EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSTOG00000004476 (Gene tree)
Gene ID
101968827
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Ictidomys_tridecemlineatus
Status
putative
Strand
Plus strand
Length
36024 bases
Position
chrJH393342.1:5814329-5850352
Accession
101968827
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSTOP00000004023CPSF73-100_CPF11718.86.4e-5511
ENSSTOP00000004023Beta-CaspPF10996.84.5e-3411
ENSSTOP00000004023Lactamase_BPF00753.271e-1811
ENSSTOP00000004023RMMBLPF07521.121.2e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSTOT00000004483CPSF3-2012594XM_005327351ENSSTOP00000004023684 (aa)XP_005327408I3M4C1
Gene Model
Click here to download ENSSTOG00000004476's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004476's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSTOG00000004476CPSF36440.089ENSSTOG00000020019INTS117340.089
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSTOG00000004476CPSF310098.830ENSG00000119203CPSF3100100.000Homo_sapiens
ENSSTOG00000004476CPSF37396.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSSTOG00000004476CPSF39985.125ENSAPOG00000022087cpsf39885.125Acanthochromis_polyacanthus
ENSSTOG00000004476CPSF310099.415ENSAMEG00000008493CPSF310099.415Ailuropoda_melanoleuca
ENSSTOG00000004476CPSF39282.484ENSACIG00000009846cpsf39982.484Amphilophus_citrinellus
ENSSTOG00000004476CPSF39286.667ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSSTOG00000004476CPSF39988.088ENSAOCG00000010077CPSF39888.088Amphiprion_ocellaris
ENSSTOG00000004476CPSF39985.125ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSSTOG00000004476CPSF39985.272ENSAPEG00000019526cpsf39786.420Amphiprion_percula
ENSSTOG00000004476CPSF39988.088ENSAPEG00000021167CPSF39888.088Amphiprion_percula
ENSSTOG00000004476CPSF39985.272ENSATEG00000003959cpsf39885.272Anabas_testudineus
ENSSTOG00000004476CPSF39983.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSSTOG00000004476CPSF39895.685ENSAPLG00000006941CPSF39895.685Anas_platyrhynchos
ENSSTOG00000004476CPSF39392.598ENSACAG00000001759CPSF39992.598Anolis_carolinensis
ENSSTOG00000004476CPSF310092.251ENSANAG00000031254CPSF310092.251Aotus_nancymaae
ENSSTOG00000004476CPSF39286.508ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSSTOG00000004476CPSF39785.414ENSACLG00000014484cpsf39985.414Astatotilapia_calliptera
ENSSTOG00000004476CPSF39988.235ENSAMXG00000004786cpsf39888.235Astyanax_mexicanus
ENSSTOG00000004476CPSF310099.269ENSBTAG00000019735CPSF310099.269Bos_taurus
ENSSTOG00000004476CPSF38661.564WBGene00013460cpsf-38561.564Caenorhabditis_elegans
ENSSTOG00000004476CPSF310098.830ENSCJAG00000006276CPSF310098.830Callithrix_jacchus
ENSSTOG00000004476CPSF310099.415ENSCAFG00000003375CPSF39599.415Canis_familiaris
ENSSTOG00000004476CPSF39099.677ENSCAFG00020026799CPSF310099.677Canis_lupus_dingo
ENSSTOG00000004476CPSF310099.269ENSCHIG00000013973CPSF310099.269Capra_hircus
ENSSTOG00000004476CPSF310098.830ENSTSYG00000002967CPSF310098.830Carlito_syrichta
