EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000004219 (Gene tree)
Gene ID: 101968127
Gene Symbol: DDX23
Alias: PRPF28|SNRNP100|U5-100K|prp28
Full Name: DEAD-box helicase 23
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 15915 bases
Position: chrJH393322.1:6666814-6682728
Accession: 101968127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000003802	DEAD	PF00270.29	1.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000004235	DDX23-201	3547	XM_005324892	ENSSTOP00000003802	820 (aa)	XP_005324949	I3M3V4

Gene Model

Click here to download ENSSTOG00000004219's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004219's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000004219	DDX23	54	39.414	ENSSTOG00000027719	-	55	39.414
ENSSTOG00000004219	DDX23	50	38.443	ENSSTOG00000008094	DDX3X	61	37.753
ENSSTOG00000004219	DDX23	54	34.598	ENSSTOG00000032538	-	70	34.598
ENSSTOG00000004219	DDX23	51	37.529	ENSSTOG00000012526	DDX5	65	37.529
ENSSTOG00000004219	DDX23	52	40.138	ENSSTOG00000003171	DDX41	76	37.426
ENSSTOG00000004219	DDX23	50	30.900	ENSSTOG00000012601	-	92	30.900
ENSSTOG00000004219	DDX23	51	31.175	ENSSTOG00000014475	DDX6	77	31.159
ENSSTOG00000004219	DDX23	52	31.713	ENSSTOG00000027030	DDX59	63	31.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000004219	DDX23	100	99.512	ENSG00000174243	DDX23	100	99.512	Homo_sapiens
ENSSTOG00000004219	DDX23	100	84.204	ENSAPOG00000003760	ddx23	100	84.727	Acanthochromis_polyacanthus
ENSSTOG00000004219	DDX23	100	99.390	ENSAMEG00000007123	DDX23	100	99.390	Ailuropoda_melanoleuca
ENSSTOG00000004219	DDX23	100	80.244	ENSACIG00000000022	ddx23	100	80.999	Amphilophus_citrinellus
ENSSTOG00000004219	DDX23	100	84.204	ENSAOCG00000017348	ddx23	100	84.727	Amphiprion_ocellaris
ENSSTOG00000004219	DDX23	100	84.653	ENSAPEG00000016857	ddx23	100	83.942	Amphiprion_percula
ENSSTOG00000004219	DDX23	100	84.812	ENSATEG00000016800	ddx23	100	84.970	Anabas_testudineus
ENSSTOG00000004219	DDX23	99	81.807	ENSAPLG00000002868	DDX23	99	83.735	Anas_platyrhynchos
ENSSTOG00000004219	DDX23	100	93.301	ENSACAG00000025589	DDX23	96	93.423	Anolis_carolinensis
ENSSTOG00000004219	DDX23	100	99.756	ENSANAG00000018663	DDX23	100	99.756	Aotus_nancymaae
ENSSTOG00000004219	DDX23	92	88.181	ENSAMXG00000017597	ddx23	100	85.262	Astyanax_mexicanus
ENSSTOG00000004219	DDX23	100	99.146	ENSBTAG00000021810	DDX23	100	99.146	Bos_taurus
ENSSTOG00000004219	DDX23	71	67.642	WBGene00017162	ddx-23	79	67.642	Caenorhabditis_elegans
ENSSTOG00000004219	DDX23	100	99.634	ENSCJAG00000020775	DDX23	100	99.634	Callithrix_jacchus
ENSSTOG00000004219	DDX23	100	99.634	ENSCAFG00000025422	DDX23	100	99.634	Canis_familiaris
ENSSTOG00000004219	DDX23	100	99.634	ENSCAFG00020013383	DDX23	100	99.634	Canis_lupus_dingo
ENSSTOG00000004219	DDX23	100	99.024	ENSCHIG00000018783	DDX23	100	99.024	Capra_hircus
ENSSTOG00000004219	DDX23	100	99.146	ENSTSYG00000005429	DDX23	100	99.146	Carlito_syrichta
ENSSTOG00000004219	DDX23	100	99.390	ENSCPOG00000003278	DDX23	100	99.390	Cavia_porcellus
