EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSTOG00000004741 (Gene tree)
Gene ID
101965282
Gene Symbol
PRDM5
Alias
PFM2
Full Name
PR/SET domain 5
Gene Type
protein_coding
Species
Ictidomys_tridecemlineatus
Status
putative
Strand
Minus strand
Length
125592 bases
Position
chrJH393472.1:390894-516485
Accession
9349
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5918
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5928
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5938
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5948
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5958
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5968
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5978
ENSSTOP00000004269zf-C2H2PF00096.267.7e-5988
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4817
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4827
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4837
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4847
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4857
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4867
ENSSTOP00000024772zf-C2H2PF00096.266.1e-4877
ENSSTOP00000028513zf-C2H2PF00096.261.3e-4116
ENSSTOP00000028513zf-C2H2PF00096.261.3e-4126
ENSSTOP00000028513zf-C2H2PF00096.261.3e-4136
ENSSTOP00000028513zf-C2H2PF00096.261.3e-4146
ENSSTOP00000028513zf-C2H2PF00096.261.3e-4156
ENSSTOP00000028513zf-C2H2PF00096.261.3e-4166
ENSSTOP00000032077zf-C2H2PF00096.262.4e-2714
ENSSTOP00000032077zf-C2H2PF00096.262.4e-2724
ENSSTOP00000032077zf-C2H2PF00096.262.4e-2734
ENSSTOP00000032077zf-C2H2PF00096.262.4e-2744
ENSSTOP00000028513zf-metPF12874.71.7e-1914
ENSSTOP00000028513zf-metPF12874.71.7e-1924
ENSSTOP00000028513zf-metPF12874.71.7e-1934
ENSSTOP00000028513zf-metPF12874.71.7e-1944
ENSSTOP00000004269zf-metPF12874.71.6e-1814
ENSSTOP00000004269zf-metPF12874.71.6e-1824
ENSSTOP00000004269zf-metPF12874.71.6e-1834
ENSSTOP00000004269zf-metPF12874.71.6e-1844
ENSSTOP00000024772zf-metPF12874.72.3e-1613
ENSSTOP00000024772zf-metPF12874.72.3e-1623
ENSSTOP00000024772zf-metPF12874.72.3e-1633
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSTOT00000042174PRDM5-203573-ENSSTOP00000032077190 (aa)-A0A287DEV5
ENSSTOT00000034267PRDM5-2041413-ENSSTOP00000028513471 (aa)-A0A287D4N3
ENSSTOT00000032112PRDM5-2021155-ENSSTOP00000024772384 (aa)-A0A287CU10
ENSSTOT00000004755PRDM5-2011707XM_013363434ENSSTOP00000004269568 (aa)-I3M4T9
Gene Model
Click here to download ENSSTOG00000004741's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000004741's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSTOG00000004741PRDM58339.241ENSSTOG00000022105-8639.241
ENSSTOG00000004741PRDM58341.509ENSSTOG00000005866SNAI18741.509
