EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000004539 (Gene tree)
Gene ID: 101964380
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 69742 bases
Position: chrJH393310.1:9718925-9788666
Accession: 101964380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000004110	Npa1	PF11707.8	1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000004580	URB1-201	7547	XM_005323536	ENSSTOP00000004110	2267 (aa)	XP_005323593	I3M4I4

Gene Model

Click here to download ENSSTOG00000004539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000004539	URB1	99	83.672	ENSG00000142207	URB1	100	83.473	Homo_sapiens
ENSSTOG00000004539	URB1	99	42.702	ENSAPOG00000020308	urb1	99	43.166	Acanthochromis_polyacanthus
ENSSTOG00000004539	URB1	100	79.341	ENSAMEG00000011998	URB1	99	79.429	Ailuropoda_melanoleuca
ENSSTOG00000004539	URB1	95	44.778	ENSACIG00000003248	urb1	96	44.732	Amphilophus_citrinellus
ENSSTOG00000004539	URB1	99	40.957	ENSAOCG00000010364	urb1	99	41.373	Amphiprion_ocellaris
ENSSTOG00000004539	URB1	97	52.366	ENSAPEG00000010758	urb1	98	53.413	Amphiprion_percula
ENSSTOG00000004539	URB1	98	44.962	ENSATEG00000011790	urb1	96	44.913	Anabas_testudineus
ENSSTOG00000004539	URB1	97	56.337	ENSAPLG00000012791	URB1	100	56.428	Anas_platyrhynchos
ENSSTOG00000004539	URB1	98	53.257	ENSACAG00000002817	URB1	98	53.298	Anolis_carolinensis
ENSSTOG00000004539	URB1	100	82.645	ENSANAG00000024617	URB1	100	82.645	Aotus_nancymaae
ENSSTOG00000004539	URB1	99	44.567	ENSACLG00000024865	urb1	99	44.680	Astatotilapia_calliptera
ENSSTOG00000004539	URB1	99	39.851	ENSAMXG00000012306	urb1	99	39.982	Astyanax_mexicanus
ENSSTOG00000004539	URB1	99	76.468	ENSBTAG00000012412	URB1	99	76.424	Bos_taurus
ENSSTOG00000004539	URB1	100	81.966	ENSCJAG00000009118	URB1	100	81.966	Callithrix_jacchus
ENSSTOG00000004539	URB1	100	80.018	ENSCAFG00000008892	URB1	100	80.018	Canis_familiaris
ENSSTOG00000004539	URB1	100	78.945	ENSCAFG00020025994	-	100	78.945	Canis_lupus_dingo
ENSSTOG00000004539	URB1	100	79.868	ENSCAFG00020025987	-	100	79.868	Canis_lupus_dingo
ENSSTOG00000004539	URB1	99	75.811	ENSCHIG00000015645	URB1	99	75.898	Capra_hircus
ENSSTOG00000004539	URB1	100	81.838	ENSTSYG00000013286	URB1	99	81.838	Carlito_syrichta
ENSSTOG00000004539	URB1	98	79.109	ENSCAPG00000015589	URB1	99	79.109	Cavia_aperea
ENSSTOG00000004539	URB1	99	80.432	ENSCPOG00000006748	URB1	99	80.432	Cavia_porcellus
ENSSTOG00000004539	URB1	100	82.945	ENSCCAG00000021299	URB1	100	82.945	Cebus_capucinus
ENSSTOG00000004539	URB1	100	82.989	ENSCATG00000042630	URB1	100	82.989	Cercocebus_atys
ENSSTOG00000004539	URB1	99	81.630	ENSCLAG00000005262	URB1	99	81.630	Chinchilla_lanigera
ENSSTOG00000004539	URB1	100	81.225	ENSCSAG00000009584	URB1	100	81.225	Chlorocebus_sabaeus
ENSSTOG00000004539	URB1	99	58.214	ENSCPBG00000006454	URB1	99	58.536	Chrysemys_picta_bellii
ENSSTOG00000004539	URB1	100	82.769	ENSCANG00000031088	URB1	100	82.769	Colobus_angolensis_palliatus
ENSSTOG00000004539	URB1	98	77.669	ENSCGRG00001010616	Urb1	99	77.689	Cricetulus_griseus_chok1gshd