ENSSTOG00000004219	DDX23	89	100.000	ENSCCAG00000029177	DDX23	100	100.000	Cebus_capucinus
ENSSTOG00000004219	DDX23	100	83.049	ENSCATG00000032335	-	100	83.049	Cercocebus_atys
ENSSTOG00000004219	DDX23	100	99.390	ENSCATG00000039797	DDX23	100	99.390	Cercocebus_atys
ENSSTOG00000004219	DDX23	100	99.390	ENSCLAG00000002986	DDX23	100	99.390	Chinchilla_lanigera
ENSSTOG00000004219	DDX23	100	99.390	ENSCSAG00000006240	DDX23	100	99.390	Chlorocebus_sabaeus
ENSSTOG00000004219	DDX23	84	99.273	ENSCHOG00000009027	DDX23	100	99.273	Choloepus_hoffmanni
ENSSTOG00000004219	DDX23	100	92.457	ENSCPBG00000019988	DDX23	100	92.092	Chrysemys_picta_bellii
ENSSTOG00000004219	DDX23	93	69.843	ENSCING00000001913	-	97	69.933	Ciona_intestinalis
ENSSTOG00000004219	DDX23	83	67.496	ENSCSAVG00000004158	-	100	67.496	Ciona_savignyi
ENSSTOG00000004219	DDX23	100	79.415	ENSCANG00000042510	-	100	78.441	Colobus_angolensis_palliatus
ENSSTOG00000004219	DDX23	87	99.719	ENSCANG00000040182	DDX23	100	99.719	Colobus_angolensis_palliatus
ENSSTOG00000004219	DDX23	100	99.146	ENSCGRG00001015090	Ddx23	100	99.146	Cricetulus_griseus_chok1gshd
ENSSTOG00000004219	DDX23	100	99.146	ENSCGRG00000016314	Ddx23	100	99.146	Cricetulus_griseus_crigri
ENSSTOG00000004219	DDX23	83	91.202	ENSCSEG00000020970	ddx23	94	86.755	Cynoglossus_semilaevis
ENSSTOG00000004219	DDX23	100	84.709	ENSCVAG00000015745	ddx23	93	89.530	Cyprinodon_variegatus
ENSSTOG00000004219	DDX23	83	92.070	ENSDARG00000021945	ddx23	92	88.410	Danio_rerio
ENSSTOG00000004219	DDX23	100	99.512	ENSDNOG00000043176	DDX23	100	99.512	Dasypus_novemcinctus
ENSSTOG00000004219	DDX23	100	99.512	ENSDORG00000012659	Ddx23	100	99.512	Dipodomys_ordii
ENSSTOG00000004219	DDX23	85	70.464	FBgn0032690	CG10333	94	66.451	Drosophila_melanogaster
ENSSTOG00000004219	DDX23	99	95.443	ENSETEG00000015816	DDX23	99	95.443	Echinops_telfairi
ENSSTOG00000004219	DDX23	81	82.556	ENSEBUG00000003319	ddx23	93	82.727	Eptatretus_burgeri
ENSSTOG00000004219	DDX23	100	99.268	ENSEASG00005000455	DDX23	100	99.268	Equus_asinus_asinus
ENSSTOG00000004219	DDX23	100	99.390	ENSECAG00000016681	DDX23	100	99.390	Equus_caballus
ENSSTOG00000004219	DDX23	100	90.998	ENSEEUG00000009658	DDX23	100	90.998	Erinaceus_europaeus
ENSSTOG00000004219	DDX23	100	82.446	ENSELUG00000015358	ddx23	96	86.523	Esox_lucius
ENSSTOG00000004219	DDX23	100	99.756	ENSFCAG00000000082	DDX23	100	99.756	Felis_catus
ENSSTOG00000004219	DDX23	100	91.971	ENSFALG00000000133	DDX23	100	90.998	Ficedula_albicollis
ENSSTOG00000004219	DDX23	100	99.390	ENSFDAG00000017059	DDX23	100	99.390	Fukomys_damarensis
ENSSTOG00000004219	DDX23	100	83.698	ENSFHEG00000017499	ddx23	90	91.818	Fundulus_heteroclitus
ENSSTOG00000004219	DDX23	95	83.949	ENSGMOG00000009592	ddx23	93	86.062	Gadus_morhua
ENSSTOG00000004219	DDX23	100	95.128	ENSGALG00000032307	DDX23	100	93.057	Gallus_gallus
ENSSTOG00000004219	DDX23	95	86.115	ENSGAFG00000012366	ddx23	92	89.276	Gambusia_affinis