ENSSTOG00000004741PRDM58142.963ENSSTOG00000026126ZNF6285940.741
ENSSTOG00000004741PRDM58637.143ENSSTOG00000028569ZNF4239937.143
ENSSTOG00000004741PRDM57946.667ENSSTOG00000022317ZFP16146.667
ENSSTOG00000004741PRDM58140.876ENSSTOG00000019944ZNF3198835.294
ENSSTOG00000004741PRDM58644.615ENSSTOG00000034297-6444.615
ENSSTOG00000004741PRDM59547.423ENSSTOG00000006987ZNF2367347.423
ENSSTOG00000004741PRDM58246.847ENSSTOG00000030403ZNF7685345.385
ENSSTOG00000004741PRDM59639.594ENSSTOG00000004642MYNN5139.594
ENSSTOG00000004741PRDM58748.544ENSSTOG00000023536-7448.544
ENSSTOG00000004741PRDM57748.739ENSSTOG00000030417-7848.739
ENSSTOG00000004741PRDM58744.800ENSSTOG00000013458ZNF1126545.000
ENSSTOG00000004741PRDM57938.788ENSSTOG00000009902ZNF3845838.235
ENSSTOG00000004741PRDM58145.390ENSSTOG00000024118-8045.390
ENSSTOG00000004741PRDM58640.650ENSSTOG00000020707PATZ15340.650
ENSSTOG00000004741PRDM56842.466ENSSTOG00000024979OVOL26342.466
ENSSTOG00000004741PRDM59339.500ENSSTOG00000000130ZNF6917844.348
ENSSTOG00000004741PRDM59648.077ENSSTOG00000005986PRDM125848.077
ENSSTOG00000004741PRDM57838.938ENSSTOG00000019390ZNF5268031.274
ENSSTOG00000004741PRDM57836.567ENSSTOG00000032944SCRT28336.036
ENSSTOG00000004741PRDM57939.000ENSSTOG00000019989ZFP647234.130
ENSSTOG00000004741PRDM58236.264ENSSTOG00000002015PRDM105432.432
ENSSTOG00000004741PRDM58249.254ENSSTOG00000003811ZEB26432.632
ENSSTOG00000004741PRDM57942.157ENSSTOG00000028743SNAI25342.157
ENSSTOG00000004741PRDM57744.068ENSSTOG00000000887ZNF7846634.568
ENSSTOG00000004741PRDM57836.697ENSSTOG00000013853GTF3A9839.535
ENSSTOG00000004741PRDM58743.023ENSSTOG00000025586ZNF8658432.932
ENSSTOG00000004741PRDM58347.273ENSSTOG00000026739ZNF27241.296
ENSSTOG00000004741PRDM58042.609ENSSTOG00000023716WT15341.284
ENSSTOG00000004741PRDM58441.925ENSSTOG00000034090ZNF2267541.925
ENSSTOG00000004741PRDM58237.209ENSSTOG00000027842MAZ8537.209
ENSSTOG00000004741PRDM58646.667ENSSTOG00000028612ZNF5749030.548
ENSSTOG00000004741PRDM58350.355ENSSTOG00000033893-7450.355
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSTOG00000004741PRDM510094.667ENSG00000138738PRDM59594.620Homo_sapiens
ENSSTOG00000004741PRDM510087.333ENSAPOG00000023220prdm59585.443Acanthochromis_polyacanthus
ENSSTOG00000004741PRDM59387.421ENSAMEG00000003050PRDM510087.421Ailuropoda_melanoleuca
ENSSTOG00000004741PRDM510085.443ENSACIG00000000406prdm59585.443Amphilophus_citrinellus
ENSSTOG00000004741PRDM510087.333ENSAOCG00000014806prdm59585.759Amphiprion_ocellaris
ENSSTOG00000004741PRDM59676.600ENSAPEG00000016846prdm59477.042Amphiprion_percula
ENSSTOG00000004741PRDM510087.333ENSATEG00000013829prdm59586.076Anabas_testudineus
ENSSTOG00000004741PRDM510088.000ENSAPLG00000013828PRDM510087.658Anas_platyrhynchos
