EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000004276 (Gene tree)
Gene ID: 101971116
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 3135 bases
Position: chrJH393311.1:241232-244366
Accession: 101971116
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000003835	PseudoU_synth_2	PF00849.22	6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000004270	RPUSD1-201	2338	XM_005323634	ENSSTOP00000003835	306 (aa)	XP_005323691	I3M3Y0

Gene Model

Click here to download ENSSTOG00000004276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000004276	RPUSD1	100	85.256	ENSG00000007376	RPUSD1	100	89.286	Homo_sapiens
ENSSTOG00000004276	RPUSD1	98	56.954	ENSAPOG00000022221	rpusd1	98	56.954	Acanthochromis_polyacanthus
ENSSTOG00000004276	RPUSD1	100	83.007	ENSAMEG00000007461	RPUSD1	100	83.007	Ailuropoda_melanoleuca
ENSSTOG00000004276	RPUSD1	98	58.170	ENSACIG00000015863	rpusd1	98	58.170	Amphilophus_citrinellus
ENSSTOG00000004276	RPUSD1	98	56.066	ENSAOCG00000021975	rpusd1	95	56.066	Amphiprion_ocellaris
ENSSTOG00000004276	RPUSD1	98	56.393	ENSAPEG00000001316	rpusd1	95	56.393	Amphiprion_percula
ENSSTOG00000004276	RPUSD1	83	64.427	ENSATEG00000002984	rpusd1	98	57.705	Anabas_testudineus
ENSSTOG00000004276	RPUSD1	78	59.919	ENSAPLG00000012316	RPUSD1	99	59.919	Anas_platyrhynchos
ENSSTOG00000004276	RPUSD1	99	66.993	ENSACAG00000008953	RPUSD1	100	66.993	Anolis_carolinensis
ENSSTOG00000004276	RPUSD1	100	86.218	ENSANAG00000024709	RPUSD1	100	87.821	Aotus_nancymaae
ENSSTOG00000004276	RPUSD1	98	56.688	ENSACLG00000013692	rpusd1	98	58.306	Astatotilapia_calliptera
ENSSTOG00000004276	RPUSD1	99	59.736	ENSAMXG00000019802	rpusd1	100	59.736	Astyanax_mexicanus
ENSSTOG00000004276	RPUSD1	100	88.636	ENSBTAG00000000179	RPUSD1	100	89.935	Bos_taurus
ENSSTOG00000004276	RPUSD1	100	86.218	ENSCJAG00000012253	RPUSD1	100	86.859	Callithrix_jacchus
ENSSTOG00000004276	RPUSD1	100	83.333	ENSCAFG00000019614	RPUSD1	100	83.987	Canis_familiaris
ENSSTOG00000004276	RPUSD1	100	83.333	ENSCAFG00020008891	RPUSD1	100	83.987	Canis_lupus_dingo
ENSSTOG00000004276	RPUSD1	100	87.338	ENSCHIG00000012872	RPUSD1	100	88.636	Capra_hircus
ENSSTOG00000004276	RPUSD1	100	86.601	ENSTSYG00000036934	RPUSD1	100	86.601	Carlito_syrichta
ENSSTOG00000004276	RPUSD1	100	89.542	ENSCAPG00000014219	RPUSD1	100	89.542	Cavia_aperea
ENSSTOG00000004276	RPUSD1	100	89.542	ENSCPOG00000034604	RPUSD1	100	89.542	Cavia_porcellus
ENSSTOG00000004276	RPUSD1	100	87.179	ENSCCAG00000034385	RPUSD1	100	87.821	Cebus_capucinus
ENSSTOG00000004276	RPUSD1	100	87.179	ENSCATG00000042983	RPUSD1	100	87.821	Cercocebus_atys