ENSSTOG00000004539	URB1	98	77.242	ENSCGRG00000015840	Urb1	99	77.242	Cricetulus_griseus_crigri
ENSSTOG00000004539	URB1	99	42.663	ENSCSEG00000012616	urb1	99	42.713	Cynoglossus_semilaevis
ENSSTOG00000004539	URB1	97	51.933	ENSCVAG00000009076	urb1	98	52.865	Cyprinodon_variegatus
ENSSTOG00000004539	URB1	99	42.813	ENSDARG00000060308	urb1	99	43.249	Danio_rerio
ENSSTOG00000004539	URB1	85	78.863	ENSDNOG00000015586	URB1	99	78.863	Dasypus_novemcinctus
ENSSTOG00000004539	URB1	100	81.310	ENSDORG00000006735	Urb1	100	81.310	Dipodomys_ordii
ENSSTOG00000004539	URB1	92	82.214	ENSETEG00000009080	URB1	92	82.214	Echinops_telfairi
ENSSTOG00000004539	URB1	99	80.141	ENSEASG00005007711	URB1	99	80.141	Equus_asinus_asinus
ENSSTOG00000004539	URB1	97	88.876	ENSECAG00000013206	URB1	99	88.876	Equus_caballus
ENSSTOG00000004539	URB1	57	87.552	ENSEEUG00000003626	-	56	87.552	Erinaceus_europaeus
ENSSTOG00000004539	URB1	99	44.400	ENSELUG00000020516	urb1	98	44.568	Esox_lucius
ENSSTOG00000004539	URB1	100	79.692	ENSFCAG00000002177	URB1	100	79.692	Felis_catus
ENSSTOG00000004539	URB1	98	51.214	ENSFALG00000004636	URB1	99	51.259	Ficedula_albicollis
ENSSTOG00000004539	URB1	99	81.074	ENSFDAG00000007288	URB1	95	81.074	Fukomys_damarensis
ENSSTOG00000004539	URB1	99	41.455	ENSFHEG00000000202	urb1	99	42.296	Fundulus_heteroclitus
ENSSTOG00000004539	URB1	93	47.150	ENSGMOG00000001838	urb1	94	47.309	Gadus_morhua
ENSSTOG00000004539	URB1	99	56.381	ENSGALG00000015887	URB1	99	56.468	Gallus_gallus
ENSSTOG00000004539	URB1	94	52.215	ENSGAFG00000020694	urb1	97	53.037	Gambusia_affinis
ENSSTOG00000004539	URB1	98	44.773	ENSGACG00000011703	urb1	99	44.773	Gasterosteus_aculeatus
ENSSTOG00000004539	URB1	99	57.771	ENSGAGG00000022544	URB1	99	58.043	Gopherus_agassizii
ENSSTOG00000004539	URB1	100	83.648	ENSGGOG00000000285	URB1	100	83.648	Gorilla_gorilla
ENSSTOG00000004539	URB1	99	44.694	ENSHBUG00000001904	urb1	99	44.808	Haplochromis_burtoni
ENSSTOG00000004539	URB1	99	80.113	ENSHGLG00000004907	URB1	99	80.113	Heterocephalus_glaber_female
ENSSTOG00000004539	URB1	99	80.774	ENSHGLG00100010749	URB1	99	80.730	Heterocephalus_glaber_male
ENSSTOG00000004539	URB1	73	47.255	ENSHCOG00000018683	urb1	96	48.039	Hippocampus_comes
ENSSTOG00000004539	URB1	99	40.281	ENSIPUG00000014721	urb1	99	40.335	Ictalurus_punctatus
ENSSTOG00000004539	URB1	98	42.462	ENSKMAG00000006001	urb1	97	47.331	Kryptolebias_marmoratus
ENSSTOG00000004539	URB1	93	51.116	ENSLBEG00000027208	urb1	97	51.672	Labrus_bergylta
ENSSTOG00000004539	URB1	99	47.757	ENSLACG00000017059	URB1	99	48.166	Latimeria_chalumnae
ENSSTOG00000004539	URB1	99	45.979	ENSLOCG00000009190	urb1	99	46.012	Lepisosteus_oculatus
ENSSTOG00000004539	URB1	99	77.011	ENSLAFG00000010407	URB1	99	77.244	Loxodonta_africana
ENSSTOG00000004539	URB1	100	82.769	ENSMFAG00000034391	URB1	97	82.769	Macaca_fascicularis
ENSSTOG00000004539	URB1	100	82.549	ENSMMUG00000010295	URB1	100	82.549	Macaca_mulatta
ENSSTOG00000004539	URB1	100	81.319	ENSMNEG00000032981	URB1	100	81.319	Macaca_nemestrina
ENSSTOG00000004539	URB1	100	82.857	ENSMLEG00000041435	URB1	100	82.857	Mandrillus_leucophaeus