ENSSTOG00000004741PRDM510087.658ENSACAG00000012999PRDM59587.658Anolis_carolinensis
ENSSTOG00000004741PRDM510096.316ENSANAG00000027411PRDM59594.304Aotus_nancymaae
ENSSTOG00000004741PRDM510087.333ENSACLG00000017996prdm59585.443Astatotilapia_calliptera
ENSSTOG00000004741PRDM58786.667ENSAMXG00000041864prdm58786.667Astyanax_mexicanus
ENSSTOG00000004741PRDM510093.671ENSBTAG00000012111PRDM59593.671Bos_taurus
ENSSTOG00000004741PRDM510095.789ENSCJAG00000003133PRDM59594.304Callithrix_jacchus
ENSSTOG00000004741PRDM59893.939ENSCAFG00000004179PRDM59694.472Canis_familiaris
ENSSTOG00000004741PRDM510094.304ENSCAFG00020017685PRDM59594.304Canis_lupus_dingo
ENSSTOG00000004741PRDM510093.671ENSCHIG00000018772PRDM59593.671Capra_hircus
ENSSTOG00000004741PRDM59995.833ENSTSYG00000009630PRDM59594.275Carlito_syrichta
ENSSTOG00000004741PRDM510096.842ENSCAPG00000015217PRDM510096.842Cavia_aperea
ENSSTOG00000004741PRDM510096.842ENSCPOG00000012883PRDM510096.842Cavia_porcellus
ENSSTOG00000004741PRDM510096.316ENSCCAG00000023157PRDM59594.620Cebus_capucinus
ENSSTOG00000004741PRDM510096.316ENSCATG00000042510PRDM59594.620Cercocebus_atys
ENSSTOG00000004741PRDM510096.842ENSCLAG00000005392PRDM510096.842Chinchilla_lanigera
ENSSTOG00000004741PRDM510094.667ENSCSAG00000003729PRDM59594.620Chlorocebus_sabaeus
ENSSTOG00000004741PRDM510094.000ENSCHOG00000007801PRDM58094.000Choloepus_hoffmanni
ENSSTOG00000004741PRDM510088.000ENSCPBG00000024735PRDM59587.975Chrysemys_picta_bellii
ENSSTOG00000004741PRDM510096.316ENSCANG00000036807PRDM59594.620Colobus_angolensis_palliatus
ENSSTOG00000004741PRDM510095.263ENSCGRG00001010581Prdm59394.531Cricetulus_griseus_chok1gshd
ENSSTOG00000004741PRDM510094.000ENSCGRG00000010996-9994.834Cricetulus_griseus_crigri
ENSSTOG00000004741PRDM510086.667ENSCSEG00000019979prdm59585.127Cynoglossus_semilaevis
ENSSTOG00000004741PRDM510087.333ENSCVAG00000013692prdm59087.333Cyprinodon_variegatus
ENSSTOG00000004741PRDM59889.041ENSDARG00000006288prdm59585.897Danio_rerio
ENSSTOG00000004741PRDM510092.053ENSDNOG00000002009PRDM510093.375Dasypus_novemcinctus
ENSSTOG00000004741PRDM510094.792ENSDORG00000007739Prdm59394.792Dipodomys_ordii
ENSSTOG00000004741PRDM510093.162ENSETEG00000020268PRDM59081.890Echinops_telfairi
ENSSTOG00000004741PRDM59987.919ENSEBUG00000004301prdm59583.492Eptatretus_burgeri
ENSSTOG00000004741PRDM510095.789ENSEASG00005018365PRDM59594.304Equus_asinus_asinus
ENSSTOG00000004741PRDM510093.913ENSECAG00000011516PRDM59490.265Equus_caballus
ENSSTOG00000004741PRDM510083.377ENSECAG00000024747-9283.377Equus_caballus
ENSSTOG00000004741PRDM59993.750ENSEEUG00000010306PRDM59592.748Erinaceus_europaeus
ENSSTOG00000004741PRDM59993.443ENSELUG00000005894prdm58393.443Esox_lucius
ENSSTOG00000004741PRDM510093.987ENSFCAG00000025656PRDM59593.987Felis_catus