ENSSTOG00000004219	DDX23	94	86.328	ENSGACG00000003024	ddx23	99	92.114	Gasterosteus_aculeatus
ENSSTOG00000004219	DDX23	100	92.336	ENSGAGG00000007790	DDX23	100	91.971	Gopherus_agassizii
ENSSTOG00000004219	DDX23	100	99.512	ENSGGOG00000015252	DDX23	100	100.000	Gorilla_gorilla
ENSSTOG00000004219	DDX23	100	84.166	ENSHBUG00000011876	ddx23	100	85.212	Haplochromis_burtoni
ENSSTOG00000004219	DDX23	100	99.268	ENSHGLG00000004292	DDX23	100	99.268	Heterocephalus_glaber_female
ENSSTOG00000004219	DDX23	100	99.268	ENSHGLG00100017585	DDX23	100	99.268	Heterocephalus_glaber_male
ENSSTOG00000004219	DDX23	83	92.082	ENSHCOG00000019338	ddx23	93	88.740	Hippocampus_comes
ENSSTOG00000004219	DDX23	92	87.118	ENSIPUG00000005247	DDX23	100	84.364	Ictalurus_punctatus
ENSSTOG00000004219	DDX23	100	99.146	ENSJJAG00000018994	Ddx23	100	99.146	Jaculus_jaculus
ENSSTOG00000004219	DDX23	95	85.069	ENSKMAG00000012060	ddx23	100	84.000	Kryptolebias_marmoratus
ENSSTOG00000004219	DDX23	93	87.630	ENSLBEG00000019475	ddx23	92	88.560	Labrus_bergylta
ENSSTOG00000004219	DDX23	92	92.410	ENSLACG00000016977	DDX23	99	92.848	Latimeria_chalumnae
ENSSTOG00000004219	DDX23	88	90.096	ENSLOCG00000007385	ddx23	100	86.740	Lepisosteus_oculatus
ENSSTOG00000004219	DDX23	100	99.268	ENSLAFG00000014227	DDX23	100	99.268	Loxodonta_africana
ENSSTOG00000004219	DDX23	100	99.390	ENSMFAG00000038666	DDX23	100	99.390	Macaca_fascicularis
ENSSTOG00000004219	DDX23	100	99.390	ENSMMUG00000008432	DDX23	100	100.000	Macaca_mulatta
ENSSTOG00000004219	DDX23	100	82.561	ENSMNEG00000045260	-	100	82.561	Macaca_nemestrina
ENSSTOG00000004219	DDX23	100	99.146	ENSMNEG00000040016	DDX23	100	99.146	Macaca_nemestrina
ENSSTOG00000004219	DDX23	100	99.390	ENSMLEG00000042846	DDX23	100	99.390	Mandrillus_leucophaeus
ENSSTOG00000004219	DDX23	100	80.610	ENSMLEG00000035096	-	100	80.610	Mandrillus_leucophaeus
ENSSTOG00000004219	DDX23	100	83.859	ENSMAMG00000024144	ddx23	100	84.915	Mastacembelus_armatus
ENSSTOG00000004219	DDX23	100	83.922	ENSMZEG00005026086	ddx23	100	84.970	Maylandia_zebra
ENSSTOG00000004219	DDX23	100	98.780	ENSMAUG00000012336	Ddx23	100	98.780	Mesocricetus_auratus
ENSSTOG00000004219	DDX23	100	99.146	ENSMICG00000017541	DDX23	100	99.146	Microcebus_murinus
ENSSTOG00000004219	DDX23	100	98.415	ENSMOCG00000018987	Ddx23	100	98.415	Microtus_ochrogaster
ENSSTOG00000004219	DDX23	95	81.354	ENSMMOG00000012406	ddx23	93	83.356	Mola_mola
ENSSTOG00000004219	DDX23	100	98.293	ENSMODG00000009975	DDX23	100	98.293	Monodelphis_domestica
ENSSTOG00000004219	DDX23	100	83.577	ENSMALG00000022366	ddx23	100	83.718	Monopterus_albus
ENSSTOG00000004219	DDX23	100	98.293	MGP_CAROLIEiJ_G0020240	Ddx23	100	98.293	Mus_caroli
ENSSTOG00000004219	DDX23	100	98.415	ENSMUSG00000003360	Ddx23	100	98.415	Mus_musculus
ENSSTOG00000004219	DDX23	100	98.293	MGP_PahariEiJ_G0020243	Ddx23	100	98.293	Mus_pahari
ENSSTOG00000004219	DDX23	100	98.415	MGP_SPRETEiJ_G0021137	Ddx23	100	98.415	Mus_spretus
ENSSTOG00000004219	DDX23	100	99.512	ENSMPUG00000014739	DDX23	100	99.512	Mustela_putorius_furo
