EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000004450 (Gene tree)
Gene ID: 101960474
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 34754 bases
Position: chrJH393310.1:10307835-10342588
Accession: 101960474
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000004014	RRM_1	PF00076.22	2.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000004474	SCAF4-201	3195	XM_005323601	ENSSTOP00000004014	1064 (aa)	XP_005323658	I3M4B4

Gene Model

Click here to download ENSSTOG00000004450's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004450's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000004450	SCAF4	100	88.167	ENSG00000156304	SCAF4	99	87.811	Homo_sapiens
ENSSTOG00000004450	SCAF4	77	94.424	ENSAMEG00000014987	SCAF4	96	94.667	Ailuropoda_melanoleuca
ENSSTOG00000004450	SCAF4	100	70.325	ENSAPLG00000002509	SCAF4	58	73.261	Anas_platyrhynchos
ENSSTOG00000004450	SCAF4	100	87.822	ENSANAG00000037494	SCAF4	99	87.378	Aotus_nancymaae
ENSSTOG00000004450	SCAF4	93	45.009	ENSAMXG00000008585	scaf4a	59	54.281	Astyanax_mexicanus
ENSSTOG00000004450	SCAF4	100	85.903	ENSBTAG00000018855	SCAF4	99	85.815	Bos_taurus
ENSSTOG00000004450	SCAF4	100	87.223	ENSCJAG00000008993	SCAF4	99	86.602	Callithrix_jacchus
ENSSTOG00000004450	SCAF4	100	87.279	ENSCAFG00000008863	SCAF4	99	87.014	Canis_familiaris
ENSSTOG00000004450	SCAF4	100	85.159	ENSCAFG00020026019	SCAF4	92	97.692	Canis_lupus_dingo
ENSSTOG00000004450	SCAF4	100	86.055	ENSCHIG00000008385	SCAF4	99	85.878	Capra_hircus
ENSSTOG00000004450	SCAF4	92	91.411	ENSTSYG00000011344	SCAF4	98	91.411	Carlito_syrichta
ENSSTOG00000004450	SCAF4	100	86.530	ENSCPOG00000012443	SCAF4	99	85.549	Cavia_porcellus
ENSSTOG00000004450	SCAF4	100	87.355	ENSCCAG00000033727	SCAF4	94	94.962	Cebus_capucinus
ENSSTOG00000004450	SCAF4	100	86.732	ENSCATG00000030379	SCAF4	100	86.014	Cercocebus_atys
ENSSTOG00000004450	SCAF4	100	84.796	ENSCLAG00000006298	SCAF4	100	84.970	Chinchilla_lanigera
ENSSTOG00000004450	SCAF4	100	86.515	ENSCSAG00000009438	SCAF4	99	86.077	Chlorocebus_sabaeus
ENSSTOG00000004450	SCAF4	100	88.157	ENSCANG00000029847	SCAF4	99	87.711	Colobus_angolensis_palliatus
ENSSTOG00000004450	SCAF4	100	80.151	ENSCGRG00001020821	Scaf4	99	79.058	Cricetulus_griseus_chok1gshd
ENSSTOG00000004450	SCAF4	100	79.916	ENSCGRG00000014360	Scaf4	99	87.093	Cricetulus_griseus_crigri
ENSSTOG00000004450	SCAF4	100	84.336	ENSDNOG00000019014	SCAF4	93	83.894	Dasypus_novemcinctus
ENSSTOG00000004450	SCAF4	89	96.000	ENSETEG00000000583	SCAF4	87	96.000	Echinops_telfairi
ENSSTOG00000004450	SCAF4	100	86.949	ENSEASG00005007756	SCAF4	99	86.861	Equus_asinus_asinus
ENSSTOG00000004450	SCAF4	100	86.784	ENSECAG00000014248	SCAF4	99	86.872	Equus_caballus
ENSSTOG00000004450	SCAF4	100	88.541	ENSFCAG00000002228	SCAF4	99	88.809	Felis_catus