ENSSTOG00000004741PRDM59968.966ENSFALG00000008381PRDM59068.966Ficedula_albicollis
ENSSTOG00000004741PRDM510096.316ENSFDAG00000021361PRDM59594.620Fukomys_damarensis
ENSSTOG00000004741PRDM59889.041ENSFHEG00000013040prdm59586.218Fundulus_heteroclitus
ENSSTOG00000004741PRDM59191.176ENSGMOG00000012038prdm510093.333Gadus_morhua
ENSSTOG00000004741PRDM510088.000ENSGALG00000011963PRDM59587.342Gallus_gallus
ENSSTOG00000004741PRDM59793.443ENSGAFG00000019233prdm58493.443Gambusia_affinis
ENSSTOG00000004741PRDM59793.443ENSGAGG00000020362PRDM58993.443Gopherus_agassizii
ENSSTOG00000004741PRDM510096.316ENSGGOG00000013562PRDM59594.620Gorilla_gorilla
ENSSTOG00000004741PRDM510087.333ENSHBUG00000023375prdm59585.443Haplochromis_burtoni
ENSSTOG00000004741PRDM59693.939ENSHGLG00000003010PRDM59193.939Heterocephalus_glaber_female
ENSSTOG00000004741PRDM510096.842ENSHGLG00100003696PRDM59594.304Heterocephalus_glaber_male
ENSSTOG00000004741PRDM59987.919ENSHCOG00000012131prdm59585.443Hippocampus_comes
ENSSTOG00000004741PRDM59792.708ENSIPUG00000001248prdm59586.076Ictalurus_punctatus
ENSSTOG00000004741PRDM59997.059ENSJJAG00000011464Prdm59997.059Jaculus_jaculus
ENSSTOG00000004741PRDM510086.000ENSKMAG00000013663prdm59584.810Kryptolebias_marmoratus
ENSSTOG00000004741PRDM510087.333ENSLBEG00000022736prdm59585.759Labrus_bergylta
ENSSTOG00000004741PRDM510088.000ENSLACG00000009187PRDM59988.000Latimeria_chalumnae
ENSSTOG00000004741PRDM59987.919ENSLOCG00000009778prdm59585.127Lepisosteus_oculatus
ENSSTOG00000004741PRDM510093.333ENSLAFG00000006532PRDM59793.333Loxodonta_africana
ENSSTOG00000004741PRDM510096.316ENSMFAG00000045845PRDM59594.620Macaca_fascicularis
ENSSTOG00000004741PRDM510096.316ENSMMUG00000003249PRDM59594.620Macaca_mulatta
ENSSTOG00000004741PRDM510096.316ENSMNEG00000019018PRDM59594.620Macaca_nemestrina
ENSSTOG00000004741PRDM510094.667ENSMLEG00000023145PRDM510094.620Mandrillus_leucophaeus
ENSSTOG00000004741PRDM510086.667ENSMAMG00000013419prdm59585.443Mastacembelus_armatus
ENSSTOG00000004741PRDM510087.333ENSMZEG00005020645prdm59585.443Maylandia_zebra
ENSSTOG00000004741PRDM510088.000ENSMGAG00000010710PRDM510087.342Meleagris_gallopavo
ENSSTOG00000004741PRDM510095.263ENSMAUG00000006768Prdm59394.531Mesocricetus_auratus
ENSSTOG00000004741PRDM510096.316ENSMICG00000001459PRDM59594.937Microcebus_murinus
ENSSTOG00000004741PRDM59997.059ENSMOCG00000016267Prdm59593.671Microtus_ochrogaster
ENSSTOG00000004741PRDM510087.333ENSMMOG00000006035prdm59585.127Mola_mola
ENSSTOG00000004741PRDM510087.333ENSMODG00000018942PRDM59586.392Monodelphis_domestica
ENSSTOG00000004741PRDM510087.333ENSMALG00000013934prdm59087.333Monopterus_albus
ENSSTOG00000004741PRDM510094.737MGP_CAROLIEiJ_G0028463Prdm59893.354Mus_caroli
