99	98.638	Oryctolagus_cuniculus
ENSSTOG00000003977	DDX1	100	84.605	ENSORLG00000016709	ddx1	99	84.605	Oryzias_latipes
ENSSTOG00000003977	DDX1	100	84.469	ENSORLG00020003290	ddx1	100	84.469	Oryzias_latipes_hni
ENSSTOG00000003977	DDX1	100	84.196	ENSORLG00015022438	ddx1	100	84.196	Oryzias_latipes_hsok
ENSSTOG00000003977	DDX1	100	79.837	ENSOMEG00000017620	ddx1	100	78.078	Oryzias_melastigma
ENSSTOG00000003977	DDX1	100	98.098	ENSOGAG00000008730	DDX1	100	98.098	Otolemur_garnettii
ENSSTOG00000003977	DDX1	100	97.418	ENSOARG00000016369	DDX1	100	97.418	Ovis_aries
ENSSTOG00000003977	DDX1	100	98.093	ENSPPAG00000027432	DDX1	99	98.093	Pan_paniscus
ENSSTOG00000003977	DDX1	100	98.774	ENSPPRG00000020556	DDX1	99	98.774	Panthera_pardus
ENSSTOG00000003977	DDX1	100	98.638	ENSPTIG00000008267	DDX1	99	98.638	Panthera_tigris_altaica
ENSSTOG00000003977	DDX1	100	98.093	ENSPTRG00000011670	DDX1	99	98.093	Pan_troglodytes
ENSSTOG00000003977	DDX1	100	98.229	ENSPANG00000025185	DDX1	99	98.229	Papio_anubis
ENSSTOG00000003977	DDX1	100	84.060	ENSPKIG00000012466	ddx1	100	84.060	Paramormyrops_kingsleyae
ENSSTOG00000003977	DDX1	54	91.184	ENSPSIG00000012292	DDX1	99	91.184	Pelodiscus_sinensis
ENSSTOG00000003977	DDX1	100	82.289	ENSPMGG00000000782	ddx1	100	80.514	Periophthalmus_magnuspinnatus
ENSSTOG00000003977	DDX1	100	98.093	ENSPEMG00000016389	Ddx1	100	97.826	Peromyscus_maniculatus_bairdii
ENSSTOG00000003977	DDX1	100	79.755	ENSPMAG00000009118	-	100	79.755	Petromyzon_marinus
ENSSTOG00000003977	DDX1	100	95.913	ENSPCIG00000010941	DDX1	99	95.913	Phascolarctos_cinereus
ENSSTOG00000003977	DDX1	100	84.060	ENSPFOG00000011921	ddx1	99	84.060	Poecilia_formosa
ENSSTOG00000003977	DDX1	87	82.737	ENSPFOG00000006873	-	100	82.737	Poecilia_formosa
ENSSTOG00000003977	DDX1	100	84.060	ENSPLAG00000005939	ddx1	99	84.060	Poecilia_latipinna
ENSSTOG00000003977	DDX1	100	84.332	ENSPMEG00000011140	ddx1	99	84.332	Poecilia_mexicana
ENSSTOG00000003977	DDX1	100	83.924	ENSPREG00000011751	ddx1	99	83.924	Poecilia_reticulata
ENSSTOG00000003977	DDX1	100	98.229	ENSPPYG00000012638	DDX1	99	98.229	Pongo_abelii
ENSSTOG00000003977	DDX1	100	83.787	ENSPCAG00000001491	DDX1	99	83.787	Procavia_capensis
ENSSTOG00000003977	DDX1	100	96.185	ENSPCOG00000028185	DDX1	100	95.924	Propithecus_coquereli
ENSSTOG00000003977	DDX1	100	97.820	ENSPVAG00000013618	DDX1	99	97.820	Pteropus_vampyrus
ENSSTOG00000003977	DDX1	100	84.469	ENSPNYG00000013839	ddx1	100	83.644	Pundamilia_nyererei
ENSSTOG00000003977	DDX1	89	83.511	ENSPNAG00000017033	ddx1	97	83.511	Pygocentrus_nattereri
ENSSTOG00000003977	DDX1	100	98.638	ENSRNOG00000006652	Ddx1	99	98.638	Rattus_norvegicus
ENSSTOG00000003977	DDX1	100	97.139	ENSRBIG00000041664	DDX1	99	97.577	Rhinopithecus_bieti
ENSSTOG00000003977	DDX1	100	97.956	ENSRROG00000031167	DDX1	99	97.956	Rhinopithecus_roxellana
ENSSTOG00000003977	DDX1	100	98.638	ENSSBOG00000027577	DDX1	100	98.370	Saimiri_boliviensis_boliviensis
ENSSTOG00000003977	DDX1	100	87.466	ENSSHAG00000009363	DDX1	99	87.466	Sarcophilus_harrisii
ENSSTOG00000003977	DDX1	100	83.379	ENSSFOG00015014476	ddx1	99	83.379	Scleropages_formosus
ENSSTOG00000003977	DDX1	100	82.834	ENSSMAG00000010094	ddx1	99	82.834	Scophthalmus_maximus
ENSSTOG00000003977	DDX1	100	84.469	ENSSDUG00000012334	ddx1	99	84.469	Seriola_dumerili
ENSSTOG00000003977	DDX1	100	84.060	ENSSLDG00000025345	ddx1	99	84.060	Seriola_lalandi_dorsalis
ENSSTOG00000003977	DDX1	100	86.921	ENSSARG00000004536	DDX1	100	86.921	Sorex_araneus
ENSSTOG00000003977	DDX1	100	90.872	ENSSPUG00000018835	DDX1	99	90.872	Sphenodon_punctatus
ENSSTOG00000003977	DDX1	100	79.837	ENSSPAG00000023554	ddx1	99	79.837	Stegastes_partitus
ENSSTOG00000003977	DDX1	100	97.684	ENSSSCG00000008619	DDX1	99	97.684	Sus_scrofa
ENSSTOG00000003977	DDX1	100	92.779	ENSTGUG00000013096	DDX1	99	92.779	Taeniopygia_guttata
ENSSTOG00000003977	DDX1	100	83.651	ENSTRUG00000015765	ddx1	100	83.356	Takifugu_rubripes
ENSSTOG00000003977	DDX1	100	84.060	ENSTNIG00000016309	ddx1	99	84.060	Tetraodon_nigroviridis
ENSSTOG00000003977	DDX1	100	94.278	ENSTBEG00000008454	DDX1	100	94.278	Tupaia_belangeri
ENSSTOG00000003977	DDX1	100	97.139	ENSTTRG00000005081	DDX1	99	97.139	Tursiops_truncatus
ENSSTOG00000003977	DDX1	71	85.277	ENSUAMG00000017375	DDX1	92	85.115	Ursus_americanus
ENSSTOG00000003977	DDX1	100	98.638	ENSUMAG00000023450	DDX1	100	98.638	Ursus_maritimus
ENSSTOG00000003977	DDX1	85	98.100	ENSVPAG00000007764	DDX1	85	98.100	Vicugna_pacos
ENSSTOG00000003977	DDX1	100	98.365	ENSVVUG00000013085	DDX1	96	98.365	Vulpes_vulpes
ENSSTOG00000003977	DDX1	100	90.054	ENSXETG00000017825	ddx1	99	90.054	Xenopus_tropicalis
ENSSTOG00000003977	DDX1	100	81.107	ENSXCOG00000007082	ddx1	99	81.107	Xiphophorus_couchianus
ENSSTOG00000003977	DDX1	100	83.651	ENSXMAG00000004555	ddx1	99	83.651	Xiphophorus_maculatus