ENSSTOG00000004450	SCAF4	100	85.702	ENSFDAG00000017780	SCAF4	100	85.527	Fukomys_damarensis
ENSSTOG00000004450	SCAF4	100	70.939	ENSGALG00000033965	SCAF4	58	72.643	Gallus_gallus
ENSSTOG00000004450	SCAF4	90	88.013	ENSGGOG00000015557	SCAF4	99	84.551	Gorilla_gorilla
ENSSTOG00000004450	SCAF4	100	86.513	ENSHGLG00000010582	SCAF4	99	86.868	Heterocephalus_glaber_female
ENSSTOG00000004450	SCAF4	100	85.526	ENSHGLG00100009441	SCAF4	100	85.877	Heterocephalus_glaber_male
ENSSTOG00000004450	SCAF4	67	50.000	ENSIPUG00000011285	scaf4	53	79.487	Ictalurus_punctatus
ENSSTOG00000004450	SCAF4	100	84.452	ENSJJAG00000019447	Scaf4	99	84.364	Jaculus_jaculus
ENSSTOG00000004450	SCAF4	99	57.143	ENSLACG00000013913	SCAF4	58	61.250	Latimeria_chalumnae
ENSSTOG00000004450	SCAF4	95	53.078	ENSLOCG00000009162	scaf4a	58	59.361	Lepisosteus_oculatus
ENSSTOG00000004450	SCAF4	100	95.616	ENSLAFG00000010710	SCAF4	94	95.479	Loxodonta_africana
ENSSTOG00000004450	SCAF4	100	86.312	ENSMFAG00000037668	SCAF4	99	85.440	Macaca_fascicularis
ENSSTOG00000004450	SCAF4	100	87.367	ENSMMUG00000001712	SCAF4	99	86.484	Macaca_mulatta
ENSSTOG00000004450	SCAF4	100	86.941	ENSMNEG00000032966	SCAF4	99	86.852	Macaca_nemestrina
ENSSTOG00000004450	SCAF4	100	87.434	ENSMLEG00000039674	SCAF4	99	87.168	Mandrillus_leucophaeus
ENSSTOG00000004450	SCAF4	100	70.764	ENSMGAG00000014515	SCAF4	58	72.798	Meleagris_gallopavo
ENSSTOG00000004450	SCAF4	100	83.481	ENSMAUG00000013307	Scaf4	100	82.597	Mesocricetus_auratus
ENSSTOG00000004450	SCAF4	100	88.482	ENSMICG00000005256	SCAF4	99	88.214	Microcebus_murinus
ENSSTOG00000004450	SCAF4	100	82.643	ENSMOCG00000012087	Scaf4	94	92.839	Microtus_ochrogaster
ENSSTOG00000004450	SCAF4	100	78.326	ENSMODG00000021040	SCAF4	99	77.885	Monodelphis_domestica
ENSSTOG00000004450	SCAF4	100	91.014	MGP_CAROLIEiJ_G0020944	Scaf4	99	86.516	Mus_caroli
ENSSTOG00000004450	SCAF4	100	85.697	ENSMUSG00000022983	Scaf4	97	87.167	Mus_musculus
ENSSTOG00000004450	SCAF4	98	89.412	MGP_PahariEiJ_G0016649	Scaf4	99	84.788	Mus_pahari
ENSSTOG00000004450	SCAF4	100	79.181	MGP_SPRETEiJ_G0021850	Scaf4	99	87.290	Mus_spretus
ENSSTOG00000004450	SCAF4	100	84.817	ENSMPUG00000001078	SCAF4	99	84.817	Mustela_putorius_furo
ENSSTOG00000004450	SCAF4	99	73.282	ENSMLUG00000011472	SCAF4	77	76.711	Myotis_lucifugus
ENSSTOG00000004450	SCAF4	100	86.055	ENSNGAG00000005214	Scaf4	99	84.894	Nannospalax_galili
ENSSTOG00000004450	SCAF4	100	88.612	ENSNLEG00000003569	SCAF4	99	87.811	Nomascus_leucogenys
ENSSTOG00000004450	SCAF4	78	90.217	ENSOPRG00000007016	SCAF4	77	89.674	Ochotona_princeps
ENSSTOG00000004450	SCAF4	100	86.140	ENSODEG00000002718	SCAF4	99	85.965	Octodon_degus
ENSSTOG00000004450	SCAF4	69	51.577	ENSONIG00000004687	scaf4a	50	74.390	Oreochromis_niloticus