ENSSTOG00000004741PRDM59997.059ENSMUSG00000029913Prdm59593.038Mus_musculus
ENSSTOG00000004741PRDM59997.059MGP_PahariEiJ_G0022203Prdm59593.354Mus_pahari
ENSSTOG00000004741PRDM59997.059MGP_SPRETEiJ_G0029467Prdm59593.038Mus_spretus
ENSSTOG00000004741PRDM510093.671ENSMPUG00000017415PRDM59593.671Mustela_putorius_furo
ENSSTOG00000004741PRDM59386.562ENSMLUG00000006097PRDM510086.562Myotis_lucifugus
ENSSTOG00000004741PRDM510094.211ENSNGAG00000018317Prdm59394.010Nannospalax_galili
ENSSTOG00000004741PRDM59774.891ENSNBRG00000004976prdm59577.673Neolamprologus_brichardi
ENSSTOG00000004741PRDM510096.316ENSNLEG00000009107PRDM59594.620Nomascus_leucogenys
ENSSTOG00000004741PRDM59082.143ENSMEUG00000006576-6588.136Notamacropus_eugenii
ENSSTOG00000004741PRDM510092.395ENSOPRG00000011066-6196.429Ochotona_princeps
ENSSTOG00000004741PRDM510096.316ENSODEG00000009133PRDM59395.312Octodon_degus
ENSSTOG00000004741PRDM510087.333ENSONIG00000003111prdm59585.443Oreochromis_niloticus
ENSSTOG00000004741PRDM59790.909ENSOANG00000015109PRDM59187.437Ornithorhynchus_anatinus
ENSSTOG00000004741PRDM58183.333ENSOANG00000006197-10083.333Ornithorhynchus_anatinus
ENSSTOG00000004741PRDM59484.501ENSOCUG00000013454PRDM510083.544Oryctolagus_cuniculus
ENSSTOG00000004741PRDM510087.333ENSORLG00000016247prdm59585.127Oryzias_latipes
ENSSTOG00000004741PRDM510087.333ENSORLG00020018051prdm59585.127Oryzias_latipes_hni
ENSSTOG00000004741PRDM510087.333ENSORLG00015013760prdm59585.127Oryzias_latipes_hsok
ENSSTOG00000004741PRDM510087.333ENSOMEG00000005143prdm59585.443Oryzias_melastigma
ENSSTOG00000004741PRDM58995.333ENSOGAG00000009996PRDM59395.333Otolemur_garnettii
ENSSTOG00000004741PRDM59993.609ENSOARG00000015473PRDM510094.444Ovis_aries
ENSSTOG00000004741PRDM59995.833ENSPPAG00000043045PRDM510095.038Pan_paniscus
ENSSTOG00000004741PRDM510093.987ENSPPRG00000001020PRDM59593.987Panthera_pardus
ENSSTOG00000004741PRDM510093.987ENSPTIG00000010807PRDM59593.987Panthera_tigris_altaica
ENSSTOG00000004741PRDM510096.316ENSPTRG00000016403PRDM59594.620Pan_troglodytes
ENSSTOG00000004741PRDM510096.316ENSPANG00000023612PRDM59594.620Papio_anubis
ENSSTOG00000004741PRDM510085.593ENSPKIG00000015492prdm58985.593Paramormyrops_kingsleyae
ENSSTOG00000004741PRDM510088.000ENSPSIG00000013505PRDM59587.975Pelodiscus_sinensis
ENSSTOG00000004741PRDM510086.667ENSPMGG00000012622prdm59086.667Periophthalmus_magnuspinnatus
ENSSTOG00000004741PRDM57890.722ENSPMAG00000005248prdm510090.722Petromyzon_marinus
ENSSTOG00000004741PRDM59873.178ENSPFOG00000018630prdm59173.178Poecilia_formosa
ENSSTOG00000004741PRDM510087.333ENSPLAG00000014148prdm59585.443Poecilia_latipinna
ENSSTOG00000004741PRDM510087.333ENSPMEG00000018002prdm59585.443Poecilia_mexicana
