EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000004727 (Gene tree)
Gene ID: 101962643
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 164493 bases
Position: chrJH393292.1:7852327-8016819
Accession: 101962643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000027486	RRM_1	PF00076.22	2.1e-38	1	3
ENSSTOP00000027486	RRM_1	PF00076.22	2.1e-38	2	3
ENSSTOP00000027486	RRM_1	PF00076.22	2.1e-38	3	3
ENSSTOP00000004238	RRM_1	PF00076.22	3.4e-38	1	3
ENSSTOP00000004238	RRM_1	PF00076.22	3.4e-38	2	3
ENSSTOP00000004238	RRM_1	PF00076.22	3.4e-38	3	3
ENSSTOP00000026961	RRM_1	PF00076.22	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000032727	RBM47-202	4349	-	ENSSTOP00000027486	526 (aa)	-	A0A287D1L9
ENSSTOT00000004722	RBM47-201	4556	XM_013356275	ENSSTOP00000004238	595 (aa)	XP_013211729	I3M4R8
ENSSTOT00000039047	RBM47-203	4710	XM_021722744	ENSSTOP00000026961	158 (aa)	XP_021578419	A0A287D0B1

Gene Model

Click here to download ENSSTOG00000004727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000004727	RBM47	81	50.000	ENSSTOG00000002000	DND1	58	42.439
ENSSTOG00000004727	RBM47	84	76.515	ENSSTOG00000007918	RBM46	64	73.667
ENSSTOG00000004727	RBM47	88	57.746	ENSSTOG00000021981	HNRNPR	70	45.657
ENSSTOG00000004727	RBM47	76	62.500	ENSSTOG00000005763	-	96	63.248
ENSSTOG00000004727	RBM47	97	47.799	ENSSTOG00000009962	SYNCRIP	73	56.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000004727	RBM47	100	97.148	ENSG00000163694	RBM47	100	97.666	Homo_sapiens
ENSSTOG00000004727	RBM47	100	83.820	ENSAPOG00000011062	rbm47	100	81.167	Acanthochromis_polyacanthus
ENSSTOG00000004727	RBM47	100	96.147	ENSAMEG00000009672	RBM47	100	96.147	Ailuropoda_melanoleuca
ENSSTOG00000004727	RBM47	100	83.820	ENSACIG00000011531	rbm47	100	81.167	Amphilophus_citrinellus
ENSSTOG00000004727	RBM47	100	81.330	ENSAOCG00000022245	rbm47	100	81.167	Amphiprion_ocellaris
ENSSTOG00000004727	RBM47	100	81.330	ENSAPEG00000018304	rbm47	100	81.167	Amphiprion_percula
ENSSTOG00000004727	RBM47	100	81.748	ENSATEG00000018400	rbm47	94	83.754	Anabas_testudineus
ENSSTOG00000004727	RBM47	100	87.975	ENSAPLG00000013974	RBM47	100	87.270	Anas_platyrhynchos
ENSSTOG00000004727	RBM47	100	86.207	ENSACAG00000011833	RBM47	100	85.333	Anolis_carolinensis
ENSSTOG00000004727	RBM47	100	96.578	ENSANAG00000029440	RBM47	100	96.578	Aotus_nancymaae
ENSSTOG00000004727	RBM47	100	82.687	ENSACLG00000016902	rbm47	94	85.070	Astatotilapia_calliptera
ENSSTOG00000004727	RBM47	100	76.471	ENSAMXG00000021794	rbm47	95	83.520	Astyanax_mexicanus
ENSSTOG00000004727	RBM47	100	96.980	ENSBTAG00000002356	RBM47	100	96.980	Bos_taurus
ENSSTOG00000004727	RBM47	100	96.395	ENSCJAG00000019385	RBM47	100	96.395	Callithrix_jacchus
ENSSTOG00000004727	RBM47	96	93.892	ENSCAFG00000015898	RBM47	100	92.630	Canis_familiaris
ENSSTOG00000004727	RBM47	86	92.647	ENSCAFG00020010558	RBM47	94	94.366	Canis_lupus_dingo
ENSSTOG00000004727	RBM47	100	96.644	ENSCHIG00000026214	RBM47	100	96.644	Capra_hircus