ENSSTOG00000004219	DDX23	100	94.512	ENSMLUG00000003683	-	100	94.512	Myotis_lucifugus
ENSSTOG00000004219	DDX23	100	98.902	ENSMLUG00000011033	-	100	98.902	Myotis_lucifugus
ENSSTOG00000004219	DDX23	100	98.780	ENSNGAG00000019018	Ddx23	100	98.780	Nannospalax_galili
ENSSTOG00000004219	DDX23	83	92.826	ENSNBRG00000022928	ddx23	100	82.298	Neolamprologus_brichardi
ENSSTOG00000004219	DDX23	100	92.439	ENSNLEG00000017864	DDX23	100	92.439	Nomascus_leucogenys
ENSSTOG00000004219	DDX23	100	98.049	ENSMEUG00000009477	DDX23	100	98.049	Notamacropus_eugenii
ENSSTOG00000004219	DDX23	100	98.780	ENSOPRG00000007170	-	100	98.780	Ochotona_princeps
ENSSTOG00000004219	DDX23	100	99.268	ENSODEG00000003592	DDX23	100	99.268	Octodon_degus
ENSSTOG00000004219	DDX23	100	83.922	ENSONIG00000017048	ddx23	100	84.988	Oreochromis_niloticus
ENSSTOG00000004219	DDX23	100	98.659	ENSOCUG00000001414	DDX23	100	98.659	Oryctolagus_cuniculus
ENSSTOG00000004219	DDX23	100	82.439	ENSORLG00000012330	ddx23	100	82.826	Oryzias_latipes
ENSSTOG00000004219	DDX23	100	82.561	ENSORLG00020017586	ddx23	100	82.948	Oryzias_latipes_hni
ENSSTOG00000004219	DDX23	81	91.528	ENSORLG00015012361	ddx23	88	91.667	Oryzias_latipes_hsok
ENSSTOG00000004219	DDX23	100	84.951	ENSOMEG00000006453	ddx23	92	89.204	Oryzias_melastigma
ENSSTOG00000004219	DDX23	100	99.634	ENSOGAG00000016813	DDX23	100	99.634	Otolemur_garnettii
ENSSTOG00000004219	DDX23	100	99.024	ENSOARG00000019105	DDX23	90	99.024	Ovis_aries
ENSSTOG00000004219	DDX23	100	72.107	ENSPPAG00000038775	-	100	70.976	Pan_paniscus
ENSSTOG00000004219	DDX23	100	99.512	ENSPPAG00000037807	DDX23	100	100.000	Pan_paniscus
ENSSTOG00000004219	DDX23	100	99.756	ENSPPRG00000015345	DDX23	100	99.756	Panthera_pardus
ENSSTOG00000004219	DDX23	100	99.756	ENSPTIG00000018873	DDX23	100	99.756	Panthera_tigris_altaica
ENSSTOG00000004219	DDX23	100	99.390	ENSPTRG00000004887	DDX23	100	100.000	Pan_troglodytes
ENSSTOG00000004219	DDX23	100	75.854	ENSPTRG00000051972	-	100	75.366	Pan_troglodytes
ENSSTOG00000004219	DDX23	93	86.038	ENSPANG00000035074	-	100	86.038	Papio_anubis
ENSSTOG00000004219	DDX23	100	99.390	ENSPANG00000019459	DDX23	92	99.390	Papio_anubis
ENSSTOG00000004219	DDX23	89	89.026	ENSPKIG00000024110	ddx23	100	85.784	Paramormyrops_kingsleyae
ENSSTOG00000004219	DDX23	100	80.779	ENSPSIG00000002834	DDX23	100	80.900	Pelodiscus_sinensis
ENSSTOG00000004219	DDX23	100	78.443	ENSPMGG00000010243	ddx23	98	84.238	Periophthalmus_magnuspinnatus
ENSSTOG00000004219	DDX23	100	98.780	ENSPEMG00000011305	Ddx23	100	98.780	Peromyscus_maniculatus_bairdii
ENSSTOG00000004219	DDX23	83	84.919	ENSPMAG00000008625	ddx23	99	81.292	Petromyzon_marinus
ENSSTOG00000004219	DDX23	100	97.927	ENSPCIG00000027691	DDX23	100	97.927	Phascolarctos_cinereus
ENSSTOG00000004219	DDX23	95	85.071	ENSPFOG00000012159	ddx23	92	89.664	Poecilia_formosa
ENSSTOG00000004219	DDX23	95	86.358	ENSPLAG00000005052	ddx23	92	89.664	Poecilia_latipinna