ENSSTOG00000004741PRDM510087.333ENSPREG00000018366prdm59585.443Poecilia_reticulata
ENSSTOG00000004741PRDM510094.667ENSPPYG00000015031PRDM59594.620Pongo_abelii
ENSSTOG00000004741PRDM510093.333ENSPCAG00000011671PRDM59593.333Procavia_capensis
ENSSTOG00000004741PRDM510096.842ENSPCOG00000022828PRDM59395.833Propithecus_coquereli
ENSSTOG00000004741PRDM510091.772ENSPVAG00000012309PRDM510091.772Pteropus_vampyrus
ENSSTOG00000004741PRDM510087.333ENSPNYG00000012194prdm59585.443Pundamilia_nyererei
ENSSTOG00000004741PRDM59889.041ENSPNAG00000026181prdm59586.859Pygocentrus_nattereri
ENSSTOG00000004741PRDM59884.932ENSPNAG00000023191-9982.372Pygocentrus_nattereri
ENSSTOG00000004741PRDM59988.693ENSRNOG00000023679Prdm59488.693Rattus_norvegicus
ENSSTOG00000004741PRDM510096.316ENSRBIG00000041307PRDM59594.620Rhinopithecus_bieti
ENSSTOG00000004741PRDM510089.506ENSRROG00000035343PRDM59589.506Rhinopithecus_roxellana
ENSSTOG00000004741PRDM510095.789ENSSBOG00000022100PRDM59594.620Saimiri_boliviensis_boliviensis
ENSSTOG00000004741PRDM59891.803ENSSHAG00000003250PRDM59991.803Sarcophilus_harrisii
ENSSTOG00000004741PRDM510088.000ENSSFOG00015020478prdm59585.759Scleropages_formosus
ENSSTOG00000004741PRDM510087.333ENSSMAG00000018844prdm59585.759Scophthalmus_maximus
ENSSTOG00000004741PRDM59793.443ENSSDUG00000020397prdm59586.076Seriola_dumerili
ENSSTOG00000004741PRDM59992.784ENSSLDG00000013353prdm59586.076Seriola_lalandi_dorsalis
ENSSTOG00000004741PRDM510095.122ENSSARG00000014129-7092.308Sorex_araneus
ENSSTOG00000004741PRDM510090.000ENSSPUG00000009941PRDM59587.342Sphenodon_punctatus
ENSSTOG00000004741PRDM510087.333ENSSPAG00000013866prdm59585.759Stegastes_partitus
ENSSTOG00000004741PRDM510094.631ENSSSCG00000009101PRDM59594.304Sus_scrofa
ENSSTOG00000004741PRDM510088.000ENSTGUG00000001920PRDM510087.658Taeniopygia_guttata
ENSSTOG00000004741PRDM510087.333ENSTRUG00000013850prdm59585.443Takifugu_rubripes
ENSSTOG00000004741PRDM510072.848ENSTNIG00000005901prdm59562.982Tetraodon_nigroviridis
ENSSTOG00000004741PRDM596100.000ENSTBEG00000015386PRDM585100.000Tupaia_belangeri
ENSSTOG00000004741PRDM510093.671ENSTTRG00000010996PRDM59593.671Tursiops_truncatus
ENSSTOG00000004741PRDM59994.371ENSUAMG00000009994PRDM58492.735Ursus_americanus
ENSSTOG00000004741PRDM510095.312ENSUMAG00000003733PRDM59995.312Ursus_maritimus
ENSSTOG00000004741PRDM510078.667ENSVPAG00000007435PRDM59878.261Vicugna_pacos
ENSSTOG00000004741PRDM510094.000ENSVVUG00000013192PRDM510094.304Vulpes_vulpes
ENSSTOG00000004741PRDM510080.851ENSXETG00000002101prdm59580.380Xenopus_tropicalis
ENSSTOG00000004741PRDM510087.333ENSXCOG00000008567prdm59585.443Xiphophorus_couchianus
ENSSTOG00000004741PRDM59793.443ENSXMAG00000013825prdm59585.443Xiphophorus_maculatus

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