ENSSTOG00000004727	RBM47	86	79.256	ENSTSYG00000033612	RBM47	92	89.381	Carlito_syrichta
ENSSTOG00000004727	RBM47	100	91.391	ENSCAPG00000008426	RBM47	100	92.715	Cavia_aperea
ENSSTOG00000004727	RBM47	100	96.533	ENSCPOG00000014100	RBM47	100	96.533	Cavia_porcellus
ENSSTOG00000004727	RBM47	99	66.054	ENSCCAG00000024397	-	99	64.716	Cebus_capucinus
ENSSTOG00000004727	RBM47	100	96.395	ENSCCAG00000030129	-	100	96.395	Cebus_capucinus
ENSSTOG00000004727	RBM47	100	96.958	ENSCATG00000042064	RBM47	100	96.958	Cercocebus_atys
ENSSTOG00000004727	RBM47	100	95.462	ENSCLAG00000001684	RBM47	100	96.267	Chinchilla_lanigera
ENSSTOG00000004727	RBM47	100	96.807	ENSCSAG00000017060	RBM47	100	96.807	Chlorocebus_sabaeus
ENSSTOG00000004727	RBM47	100	96.226	ENSCHOG00000011731	RBM47	88	87.865	Choloepus_hoffmanni
ENSSTOG00000004727	RBM47	100	88.833	ENSCPBG00000013831	RBM47	100	89.000	Chrysemys_picta_bellii
ENSSTOG00000004727	RBM47	100	96.768	ENSCANG00000019997	RBM47	100	96.768	Colobus_angolensis_palliatus
ENSSTOG00000004727	RBM47	100	88.091	ENSCGRG00001020102	-	100	86.957	Cricetulus_griseus_chok1gshd
ENSSTOG00000004727	RBM47	100	94.444	ENSCGRG00001000623	-	100	92.295	Cricetulus_griseus_chok1gshd
ENSSTOG00000004727	RBM47	100	93.915	ENSCGRG00000007762	-	100	93.671	Cricetulus_griseus_crigri
ENSSTOG00000004727	RBM47	100	87.713	ENSCGRG00000014760	-	100	86.578	Cricetulus_griseus_crigri
ENSSTOG00000004727	RBM47	100	78.481	ENSCSEG00000004545	rbm47	100	73.877	Cynoglossus_semilaevis
ENSSTOG00000004727	RBM47	100	82.278	ENSCVAG00000020144	rbm47	93	84.746	Cyprinodon_variegatus
ENSSTOG00000004727	RBM47	100	75.980	ENSDARG00000061985	rbm47	95	76.857	Danio_rerio
ENSSTOG00000004727	RBM47	100	94.937	ENSDNOG00000046854	RBM47	100	93.121	Dasypus_novemcinctus
ENSSTOG00000004727	RBM47	100	94.304	ENSDORG00000010144	Rbm47	100	93.489	Dipodomys_ordii
ENSSTOG00000004727	RBM47	100	93.823	ENSETEG00000009194	RBM47	100	93.155	Echinops_telfairi
ENSSTOG00000004727	RBM47	100	65.839	ENSEBUG00000011912	rbm47	95	58.406	Eptatretus_burgeri
ENSSTOG00000004727	RBM47	100	96.980	ENSEASG00005008443	RBM47	100	96.980	Equus_asinus_asinus
ENSSTOG00000004727	RBM47	100	96.980	ENSECAG00000004400	RBM47	100	96.980	Equus_caballus
ENSSTOG00000004727	RBM47	100	91.824	ENSEEUG00000001194	RBM47	75	94.805	Erinaceus_europaeus
ENSSTOG00000004727	RBM47	100	80.506	ENSELUG00000006148	rbm47	93	85.515	Esox_lucius
ENSSTOG00000004727	RBM47	100	96.471	ENSFCAG00000012399	RBM47	100	96.471	Felis_catus
ENSSTOG00000004727	RBM47	100	90.134	ENSFALG00000002861	RBM47	100	89.632	Ficedula_albicollis
ENSSTOG00000004727	RBM47	100	93.109	ENSFDAG00000016326	RBM47	100	93.277	Fukomys_damarensis
ENSSTOG00000004727	RBM47	100	81.443	ENSFHEG00000007938	rbm47	100	74.791	Fundulus_heteroclitus
ENSSTOG00000004727	RBM47	100	80.759	ENSGMOG00000014802	rbm47	94	75.779	Gadus_morhua
ENSSTOG00000004727	RBM47	100	87.342	ENSGALG00000014267	RBM47	100	90.981	Gallus_gallus
ENSSTOG00000004727	RBM47	94	83.444	ENSGAFG00000020571	rbm47	98	81.867	Gambusia_affinis