ENSSTOG00000004476CPSF39897.301ENSCAPG00000013851CPSF310097.301Cavia_aperea
ENSSTOG00000004476CPSF310097.368ENSCPOG00000011299CPSF310097.368Cavia_porcellus
ENSSTOG00000004476CPSF310098.684ENSCCAG00000036730CPSF310098.684Cebus_capucinus
ENSSTOG00000004476CPSF310096.204ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSSTOG00000004476CPSF310097.222ENSCLAG00000002727CPSF310097.222Chinchilla_lanigera
ENSSTOG00000004476CPSF310091.082ENSCSAG00000007125CPSF310091.082Chlorocebus_sabaeus
ENSSTOG00000004476CPSF386100.000ENSCHOG00000000180CPSF38571.930Choloepus_hoffmanni
ENSSTOG00000004476CPSF39995.894ENSCPBG00000014074CPSF39995.894Chrysemys_picta_bellii
ENSSTOG00000004476CPSF39968.175ENSCING00000007214-9868.175Ciona_intestinalis
ENSSTOG00000004476CPSF310085.610ENSCANG00000034435CPSF310085.610Colobus_angolensis_palliatus
ENSSTOG00000004476CPSF310098.538ENSCGRG00001013134Cpsf310098.538Cricetulus_griseus_chok1gshd
ENSSTOG00000004476CPSF310098.538ENSCGRG00000018319Cpsf310098.538Cricetulus_griseus_crigri
ENSSTOG00000004476CPSF39986.490ENSCSEG00000002021CPSF39986.244Cynoglossus_semilaevis
ENSSTOG00000004476CPSF39988.382ENSCVAG00000015067CPSF39888.382Cyprinodon_variegatus
ENSSTOG00000004476CPSF39988.971ENSDARG00000027649cpsf39888.971Danio_rerio
ENSSTOG00000004476CPSF310097.372ENSDNOG00000008940CPSF39597.372Dasypus_novemcinctus
ENSSTOG00000004476CPSF39598.771ENSDORG00000014263Cpsf310098.771Dipodomys_ordii
ENSSTOG00000004476CPSF39967.452FBgn0261065Cpsf739867.452Drosophila_melanogaster
ENSSTOG00000004476CPSF39585.714ENSETEG00000003893CPSF310085.714Echinops_telfairi
ENSSTOG00000004476CPSF39978.797ENSEBUG00000009018cpsf39878.940Eptatretus_burgeri
ENSSTOG00000004476CPSF310099.415ENSEASG00005003970CPSF310099.415Equus_asinus_asinus
ENSSTOG00000004476CPSF310099.415ENSECAG00000019911CPSF310099.415Equus_caballus
ENSSTOG00000004476CPSF310083.772ENSEEUG00000015422CPSF310083.772Erinaceus_europaeus
ENSSTOG00000004476CPSF39987.794ENSELUG00000013775cpsf39887.794Esox_lucius
ENSSTOG00000004476CPSF310099.269ENSFCAG00000007852CPSF310099.269Felis_catus
ENSSTOG00000004476CPSF39595.363ENSFALG00000006572CPSF310095.363Ficedula_albicollis
ENSSTOG00000004476CPSF39997.067ENSFDAG00000006317CPSF39997.067Fukomys_damarensis
ENSSTOG00000004476CPSF35968.537ENSFHEG00000012186CPSF39968.537Fundulus_heteroclitus
ENSSTOG00000004476CPSF39984.683ENSFHEG00000014774cpsf39884.683Fundulus_heteroclitus
ENSSTOG00000004476CPSF39986.471ENSGMOG00000003157cpsf39886.471Gadus_morhua
ENSSTOG00000004476CPSF39994.567ENSGALG00000016424CPSF39994.567Gallus_gallus
ENSSTOG00000004476CPSF39282.512ENSGAFG00000019449cpsf39982.512Gambusia_affinis
ENSSTOG00000004476CPSF39988.071ENSGAFG00000008016CPSF39888.071Gambusia_affinis
ENSSTOG00000004476CPSF36894.004ENSGAGG00000025583CPSF39394.004Gopherus_agassizii
ENSSTOG00000004476CPSF310096.567ENSGGOG00000001757CPSF310098.898Gorilla_gorilla
ENSSTOG00000004476CPSF39985.316ENSHBUG00000001188cpsf39985.316Haplochromis_burtoni
ENSSTOG00000004476CPSF35981.728ENSHBUG00000014332CPSF39981.728Haplochromis_burtoni