ENSSTOG00000004276	RPUSD1	100	89.542	ENSCLAG00000013966	RPUSD1	100	89.542	Chinchilla_lanigera
ENSSTOG00000004276	RPUSD1	100	87.179	ENSCSAG00000012121	RPUSD1	100	87.821	Chlorocebus_sabaeus
ENSSTOG00000004276	RPUSD1	99	65.260	ENSCPBG00000021101	RPUSD1	99	65.260	Chrysemys_picta_bellii
ENSSTOG00000004276	RPUSD1	92	89.680	ENSCANG00000028576	RPUSD1	100	89.680	Colobus_angolensis_palliatus
ENSSTOG00000004276	RPUSD1	100	87.255	ENSCGRG00001014253	Rpusd1	100	87.255	Cricetulus_griseus_chok1gshd
ENSSTOG00000004276	RPUSD1	100	87.255	ENSCGRG00000017995	Rpusd1	100	87.255	Cricetulus_griseus_crigri
ENSSTOG00000004276	RPUSD1	99	56.209	ENSCSEG00000018512	rpusd1	100	56.209	Cynoglossus_semilaevis
ENSSTOG00000004276	RPUSD1	98	55.776	ENSCVAG00000022746	rpusd1	98	55.776	Cyprinodon_variegatus
ENSSTOG00000004276	RPUSD1	99	60.855	ENSDARG00000060192	rpusd1	100	60.855	Danio_rerio
ENSSTOG00000004276	RPUSD1	100	81.731	ENSDNOG00000003721	RPUSD1	100	82.372	Dasypus_novemcinctus
ENSSTOG00000004276	RPUSD1	100	90.196	ENSDORG00000026656	Rpusd1	100	90.850	Dipodomys_ordii
ENSSTOG00000004276	RPUSD1	99	46.082	ENSEBUG00000008767	rpusd1	94	46.082	Eptatretus_burgeri
ENSSTOG00000004276	RPUSD1	100	84.494	ENSEASG00005018421	RPUSD1	76	85.759	Equus_asinus_asinus
ENSSTOG00000004276	RPUSD1	83	61.417	ENSELUG00000014307	rpusd1	88	55.738	Esox_lucius
ENSSTOG00000004276	RPUSD1	100	83.660	ENSFCAG00000010359	RPUSD1	100	83.660	Felis_catus
ENSSTOG00000004276	RPUSD1	99	67.541	ENSFALG00000003211	RPUSD1	100	67.541	Ficedula_albicollis
ENSSTOG00000004276	RPUSD1	100	89.216	ENSFDAG00000013398	RPUSD1	100	89.216	Fukomys_damarensis
ENSSTOG00000004276	RPUSD1	98	55.776	ENSFHEG00000004736	rpusd1	98	55.776	Fundulus_heteroclitus
ENSSTOG00000004276	RPUSD1	98	55.921	ENSGMOG00000010756	rpusd1	98	56.579	Gadus_morhua
ENSSTOG00000004276	RPUSD1	99	64.217	ENSGALG00000005315	RPUSD1	100	64.217	Gallus_gallus
ENSSTOG00000004276	RPUSD1	98	57.000	ENSGAFG00000009886	rpusd1	98	57.000	Gambusia_affinis
ENSSTOG00000004276	RPUSD1	82	64.542	ENSGACG00000014276	rpusd1	97	57.566	Gasterosteus_aculeatus
ENSSTOG00000004276	RPUSD1	99	65.246	ENSGAGG00000004181	RPUSD1	99	65.246	Gopherus_agassizii
ENSSTOG00000004276	RPUSD1	100	84.936	ENSGGOG00000013997	RPUSD1	100	85.577	Gorilla_gorilla
ENSSTOG00000004276	RPUSD1	98	56.369	ENSHBUG00000023728	rpusd1	98	57.980	Haplochromis_burtoni
ENSSTOG00000004276	RPUSD1	100	88.562	ENSHGLG00000002595	RPUSD1	100	88.562	Heterocephalus_glaber_female
ENSSTOG00000004276	RPUSD1	100	88.562	ENSHGLG00100014303	RPUSD1	100	88.562	Heterocephalus_glaber_male
ENSSTOG00000004276	RPUSD1	98	59.539	ENSHCOG00000002390	rpusd1	99	59.539	Hippocampus_comes