ENSSTOG00000004219	DDX23	95	86.079	ENSPMEG00000015385	ddx23	92	89.664	Poecilia_mexicana
ENSSTOG00000004219	DDX23	95	86.785	ENSPREG00000007074	ddx23	92	89.637	Poecilia_reticulata
ENSSTOG00000004219	DDX23	100	99.512	ENSPPYG00000004468	DDX23	97	99.512	Pongo_abelii
ENSSTOG00000004219	DDX23	100	94.756	ENSPCAG00000002016	DDX23	100	94.756	Procavia_capensis
ENSSTOG00000004219	DDX23	100	99.512	ENSPCOG00000025915	DDX23	100	100.000	Propithecus_coquereli
ENSSTOG00000004219	DDX23	100	99.634	ENSPVAG00000009818	DDX23	100	99.634	Pteropus_vampyrus
ENSSTOG00000004219	DDX23	100	80.244	ENSPNYG00000021038	ddx23	100	81.616	Pundamilia_nyererei
ENSSTOG00000004219	DDX23	82	90.963	ENSPNAG00000019203	ddx23	89	92.121	Pygocentrus_nattereri
ENSSTOG00000004219	DDX23	100	98.537	ENSRNOG00000060154	Ddx23	100	98.537	Rattus_norvegicus
ENSSTOG00000004219	DDX23	100	86.463	ENSRBIG00000040362	DDX23	100	86.463	Rhinopithecus_bieti
ENSSTOG00000004219	DDX23	100	80.488	ENSRBIG00000036337	-	100	80.244	Rhinopithecus_bieti
ENSSTOG00000004219	DDX23	100	99.512	ENSRROG00000028964	DDX23	100	99.512	Rhinopithecus_roxellana
ENSSTOG00000004219	DDX23	100	77.927	ENSRROG00000045747	-	100	78.659	Rhinopithecus_roxellana
ENSSTOG00000004219	DDX23	70	37.245	YDR243C	-	81	38.848	Saccharomyces_cerevisiae
ENSSTOG00000004219	DDX23	100	99.512	ENSSBOG00000025799	DDX23	100	99.512	Saimiri_boliviensis_boliviensis
ENSSTOG00000004219	DDX23	100	98.049	ENSSHAG00000006590	DDX23	100	98.049	Sarcophilus_harrisii
ENSSTOG00000004219	DDX23	88	89.793	ENSSFOG00015013273	ddx23	100	86.496	Scleropages_formosus
ENSSTOG00000004219	DDX23	100	82.830	ENSSMAG00000000529	ddx23	93	87.316	Scophthalmus_maximus
ENSSTOG00000004219	DDX23	100	84.550	ENSSDUG00000022459	ddx23	100	85.351	Seriola_dumerili
ENSSTOG00000004219	DDX23	100	84.550	ENSSLDG00000010453	ddx23	100	85.230	Seriola_lalandi_dorsalis
ENSSTOG00000004219	DDX23	93	100.000	ENSSARG00000004534	DDX23	93	100.000	Sorex_araneus
ENSSTOG00000004219	DDX23	100	94.897	ENSSPUG00000016044	DDX23	100	93.796	Sphenodon_punctatus
ENSSTOG00000004219	DDX23	86	90.665	ENSSPAG00000016482	ddx23	100	84.364	Stegastes_partitus
ENSSTOG00000004219	DDX23	100	99.268	ENSSSCG00000000176	DDX23	100	99.268	Sus_scrofa
ENSSTOG00000004219	DDX23	96	83.842	ENSTRUG00000000455	ddx23	93	87.314	Takifugu_rubripes
ENSSTOG00000004219	DDX23	100	95.122	ENSTBEG00000016909	DDX23	100	95.122	Tupaia_belangeri
ENSSTOG00000004219	DDX23	100	93.049	ENSTTRG00000004604	DDX23	100	93.049	Tursiops_truncatus
ENSSTOG00000004219	DDX23	100	99.512	ENSUAMG00000027082	DDX23	100	99.512	Ursus_americanus
ENSSTOG00000004219	DDX23	100	99.512	ENSUMAG00000006538	DDX23	100	99.512	Ursus_maritimus
ENSSTOG00000004219	DDX23	100	99.634	ENSVVUG00000019648	DDX23	100	99.634	Vulpes_vulpes
ENSSTOG00000004219	DDX23	100	85.244	ENSXETG00000009807	ddx23	100	84.878	Xenopus_tropicalis
ENSSTOG00000004219	DDX23	95	83.908	ENSXCOG00000011648	ddx23	93	88.227	Xiphophorus_couchianus
ENSSTOG00000004219	DDX23	95	86.497	ENSXMAG00000017387	ddx23	92	89.678	Xiphophorus_maculatus