ENSSTOG00000004476CPSF310096.637ENSHGLG00000000666CPSF39996.637Heterocephalus_glaber_female
ENSSTOG00000004476CPSF310096.637ENSHGLG00100007765CPSF39996.637Heterocephalus_glaber_male
ENSSTOG00000004476CPSF39984.604ENSHCOG00000007251cpsf39984.604Hippocampus_comes
ENSSTOG00000004476CPSF39986.324ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSSTOG00000004476CPSF39987.059ENSIPUG00000023488cpsf39887.059Ictalurus_punctatus
ENSSTOG00000004476CPSF310097.515ENSJJAG00000023415Cpsf310097.515Jaculus_jaculus
ENSSTOG00000004476CPSF39987.647ENSKMAG00000007317CPSF39887.647Kryptolebias_marmoratus
ENSSTOG00000004476CPSF39984.118ENSKMAG00000002806cpsf39884.118Kryptolebias_marmoratus
ENSSTOG00000004476CPSF39589.198ENSLBEG00000013492CPSF39889.198Labrus_bergylta
ENSSTOG00000004476CPSF39979.295ENSLBEG00000020569cpsf39479.295Labrus_bergylta
ENSSTOG00000004476CPSF35579.357ENSLBEG00000015018-9979.357Labrus_bergylta
ENSSTOG00000004476CPSF39983.652ENSLACG00000008308CPSF39883.652Latimeria_chalumnae
ENSSTOG00000004476CPSF39989.134ENSLOCG00000016823cpsf39889.134Lepisosteus_oculatus
ENSSTOG00000004476CPSF39997.794ENSLAFG00000009467CPSF310097.794Loxodonta_africana
ENSSTOG00000004476CPSF310098.830ENSMFAG00000001339CPSF310098.830Macaca_fascicularis
ENSSTOG00000004476CPSF39598.764ENSMMUG00000018038CPSF310098.764Macaca_mulatta
ENSSTOG00000004476CPSF310086.111ENSMNEG00000039447CPSF310086.111Macaca_nemestrina
ENSSTOG00000004476CPSF310098.977ENSMLEG00000026825CPSF310098.977Mandrillus_leucophaeus
ENSSTOG00000004476CPSF39985.567ENSMAMG00000003076cpsf39885.567Mastacembelus_armatus
ENSSTOG00000004476CPSF39285.285ENSMAMG00000008835CPSF39985.285Mastacembelus_armatus
ENSSTOG00000004476CPSF39985.316ENSMZEG00005014358cpsf39985.316Maylandia_zebra
ENSSTOG00000004476CPSF39988.676ENSMZEG00005006258CPSF39888.676Maylandia_zebra
ENSSTOG00000004476CPSF39894.603ENSMGAG00000013995CPSF310094.603Meleagris_gallopavo
ENSSTOG00000004476CPSF35596.543ENSMAUG00000000166Cpsf310096.543Mesocricetus_auratus
ENSSTOG00000004476CPSF310093.567ENSMICG00000002363CPSF310093.567Microcebus_murinus
ENSSTOG00000004476CPSF310094.298ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSSTOG00000004476CPSF39482.481ENSMMOG00000018212CPSF39882.481Mola_mola
ENSSTOG00000004476CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSSTOG00000004476CPSF310096.671ENSMODG00000014703CPSF310096.671Monodelphis_domestica
ENSSTOG00000004476CPSF39383.594ENSMALG00000011474CPSF39983.594Monopterus_albus
ENSSTOG00000004476CPSF39985.756ENSMALG00000016416cpsf39985.756Monopterus_albus
ENSSTOG00000004476CPSF310098.246MGP_CAROLIEiJ_G0017640Cpsf310098.246Mus_caroli
ENSSTOG00000004476CPSF310098.246ENSMUSG00000054309Cpsf310098.246Mus_musculus
ENSSTOG00000004476CPSF310098.099MGP_PahariEiJ_G0029397Cpsf310098.099Mus_pahari
ENSSTOG00000004476CPSF310098.246MGP_SPRETEiJ_G0018481Cpsf310098.246Mus_spretus
ENSSTOG00000004476CPSF310098.684ENSMPUG00000013213CPSF310098.684Mustela_putorius_furo
ENSSTOG00000004476CPSF310098.394ENSMLUG00000010636CPSF310098.394Myotis_lucifugus