ENSSTOG00000004539	URB1	98	43.739	ENSMAMG00000011238	urb1	97	43.583	Mastacembelus_armatus
ENSSTOG00000004539	URB1	99	40.026	ENSMZEG00005011862	urb1	99	41.758	Maylandia_zebra
ENSSTOG00000004539	URB1	98	56.673	ENSMGAG00000014512	URB1	99	56.673	Meleagris_gallopavo
ENSSTOG00000004539	URB1	94	80.146	ENSMAUG00000010516	Urb1	99	80.547	Mesocricetus_auratus
ENSSTOG00000004539	URB1	99	81.770	ENSMICG00000016424	URB1	99	81.907	Microcebus_murinus
ENSSTOG00000004539	URB1	99	75.616	ENSMOCG00000012613	Urb1	99	75.902	Microtus_ochrogaster
ENSSTOG00000004539	URB1	99	63.939	ENSMODG00000021076	URB1	99	64.083	Monodelphis_domestica
ENSSTOG00000004539	URB1	94	51.543	ENSMALG00000017411	urb1	96	52.535	Monopterus_albus
ENSSTOG00000004539	URB1	99	75.561	MGP_CAROLIEiJ_G0020948	Urb1	99	75.561	Mus_caroli
ENSSTOG00000004539	URB1	99	76.134	ENSMUSG00000039929	Urb1	99	76.134	Mus_musculus
ENSSTOG00000004539	URB1	99	75.870	MGP_PahariEiJ_G0016653	Urb1	99	75.870	Mus_pahari
ENSSTOG00000004539	URB1	99	75.782	MGP_SPRETEiJ_G0021854	Urb1	99	75.782	Mus_spretus
ENSSTOG00000004539	URB1	100	79.165	ENSMPUG00000001123	URB1	100	79.165	Mustela_putorius_furo
ENSSTOG00000004539	URB1	99	77.905	ENSNGAG00000001905	Urb1	99	78.040	Nannospalax_galili
ENSSTOG00000004539	URB1	82	44.654	ENSNBRG00000001049	urb1	98	45.168	Neolamprologus_brichardi
ENSSTOG00000004539	URB1	99	81.465	ENSNLEG00000026872	URB1	100	81.275	Nomascus_leucogenys
ENSSTOG00000004539	URB1	93	66.603	ENSMEUG00000010828	URB1	95	59.038	Notamacropus_eugenii
ENSSTOG00000004539	URB1	99	74.206	ENSOPRG00000013482	URB1	99	74.431	Ochotona_princeps
ENSSTOG00000004539	URB1	100	79.965	ENSODEG00000002587	URB1	99	79.965	Octodon_degus
ENSSTOG00000004539	URB1	99	44.600	ENSONIG00000005599	urb1	99	44.931	Oreochromis_niloticus
ENSSTOG00000004539	URB1	99	80.485	ENSOCUG00000009381	URB1	99	80.485	Oryctolagus_cuniculus
ENSSTOG00000004539	URB1	99	43.518	ENSORLG00000003429	urb1	99	43.670	Oryzias_latipes
ENSSTOG00000004539	URB1	99	43.393	ENSORLG00020013785	urb1	99	43.543	Oryzias_latipes_hni
ENSSTOG00000004539	URB1	99	42.209	ENSORLG00015019421	urb1	98	49.721	Oryzias_latipes_hsok
ENSSTOG00000004539	URB1	76	50.405	ENSOMEG00000002094	urb1	97	50.580	Oryzias_melastigma
ENSSTOG00000004539	URB1	99	81.057	ENSOGAG00000017140	URB1	99	81.409	Otolemur_garnettii
ENSSTOG00000004539	URB1	97	77.768	ENSOARG00000013679	URB1	99	77.684	Ovis_aries
ENSSTOG00000004539	URB1	100	83.824	ENSPPAG00000003423	URB1	100	83.824	Pan_paniscus
ENSSTOG00000004539	URB1	100	80.000	ENSPPRG00000023131	URB1	100	80.000	Panthera_pardus
ENSSTOG00000004539	URB1	92	78.976	ENSPTIG00000016125	URB1	96	80.080	Panthera_tigris_altaica
ENSSTOG00000004539	URB1	100	83.692	ENSPTRG00000013852	URB1	100	83.692	Pan_troglodytes
ENSSTOG00000004539	URB1	100	82.901	ENSPANG00000021964	URB1	100	82.901	Papio_anubis
ENSSTOG00000004539	URB1	97	46.244	ENSPKIG00000003683	urb1	96	46.109	Paramormyrops_kingsleyae
ENSSTOG00000004539	URB1	99	76.930	ENSPEMG00000021205	Urb1	99	76.930	Peromyscus_maniculatus_bairdii
ENSSTOG00000004539	URB1	80	33.246	ENSPMAG00000009733	URB1	99	34.101	Petromyzon_marinus