ENSSTOG00000004727	RBM47	100	80.307	ENSGACG00000016223	rbm47	93	82.817	Gasterosteus_aculeatus
ENSSTOG00000004727	RBM47	100	89.000	ENSGAGG00000020051	RBM47	100	89.167	Gopherus_agassizii
ENSSTOG00000004727	RBM47	100	96.958	ENSGGOG00000001367	RBM47	100	96.958	Gorilla_gorilla
ENSSTOG00000004727	RBM47	100	82.687	ENSHBUG00000003520	rbm47	94	85.070	Haplochromis_burtoni
ENSSTOG00000004727	RBM47	100	94.304	ENSHGLG00000016914	RBM47	100	94.304	Heterocephalus_glaber_female
ENSSTOG00000004727	RBM47	99	85.987	ENSHGLG00100003071	-	100	83.866	Heterocephalus_glaber_male
ENSSTOG00000004727	RBM47	100	94.304	ENSHGLG00100014028	-	100	94.304	Heterocephalus_glaber_male
ENSSTOG00000004727	RBM47	100	79.375	ENSHCOG00000002074	rbm47	93	83.662	Hippocampus_comes
ENSSTOG00000004727	RBM47	100	80.362	ENSIPUG00000004743	rbm47	100	80.637	Ictalurus_punctatus
ENSSTOG00000004727	RBM47	100	93.635	ENSJJAG00000013823	Rbm47	100	94.137	Jaculus_jaculus
ENSSTOG00000004727	RBM47	100	81.122	ENSKMAG00000000084	rbm47	93	83.944	Kryptolebias_marmoratus
ENSSTOG00000004727	RBM47	100	81.867	ENSLBEG00000008436	rbm47	93	81.972	Labrus_bergylta
ENSSTOG00000004727	RBM47	100	87.268	ENSLACG00000007196	RBM47	100	84.281	Latimeria_chalumnae
ENSSTOG00000004727	RBM47	100	85.443	ENSLOCG00000012966	rbm47	95	80.268	Lepisosteus_oculatus
ENSSTOG00000004727	RBM47	100	94.631	ENSLAFG00000011998	RBM47	100	93.456	Loxodonta_africana
ENSSTOG00000004727	RBM47	100	96.958	ENSMFAG00000037967	RBM47	100	96.958	Macaca_fascicularis
ENSSTOG00000004727	RBM47	100	96.807	ENSMMUG00000012036	RBM47	100	96.891	Macaca_mulatta
ENSSTOG00000004727	RBM47	100	96.768	ENSMNEG00000040774	RBM47	100	96.768	Macaca_nemestrina
ENSSTOG00000004727	RBM47	100	98.095	ENSMLEG00000041432	RBM47	100	98.095	Mandrillus_leucophaeus
ENSSTOG00000004727	RBM47	100	82.474	ENSMAMG00000019143	rbm47	95	83.754	Mastacembelus_armatus
ENSSTOG00000004727	RBM47	100	82.687	ENSMZEG00005023659	rbm47	93	85.070	Maylandia_zebra
ENSSTOG00000004727	RBM47	100	89.333	ENSMGAG00000012226	RBM47	100	89.167	Meleagris_gallopavo
ENSSTOG00000004727	RBM47	100	93.671	ENSMAUG00000006493	Rbm47	100	93.671	Mesocricetus_auratus
ENSSTOG00000004727	RBM47	100	87.899	ENSMICG00000026417	RBM47	100	87.563	Microcebus_murinus
ENSSTOG00000004727	RBM47	100	94.304	ENSMOCG00000021170	Rbm47	100	94.304	Microtus_ochrogaster
ENSSTOG00000004727	RBM47	100	81.186	ENSMMOG00000007260	rbm47	95	81.793	Mola_mola
ENSSTOG00000004727	RBM47	100	84.177	ENSMODG00000020561	-	100	79.832	Monodelphis_domestica
ENSSTOG00000004727	RBM47	87	81.119	ENSMODG00000015426	-	97	79.421	Monodelphis_domestica
ENSSTOG00000004727	RBM47	100	91.733	ENSMODG00000007003	RBM47	100	90.252	Monodelphis_domestica
ENSSTOG00000004727	RBM47	100	79.692	ENSMALG00000005167	rbm47	100	81.167	Monopterus_albus
ENSSTOG00000004727	RBM47	100	93.121	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.121	Mus_caroli
ENSSTOG00000004727	RBM47	100	93.456	ENSMUSG00000070780	Rbm47	100	93.456	Mus_musculus