ENSSTOG00000004276	RPUSD1	99	61.716	ENSIPUG00000001570	rpusd1	99	61.716	Ictalurus_punctatus
ENSSTOG00000004276	RPUSD1	100	89.542	ENSJJAG00000015696	Rpusd1	100	89.542	Jaculus_jaculus
ENSSTOG00000004276	RPUSD1	98	57.000	ENSKMAG00000017287	rpusd1	98	57.000	Kryptolebias_marmoratus
ENSSTOG00000004276	RPUSD1	98	57.705	ENSLBEG00000013354	RPUSD1	98	58.361	Labrus_bergylta
ENSSTOG00000004276	RPUSD1	98	57.705	ENSLBEG00000022502	rpusd1	98	58.361	Labrus_bergylta
ENSSTOG00000004276	RPUSD1	99	63.245	ENSLACG00000008869	RPUSD1	99	63.245	Latimeria_chalumnae
ENSSTOG00000004276	RPUSD1	71	73.148	ENSLOCG00000005682	rpusd1	99	73.148	Lepisosteus_oculatus
ENSSTOG00000004276	RPUSD1	100	81.046	ENSLAFG00000002115	RPUSD1	100	81.046	Loxodonta_africana
ENSSTOG00000004276	RPUSD1	100	87.500	ENSMFAG00000003961	RPUSD1	100	88.141	Macaca_fascicularis
ENSSTOG00000004276	RPUSD1	100	87.500	ENSMMUG00000000842	RPUSD1	100	88.141	Macaca_mulatta
ENSSTOG00000004276	RPUSD1	100	87.500	ENSMNEG00000042712	RPUSD1	100	88.141	Macaca_nemestrina
ENSSTOG00000004276	RPUSD1	100	87.500	ENSMLEG00000030591	RPUSD1	100	88.141	Mandrillus_leucophaeus
ENSSTOG00000004276	RPUSD1	83	64.427	ENSMAMG00000004735	rpusd1	98	57.843	Mastacembelus_armatus
ENSSTOG00000004276	RPUSD1	98	56.688	ENSMZEG00005003214	rpusd1	98	58.306	Maylandia_zebra
ENSSTOG00000004276	RPUSD1	97	64.784	ENSMGAG00000005447	RPUSD1	99	64.784	Meleagris_gallopavo
ENSSTOG00000004276	RPUSD1	86	81.298	ENSMAUG00000019998	Rpusd1	100	81.298	Mesocricetus_auratus
ENSSTOG00000004276	RPUSD1	100	87.821	ENSMICG00000017561	RPUSD1	100	88.141	Microcebus_murinus
ENSSTOG00000004276	RPUSD1	100	88.235	ENSMOCG00000014082	Rpusd1	100	88.235	Microtus_ochrogaster
ENSSTOG00000004276	RPUSD1	80	65.714	ENSMMOG00000012569	rpusd1	99	57.667	Mola_mola
ENSSTOG00000004276	RPUSD1	100	69.677	ENSMODG00000016882	RPUSD1	100	70.000	Monodelphis_domestica
ENSSTOG00000004276	RPUSD1	98	57.516	ENSMALG00000017818	rpusd1	98	58.170	Monopterus_albus
ENSSTOG00000004276	RPUSD1	100	89.216	MGP_CAROLIEiJ_G0021244	Rpusd1	100	89.216	Mus_caroli
ENSSTOG00000004276	RPUSD1	100	89.542	ENSMUSG00000041199	Rpusd1	100	89.542	Mus_musculus
ENSSTOG00000004276	RPUSD1	100	87.662	MGP_PahariEiJ_G0023562	Rpusd1	100	87.662	Mus_pahari
ENSSTOG00000004276	RPUSD1	100	89.542	MGP_SPRETEiJ_G0022155	Rpusd1	100	89.542	Mus_spretus
ENSSTOG00000004276	RPUSD1	100	82.026	ENSMPUG00000015897	RPUSD1	100	83.660	Mustela_putorius_furo
ENSSTOG00000004276	RPUSD1	100	86.859	ENSMLUG00000001089	RPUSD1	100	87.500	Myotis_lucifugus
ENSSTOG00000004276	RPUSD1	100	89.869	ENSNGAG00000003595	Rpusd1	100	89.869	Nannospalax_galili