ENSSTOG00000004450	SCAF4	100	82.240	ENSOCUG00000008336	SCAF4	99	81.802	Oryctolagus_cuniculus
ENSSTOG00000004450	SCAF4	100	94.943	ENSOGAG00000014653	SCAF4	93	94.690	Otolemur_garnettii
ENSSTOG00000004450	SCAF4	100	85.563	ENSOARG00000013894	SCAF4	98	85.475	Ovis_aries
ENSSTOG00000004450	SCAF4	100	88.167	ENSPPAG00000028535	SCAF4	99	87.811	Pan_paniscus
ENSSTOG00000004450	SCAF4	100	88.541	ENSPPRG00000000635	SCAF4	99	89.078	Panthera_pardus
ENSSTOG00000004450	SCAF4	100	85.172	ENSPTIG00000021578	SCAF4	99	82.923	Panthera_tigris_altaica
ENSSTOG00000004450	SCAF4	100	88.167	ENSPTRG00000013848	SCAF4	99	87.811	Pan_troglodytes
ENSSTOG00000004450	SCAF4	100	87.232	ENSPANG00000017332	SCAF4	99	86.964	Papio_anubis
ENSSTOG00000004450	SCAF4	62	56.150	ENSPKIG00000022408	scaf4a	77	79.747	Paramormyrops_kingsleyae
ENSSTOG00000004450	SCAF4	100	72.511	ENSPSIG00000014242	SCAF4	57	73.798	Pelodiscus_sinensis
ENSSTOG00000004450	SCAF4	59	76.614	ENSPCIG00000028183	SCAF4	91	76.127	Phascolarctos_cinereus
ENSSTOG00000004450	SCAF4	53	60.000	ENSPFOG00000017156	scaf4a	53	72.561	Poecilia_formosa
ENSSTOG00000004450	SCAF4	100	87.018	ENSPPYG00000011355	SCAF4	100	86.667	Pongo_abelii
ENSSTOG00000004450	SCAF4	92	83.588	ENSPCAG00000009998	SCAF4	92	82.316	Procavia_capensis
ENSSTOG00000004450	SCAF4	100	87.933	ENSPCOG00000018710	SCAF4	99	87.134	Propithecus_coquereli
ENSSTOG00000004450	SCAF4	100	85.954	ENSPVAG00000005220	SCAF4	99	85.601	Pteropus_vampyrus
ENSSTOG00000004450	SCAF4	98	84.766	ENSRNOG00000002104	Scaf4	84	86.937	Rattus_norvegicus
ENSSTOG00000004450	SCAF4	100	84.838	ENSRBIG00000040007	SCAF4	94	94.521	Rhinopithecus_bieti
ENSSTOG00000004450	SCAF4	100	87.423	ENSRROG00000029488	SCAF4	99	87.625	Rhinopithecus_roxellana
ENSSTOG00000004450	SCAF4	100	78.553	ENSSHAG00000001581	SCAF4	99	77.846	Sarcophilus_harrisii
ENSSTOG00000004450	SCAF4	92	45.962	ENSSFOG00015006338	scaf4a	53	57.786	Scleropages_formosus
ENSSTOG00000004450	SCAF4	63	46.091	ENSSMAG00000003738	scaf4b	52	72.785	Scophthalmus_maximus
ENSSTOG00000004450	SCAF4	61	51.084	ENSSDUG00000012380	scaf4b	52	71.519	Seriola_dumerili
ENSSTOG00000004450	SCAF4	100	83.072	ENSSARG00000009994	SCAF4	99	82.548	Sorex_araneus
ENSSTOG00000004450	SCAF4	100	83.217	ENSSSCG00000021023	SCAF4	99	82.780	Sus_scrofa
ENSSTOG00000004450	SCAF4	74	65.222	ENSTGUG00000013464	SCAF4	57	86.711	Taeniopygia_guttata
ENSSTOG00000004450	SCAF4	100	86.030	ENSTTRG00000010963	SCAF4	99	85.765	Tursiops_truncatus
ENSSTOG00000004450	SCAF4	100	84.982	ENSUAMG00000008860	SCAF4	99	85.247	Ursus_americanus
ENSSTOG00000004450	SCAF4	100	84.717	ENSUMAG00000016962	SCAF4	100	85.159	Ursus_maritimus
ENSSTOG00000004450	SCAF4	100	87.279	ENSVVUG00000002953	SCAF4	100	87.014	Vulpes_vulpes
ENSSTOG00000004450	SCAF4	99	50.765	ENSXETG00000007351	scaf4	61	54.825	Xenopus_tropicalis