ENSSTOG00000004539	URB1	99	63.398	ENSPCIG00000016350	URB1	99	64.071	Phascolarctos_cinereus
ENSSTOG00000004539	URB1	96	43.401	ENSPLAG00000004371	urb1	99	43.401	Poecilia_latipinna
ENSSTOG00000004539	URB1	99	43.767	ENSPMEG00000006634	urb1	98	44.052	Poecilia_mexicana
ENSSTOG00000004539	URB1	99	44.005	ENSPREG00000013453	urb1	98	44.340	Poecilia_reticulata
ENSSTOG00000004539	URB1	99	83.142	ENSPPYG00000011359	URB1	100	82.945	Pongo_abelii
ENSSTOG00000004539	URB1	99	66.241	ENSPCAG00000007430	URB1	98	66.429	Procavia_capensis
ENSSTOG00000004539	URB1	100	82.762	ENSPCOG00000022695	URB1	99	82.866	Propithecus_coquereli
ENSSTOG00000004539	URB1	99	78.987	ENSPVAG00000000889	URB1	99	78.987	Pteropus_vampyrus
ENSSTOG00000004539	URB1	99	43.335	ENSPNYG00000010589	urb1	99	43.444	Pundamilia_nyererei
ENSSTOG00000004539	URB1	99	40.167	ENSPNAG00000019324	urb1	99	40.203	Pygocentrus_nattereri
ENSSTOG00000004539	URB1	99	75.968	ENSRNOG00000002080	Urb1	99	76.056	Rattus_norvegicus
ENSSTOG00000004539	URB1	100	82.637	ENSRBIG00000033122	URB1	100	82.637	Rhinopithecus_bieti
ENSSTOG00000004539	URB1	100	82.725	ENSRROG00000040237	URB1	100	82.725	Rhinopithecus_roxellana
ENSSTOG00000004539	URB1	100	82.689	ENSSBOG00000027672	URB1	100	82.689	Saimiri_boliviensis_boliviensis
ENSSTOG00000004539	URB1	99	63.446	ENSSHAG00000005140	URB1	99	63.628	Sarcophilus_harrisii
ENSSTOG00000004539	URB1	93	45.814	ENSSFOG00015000339	urb1	98	46.187	Scleropages_formosus
ENSSTOG00000004539	URB1	98	44.567	ENSSMAG00000003782	urb1	99	44.425	Scophthalmus_maximus
ENSSTOG00000004539	URB1	99	45.300	ENSSDUG00000012313	urb1	99	45.507	Seriola_dumerili
ENSSTOG00000004539	URB1	99	45.253	ENSSLDG00000023179	urb1	99	45.503	Seriola_lalandi_dorsalis
ENSSTOG00000004539	URB1	99	54.462	ENSSPUG00000012447	URB1	98	55.015	Sphenodon_punctatus
ENSSTOG00000004539	URB1	99	44.150	ENSSPAG00000006325	urb1	99	44.562	Stegastes_partitus
ENSSTOG00000004539	URB1	100	77.700	ENSSSCG00000032024	URB1	100	77.700	Sus_scrofa
ENSSTOG00000004539	URB1	74	58.617	ENSTGUG00000013442	URB1	100	58.617	Taeniopygia_guttata
ENSSTOG00000004539	URB1	99	43.354	ENSTRUG00000009372	urb1	99	43.448	Takifugu_rubripes
ENSSTOG00000004539	URB1	99	43.197	ENSTNIG00000016277	urb1	99	43.229	Tetraodon_nigroviridis
ENSSTOG00000004539	URB1	81	84.393	ENSTBEG00000010044	URB1	81	84.393	Tupaia_belangeri
ENSSTOG00000004539	URB1	90	79.541	ENSTTRG00000007712	URB1	92	79.854	Tursiops_truncatus
ENSSTOG00000004539	URB1	100	79.604	ENSUAMG00000012231	URB1	99	79.604	Ursus_americanus
ENSSTOG00000004539	URB1	95	79.600	ENSUMAG00000017419	URB1	98	81.107	Ursus_maritimus
ENSSTOG00000004539	URB1	68	90.476	ENSVPAG00000001164	URB1	68	90.476	Vicugna_pacos
ENSSTOG00000004539	URB1	100	79.806	ENSVVUG00000000551	URB1	100	79.806	Vulpes_vulpes
ENSSTOG00000004539	URB1	99	50.000	ENSXETG00000009895	urb1	99	50.262	Xenopus_tropicalis
ENSSTOG00000004539	URB1	99	40.921	ENSXCOG00000005500	urb1	96	46.001	Xiphophorus_couchianus
ENSSTOG00000004539	URB1	99	41.133	ENSXMAG00000007253	urb1	96	45.973	Xiphophorus_maculatus