ENSSTOG00000004276	RPUSD1	98	51.266	ENSNBRG00000006457	rpusd1	98	57.475	Neolamprologus_brichardi
ENSSTOG00000004276	RPUSD1	55	82.857	ENSNLEG00000008424	-	100	83.429	Nomascus_leucogenys
ENSSTOG00000004276	RPUSD1	100	70.740	ENSMEUG00000016049	RPUSD1	100	70.740	Notamacropus_eugenii
ENSSTOG00000004276	RPUSD1	99	80.263	ENSOPRG00000008340	RPUSD1	99	80.263	Ochotona_princeps
ENSSTOG00000004276	RPUSD1	100	87.255	ENSODEG00000016945	RPUSD1	100	87.255	Octodon_degus
ENSSTOG00000004276	RPUSD1	98	55.732	ENSONIG00000015672	rpusd1	99	57.329	Oreochromis_niloticus
ENSSTOG00000004276	RPUSD1	99	58.609	ENSORLG00000013009	rpusd1	99	58.609	Oryzias_latipes
ENSSTOG00000004276	RPUSD1	99	58.278	ENSORLG00020010382	rpusd1	99	58.278	Oryzias_latipes_hni
ENSSTOG00000004276	RPUSD1	99	57.616	ENSORLG00015021354	rpusd1	99	57.616	Oryzias_latipes_hsok
ENSSTOG00000004276	RPUSD1	98	58.528	ENSOMEG00000021426	rpusd1	98	58.528	Oryzias_melastigma
ENSSTOG00000004276	RPUSD1	100	91.026	ENSOGAG00000003795	RPUSD1	100	91.026	Otolemur_garnettii
ENSSTOG00000004276	RPUSD1	100	87.338	ENSOARG00000014254	RPUSD1	100	88.636	Ovis_aries
ENSSTOG00000004276	RPUSD1	100	84.936	ENSPPAG00000034797	RPUSD1	100	85.577	Pan_paniscus
ENSSTOG00000004276	RPUSD1	100	83.333	ENSPPRG00000012389	RPUSD1	100	83.333	Panthera_pardus
ENSSTOG00000004276	RPUSD1	100	83.007	ENSPTIG00000008545	RPUSD1	92	83.007	Panthera_tigris_altaica
ENSSTOG00000004276	RPUSD1	100	84.936	ENSPTRG00000007565	RPUSD1	100	85.577	Pan_troglodytes
ENSSTOG00000004276	RPUSD1	100	86.859	ENSPANG00000024401	RPUSD1	100	87.500	Papio_anubis
ENSSTOG00000004276	RPUSD1	99	58.974	ENSPKIG00000018890	rpusd1	91	58.974	Paramormyrops_kingsleyae
ENSSTOG00000004276	RPUSD1	99	66.340	ENSPSIG00000013945	RPUSD1	100	66.340	Pelodiscus_sinensis
ENSSTOG00000004276	RPUSD1	98	57.860	ENSPMGG00000014950	rpusd1	98	57.860	Periophthalmus_magnuspinnatus
ENSSTOG00000004276	RPUSD1	100	88.235	ENSPEMG00000000497	Rpusd1	100	88.235	Peromyscus_maniculatus_bairdii
ENSSTOG00000004276	RPUSD1	84	58.077	ENSPMAG00000001563	rpusd1	99	52.303	Petromyzon_marinus
ENSSTOG00000004276	RPUSD1	100	70.588	ENSPCIG00000021216	-	94	70.588	Phascolarctos_cinereus
ENSSTOG00000004276	RPUSD1	98	57.525	ENSPFOG00000007946	rpusd1	98	57.525	Poecilia_formosa
ENSSTOG00000004276	RPUSD1	98	57.525	ENSPLAG00000011925	rpusd1	98	57.525	Poecilia_latipinna
ENSSTOG00000004276	RPUSD1	98	57.191	ENSPMEG00000002910	rpusd1	98	57.191	Poecilia_mexicana
ENSSTOG00000004276	RPUSD1	98	58.000	ENSPREG00000019851	rpusd1	98	58.000	Poecilia_reticulata