ENSSTOG00000004476CPSF310098.392ENSNGAG00000019836Cpsf310098.392Nannospalax_galili
ENSSTOG00000004476CPSF39984.875ENSNBRG00000004770cpsf39984.875Neolamprologus_brichardi
ENSSTOG00000004476CPSF39286.508ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSSTOG00000004476CPSF310098.830ENSNLEG00000013359CPSF310098.830Nomascus_leucogenys
ENSSTOG00000004476CPSF310065.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSSTOG00000004476CPSF310089.912ENSOPRG00000008902CPSF310089.912Ochotona_princeps
ENSSTOG00000004476CPSF310096.784ENSODEG00000003129CPSF310096.784Octodon_degus
ENSSTOG00000004476CPSF39985.463ENSONIG00000018812cpsf39985.463Oreochromis_niloticus
ENSSTOG00000004476CPSF38296.454ENSOANG00000008577CPSF310096.454Ornithorhynchus_anatinus
ENSSTOG00000004476CPSF310098.830ENSOCUG00000003728CPSF310098.830Oryctolagus_cuniculus
ENSSTOG00000004476CPSF39983.407ENSORLG00000018854cpsf39983.407Oryzias_latipes
ENSSTOG00000004476CPSF39983.260ENSORLG00020013331cpsf39983.260Oryzias_latipes_hni
ENSSTOG00000004476CPSF39983.407ENSORLG00015011017cpsf39983.407Oryzias_latipes_hsok
ENSSTOG00000004476CPSF39983.554ENSOMEG00000010647cpsf39483.554Oryzias_melastigma
ENSSTOG00000004476CPSF310089.181ENSOGAG00000001680CPSF310089.181Otolemur_garnettii
ENSSTOG00000004476CPSF310099.269ENSOARG00000015073CPSF310099.269Ovis_aries
ENSSTOG00000004476CPSF310098.977ENSPPAG00000042457CPSF310098.977Pan_paniscus
ENSSTOG00000004476CPSF310098.977ENSPPRG00000016790CPSF310098.977Panthera_pardus
ENSSTOG00000004476CPSF39998.971ENSPTIG00000003920CPSF310098.898Panthera_tigris_altaica
ENSSTOG00000004476CPSF310098.977ENSPTRG00000011638CPSF310098.977Pan_troglodytes
ENSSTOG00000004476CPSF310098.684ENSPANG00000016798CPSF310098.684Papio_anubis
ENSSTOG00000004476CPSF39989.265ENSPKIG00000023646cpsf39988.992Paramormyrops_kingsleyae
ENSSTOG00000004476CPSF39994.143ENSPSIG00000016144CPSF310094.143Pelodiscus_sinensis
ENSSTOG00000004476CPSF35979.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSSTOG00000004476CPSF38087.500ENSPMGG00000006141-9587.500Periophthalmus_magnuspinnatus
ENSSTOG00000004476CPSF310097.953ENSPEMG00000017668Cpsf310097.953Peromyscus_maniculatus_bairdii
ENSSTOG00000004476CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSSTOG00000004476CPSF39897.451ENSPCIG00000009823CPSF39897.546Phascolarctos_cinereus
ENSSTOG00000004476CPSF39987.776ENSPFOG00000010418-9887.776Poecilia_formosa
ENSSTOG00000004476CPSF39984.457ENSPFOG00000015922cpsf39984.457Poecilia_formosa
ENSSTOG00000004476CPSF39984.457ENSPLAG00000000882cpsf39984.457Poecilia_latipinna
ENSSTOG00000004476CPSF35980.693ENSPLAG00000021300-9980.693Poecilia_latipinna
ENSSTOG00000004476CPSF39984.604ENSPMEG00000018309cpsf39984.604Poecilia_mexicana
ENSSTOG00000004476CPSF39982.327ENSPREG00000004482CPSF39882.327Poecilia_reticulata
ENSSTOG00000004476CPSF39282.353ENSPREG00000014875cpsf39982.353Poecilia_reticulata
ENSSTOG00000004476CPSF310094.444ENSPPYG00000012666CPSF310094.444Pongo_abelii
ENSSTOG00000004476CPSF39564.055ENSPCAG00000015042CPSF310064.055Procavia_capensis