ENSSTOG00000004727	RBM47	100	93.456	MGP_PahariEiJ_G0017040	Rbm47	100	93.456	Mus_pahari
ENSSTOG00000004727	RBM47	100	92.953	MGP_SPRETEiJ_G0028253	Rbm47	100	92.953	Mus_spretus
ENSSTOG00000004727	RBM47	100	96.807	ENSMPUG00000006177	RBM47	94	96.807	Mustela_putorius_furo
ENSSTOG00000004727	RBM47	100	93.671	ENSMLUG00000000889	RBM47	100	91.457	Myotis_lucifugus
ENSSTOG00000004727	RBM47	100	96.203	ENSNGAG00000003325	Rbm47	100	93.960	Nannospalax_galili
ENSSTOG00000004727	RBM47	100	82.429	ENSNBRG00000015092	rbm47	95	78.411	Neolamprologus_brichardi
ENSSTOG00000004727	RBM47	100	96.578	ENSNLEG00000017151	RBM47	100	96.578	Nomascus_leucogenys
ENSSTOG00000004727	RBM47	89	92.199	ENSMEUG00000009516	-	99	86.792	Notamacropus_eugenii
ENSSTOG00000004727	RBM47	85	96.680	ENSOPRG00000016507	-	75	96.680	Ochotona_princeps
ENSSTOG00000004727	RBM47	100	96.533	ENSODEG00000004873	RBM47	100	95.966	Octodon_degus
ENSSTOG00000004727	RBM47	100	77.805	ENSONIG00000009061	rbm47	94	76.684	Oreochromis_niloticus
ENSSTOG00000004727	RBM47	100	85.880	ENSOANG00000008978	RBM47	100	86.711	Ornithorhynchus_anatinus
ENSSTOG00000004727	RBM47	100	95.302	ENSOCUG00000012034	RBM47	100	95.302	Oryctolagus_cuniculus
ENSSTOG00000004727	RBM47	100	83.598	ENSORLG00000005847	rbm47	100	80.902	Oryzias_latipes
ENSSTOG00000004727	RBM47	100	83.598	ENSORLG00020005154	rbm47	100	80.902	Oryzias_latipes_hni
ENSSTOG00000004727	RBM47	100	83.862	ENSORLG00015000066	rbm47	100	81.167	Oryzias_latipes_hsok
ENSSTOG00000004727	RBM47	100	81.701	ENSOMEG00000010730	rbm47	100	80.902	Oryzias_melastigma
ENSSTOG00000004727	RBM47	100	96.835	ENSOGAG00000029367	-	100	96.807	Otolemur_garnettii
ENSSTOG00000004727	RBM47	100	88.800	ENSOGAG00000025193	-	100	86.387	Otolemur_garnettii
ENSSTOG00000004727	RBM47	100	88.629	ENSOARG00000012711	RBM47	100	88.629	Ovis_aries
ENSSTOG00000004727	RBM47	100	96.639	ENSPPAG00000029763	RBM47	100	96.639	Pan_paniscus
ENSSTOG00000004727	RBM47	100	96.203	ENSPPRG00000012873	RBM47	100	97.333	Panthera_pardus
ENSSTOG00000004727	RBM47	85	92.688	ENSPTIG00000017046	RBM47	100	92.688	Panthera_tigris_altaica
ENSSTOG00000004727	RBM47	100	96.958	ENSPTRG00000016006	RBM47	100	96.958	Pan_troglodytes
ENSSTOG00000004727	RBM47	100	96.958	ENSPANG00000005980	RBM47	100	96.958	Papio_anubis
ENSSTOG00000004727	RBM47	100	79.747	ENSPKIG00000013431	RBM47	92	86.158	Paramormyrops_kingsleyae
ENSSTOG00000004727	RBM47	96	77.668	ENSPKIG00000005037	rbm47	100	78.182	Paramormyrops_kingsleyae
ENSSTOG00000004727	RBM47	100	88.608	ENSPSIG00000017516	RBM47	97	89.662	Pelodiscus_sinensis
ENSSTOG00000004727	RBM47	100	79.747	ENSPMGG00000018540	rbm47	100	74.457	Periophthalmus_magnuspinnatus
ENSSTOG00000004727	RBM47	100	94.304	ENSPEMG00000011088	Rbm47	100	93.960	Peromyscus_maniculatus_bairdii
ENSSTOG00000004727	RBM47	100	77.011	ENSPFOG00000007997	rbm47	94	82.825	Poecilia_formosa
ENSSTOG00000004727	RBM47	100	80.380	ENSPLAG00000002072	rbm47	100	80.533	Poecilia_latipinna
ENSSTOG00000004727	RBM47	100	81.586	ENSPMEG00000017492	rbm47	100	80.371	Poecilia_mexicana