ENSSTOG00000004276	RPUSD1	100	68.627	ENSPCAG00000002258	RPUSD1	100	68.627	Procavia_capensis
ENSSTOG00000004276	RPUSD1	100	88.782	ENSPCOG00000022582	RPUSD1	100	89.103	Propithecus_coquereli
ENSSTOG00000004276	RPUSD1	100	83.974	ENSPVAG00000013104	RPUSD1	100	84.615	Pteropus_vampyrus
ENSSTOG00000004276	RPUSD1	98	57.860	ENSPNYG00000024076	rpusd1	98	58.194	Pundamilia_nyererei
ENSSTOG00000004276	RPUSD1	99	57.756	ENSPNAG00000013806	rpusd1	100	57.756	Pygocentrus_nattereri
ENSSTOG00000004276	RPUSD1	100	88.562	ENSRNOG00000023639	Rpusd1	100	88.562	Rattus_norvegicus
ENSSTOG00000004276	RPUSD1	100	86.538	ENSRBIG00000030238	RPUSD1	100	87.179	Rhinopithecus_bieti
ENSSTOG00000004276	RPUSD1	100	86.538	ENSRROG00000036663	RPUSD1	100	87.179	Rhinopithecus_roxellana
ENSSTOG00000004276	RPUSD1	100	86.275	ENSSBOG00000033063	RPUSD1	100	87.582	Saimiri_boliviensis_boliviensis
ENSSTOG00000004276	RPUSD1	100	70.261	ENSSHAG00000013500	RPUSD1	100	70.261	Sarcophilus_harrisii
ENSSTOG00000004276	RPUSD1	99	62.583	ENSSFOG00015014394	rpusd1	99	62.583	Scleropages_formosus
ENSSTOG00000004276	RPUSD1	98	57.377	ENSSMAG00000008045	rpusd1	91	57.377	Scophthalmus_maximus
ENSSTOG00000004276	RPUSD1	83	66.403	ENSSDUG00000001829	rpusd1	95	59.477	Seriola_dumerili
ENSSTOG00000004276	RPUSD1	83	66.403	ENSSLDG00000020853	rpusd1	95	59.477	Seriola_lalandi_dorsalis
ENSSTOG00000004276	RPUSD1	55	87.425	ENSSARG00000011187	-	100	87.425	Sorex_araneus
ENSSTOG00000004276	RPUSD1	63	53.368	ENSSPUG00000005119	-	100	53.368	Sphenodon_punctatus
ENSSTOG00000004276	RPUSD1	98	58.033	ENSSPAG00000012708	rpusd1	98	58.361	Stegastes_partitus
ENSSTOG00000004276	RPUSD1	100	84.936	ENSSSCG00000008000	RPUSD1	98	89.370	Sus_scrofa
ENSSTOG00000004276	RPUSD1	83	74.118	ENSTGUG00000015375	RPUSD1	100	74.118	Taeniopygia_guttata
ENSSTOG00000004276	RPUSD1	98	57.516	ENSTRUG00000003041	rpusd1	98	57.516	Takifugu_rubripes
ENSSTOG00000004276	RPUSD1	98	55.333	ENSTNIG00000002660	rpusd1	99	55.333	Tetraodon_nigroviridis
ENSSTOG00000004276	RPUSD1	100	87.179	ENSTTRG00000010167	RPUSD1	100	87.179	Tursiops_truncatus
ENSSTOG00000004276	RPUSD1	100	83.007	ENSUAMG00000012736	RPUSD1	100	83.660	Ursus_americanus
ENSSTOG00000004276	RPUSD1	100	83.007	ENSUMAG00000021174	RPUSD1	100	83.660	Ursus_maritimus
ENSSTOG00000004276	RPUSD1	100	83.007	ENSVVUG00000012357	RPUSD1	100	83.007	Vulpes_vulpes
ENSSTOG00000004276	RPUSD1	100	62.092	ENSXETG00000007184	rpusd1	100	62.092	Xenopus_tropicalis
ENSSTOG00000004276	RPUSD1	98	56.667	ENSXCOG00000017930	rpusd1	98	56.667	Xiphophorus_couchianus
ENSSTOG00000004276	RPUSD1	98	57.333	ENSXMAG00000024084	rpusd1	98	57.333	Xiphophorus_maculatus