ENSSTOG00000004476CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSSTOG00000004476CPSF39998.974ENSPVAG00000005324CPSF39998.974Pteropus_vampyrus
ENSSTOG00000004476CPSF39985.316ENSPNYG00000004405cpsf39985.316Pundamilia_nyererei
ENSSTOG00000004476CPSF37991.529ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSSTOG00000004476CPSF39987.500ENSPNAG00000023060cpsf39887.500Pygocentrus_nattereri
ENSSTOG00000004476CPSF39998.240ENSRNOG00000052418Cpsf39998.240Rattus_norvegicus
ENSSTOG00000004476CPSF310092.982ENSRBIG00000041615CPSF39994.281Rhinopithecus_bieti
ENSSTOG00000004476CPSF310098.977ENSRROG00000033792CPSF310098.977Rhinopithecus_roxellana
ENSSTOG00000004476CPSF39340.726YLR277CYSH19540.726Saccharomyces_cerevisiae
ENSSTOG00000004476CPSF310092.609ENSSBOG00000027263CPSF310092.609Saimiri_boliviensis_boliviensis
ENSSTOG00000004476CPSF310097.661ENSSHAG00000007024CPSF310097.661Sarcophilus_harrisii
ENSSTOG00000004476CPSF39989.280ENSSFOG00015002108cpsf39989.280Scleropages_formosus
ENSSTOG00000004476CPSF39587.963ENSSMAG00000020534CPSF39587.963Scophthalmus_maximus
ENSSTOG00000004476CPSF39988.235ENSSDUG00000018498CPSF39888.235Seriola_dumerili
ENSSTOG00000004476CPSF39985.609ENSSDUG00000002828cpsf39685.609Seriola_dumerili
ENSSTOG00000004476CPSF39988.235ENSSLDG00000005234CPSF39888.235Seriola_lalandi_dorsalis
ENSSTOG00000004476CPSF39985.609ENSSLDG00000008469cpsf39190.847Seriola_lalandi_dorsalis
ENSSTOG00000004476CPSF310080.994ENSSARG00000005186CPSF310080.994Sorex_araneus
ENSSTOG00000004476CPSF39892.697ENSSPUG00000015525CPSF39792.697Sphenodon_punctatus
ENSSTOG00000004476CPSF39987.941ENSSPAG00000002906CPSF39887.941Stegastes_partitus
ENSSTOG00000004476CPSF39985.272ENSSPAG00000018579cpsf39885.272Stegastes_partitus
ENSSTOG00000004476CPSF39999.268ENSSSCG00000020799CPSF39999.268Sus_scrofa
ENSSTOG00000004476CPSF39995.448ENSTGUG00000013016CPSF39995.448Taeniopygia_guttata
ENSSTOG00000004476CPSF39985.147ENSTRUG00000007030cpsf39785.147Takifugu_rubripes
ENSSTOG00000004476CPSF35973.710ENSTRUG00000013905CPSF39973.710Takifugu_rubripes
ENSSTOG00000004476CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSSTOG00000004476CPSF38897.312ENSTTRG00000000861CPSF38897.312Tursiops_truncatus
ENSSTOG00000004476CPSF39996.334ENSUAMG00000007535CPSF39896.334Ursus_americanus
ENSSTOG00000004476CPSF39599.382ENSUMAG00000003676CPSF310099.382Ursus_maritimus
ENSSTOG00000004476CPSF39395.741ENSVPAG00000008041CPSF310095.741Vicugna_pacos
ENSSTOG00000004476CPSF310099.415ENSVVUG00000002194CPSF310099.415Vulpes_vulpes
ENSSTOG00000004476CPSF39989.868ENSXETG00000008263cpsf39889.868Xenopus_tropicalis
ENSSTOG00000004476CPSF39984.751ENSXCOG00000019695cpsf39984.751Xiphophorus_couchianus
ENSSTOG00000004476CPSF35479.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSSTOG00000004476CPSF39984.457ENSXMAG00000009784cpsf39984.457Xiphophorus_maculatus
ENSSTOG00000004476CPSF39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus

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