ENSSTOG00000004727	RBM47	100	81.586	ENSPREG00000008456	rbm47	100	80.800	Poecilia_reticulata
ENSSTOG00000004727	RBM47	98	82.572	ENSPPYG00000014688	RBM47	98	82.302	Pongo_abelii
ENSSTOG00000004727	RBM47	100	94.304	ENSPCAG00000011879	RBM47	81	96.500	Procavia_capensis
ENSSTOG00000004727	RBM47	100	91.933	ENSPCOG00000023451	RBM47	100	91.933	Propithecus_coquereli
ENSSTOG00000004727	RBM47	100	94.304	ENSPVAG00000003812	RBM47	100	93.802	Pteropus_vampyrus
ENSSTOG00000004727	RBM47	100	82.687	ENSPNYG00000022868	rbm47	95	78.485	Pundamilia_nyererei
ENSSTOG00000004727	RBM47	100	75.244	ENSPNAG00000007940	rbm47	95	84.358	Pygocentrus_nattereri
ENSSTOG00000004727	RBM47	100	93.960	ENSRNOG00000002408	Rbm47	100	93.960	Rattus_norvegicus
ENSSTOG00000004727	RBM47	100	96.768	ENSRBIG00000039601	RBM47	100	96.768	Rhinopithecus_bieti
ENSSTOG00000004727	RBM47	100	96.768	ENSRROG00000044696	RBM47	100	96.768	Rhinopithecus_roxellana
ENSSTOG00000004727	RBM47	100	95.570	ENSSBOG00000028475	RBM47	100	96.488	Saimiri_boliviensis_boliviensis
ENSSTOG00000004727	RBM47	100	90.924	ENSSHAG00000017576	RBM47	100	90.924	Sarcophilus_harrisii
ENSSTOG00000004727	RBM47	100	72.781	ENSSFOG00015012445	rbm47	100	76.413	Scleropages_formosus
ENSSTOG00000004727	RBM47	100	79.114	ENSSFOG00015024101	RBM47	100	73.045	Scleropages_formosus
ENSSTOG00000004727	RBM47	100	80.206	ENSSMAG00000009744	rbm47	94	81.972	Scophthalmus_maximus
ENSSTOG00000004727	RBM47	100	80.380	ENSSDUG00000022684	rbm47	100	80.902	Seriola_dumerili
ENSSTOG00000004727	RBM47	100	80.506	ENSSLDG00000003109	rbm47	93	83.708	Seriola_lalandi_dorsalis
ENSSTOG00000004727	RBM47	100	94.304	ENSSARG00000001735	RBM47	75	94.196	Sorex_araneus
ENSSTOG00000004727	RBM47	100	86.455	ENSSPUG00000007515	RBM47	100	88.267	Sphenodon_punctatus
ENSSTOG00000004727	RBM47	100	81.841	ENSSPAG00000001257	rbm47	100	81.432	Stegastes_partitus
ENSSTOG00000004727	RBM47	100	96.477	ENSSSCG00000008796	RBM47	100	96.477	Sus_scrofa
ENSSTOG00000004727	RBM47	100	89.130	ENSTGUG00000008705	RBM47	100	88.629	Taeniopygia_guttata
ENSSTOG00000004727	RBM47	100	80.380	ENSTRUG00000014050	rbm47	100	73.790	Takifugu_rubripes
ENSSTOG00000004727	RBM47	100	75.693	ENSTNIG00000006127	rbm47	94	76.644	Tetraodon_nigroviridis
ENSSTOG00000004727	RBM47	100	94.937	ENSTBEG00000001607	RBM47	76	89.867	Tupaia_belangeri
ENSSTOG00000004727	RBM47	100	95.638	ENSTTRG00000002839	RBM47	100	95.638	Tursiops_truncatus
ENSSTOG00000004727	RBM47	100	96.639	ENSUAMG00000021346	RBM47	100	96.639	Ursus_americanus
ENSSTOG00000004727	RBM47	92	95.890	ENSVPAG00000000641	-	57	95.890	Vicugna_pacos
ENSSTOG00000004727	RBM47	96	94.241	ENSVVUG00000014774	RBM47	100	92.797	Vulpes_vulpes
ENSSTOG00000004727	RBM47	100	84.615	ENSXETG00000012802	rbm47	100	83.612	Xenopus_tropicalis
ENSSTOG00000004727	RBM47	94	83.444	ENSXCOG00000000780	rbm47	100	80.533	Xiphophorus_couchianus
ENSSTOG00000004727	RBM47	98	83.967	ENSXMAG00000009874	rbm47	93	83.898	Xiphophorus_maculatus