EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000005000 (Gene tree)
Gene ID: 101954604
Gene Symbol: BLM
Alias: BS|RECQ2|RECQL3
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 61814 bases
Position: chrJH393293.1:16194092-16255905
Accession: 101954604
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000004496	HRDC	PF00570.23	2.3e-12	1	1
ENSSTOP00000004496	BDHCT	PF08072.11	1.5e-20	1	1
ENSSTOP00000004496	DEAD	PF00270.29	2.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000005013	BLM-201	4415	XM_005320165	ENSSTOP00000004496	1414 (aa)	XP_005320222	I3M5A7

Gene Model

Click here to download ENSSTOG00000005000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000005000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000005000	BLM	100	82.841	ENSG00000197299	BLM	100	82.419	Homo_sapiens
ENSSTOG00000005000	BLM	64	64.885	ENSAPOG00000017966	blm	66	64.758	Acanthochromis_polyacanthus
ENSSTOG00000005000	BLM	100	78.331	ENSAMEG00000013843	BLM	100	77.630	Ailuropoda_melanoleuca
ENSSTOG00000005000	BLM	65	64.758	ENSACIG00000023762	blm	64	64.751	Amphilophus_citrinellus
ENSSTOG00000005000	BLM	64	65.057	ENSAOCG00000003318	blm	64	65.184	Amphiprion_ocellaris
ENSSTOG00000005000	BLM	64	65.057	ENSAPEG00000018105	blm	63	65.184	Amphiprion_percula
ENSSTOG00000005000	BLM	84	66.245	ENSATEG00000006421	blm	66	66.035	Anabas_testudineus
ENSSTOG00000005000	BLM	82	57.553	ENSAPLG00000006878	BLM	84	68.602	Anas_platyrhynchos
ENSSTOG00000005000	BLM	56	69.835	ENSACAG00000014275	BLM	55	69.835	Anolis_carolinensis
ENSSTOG00000005000	BLM	100	82.278	ENSANAG00000038415	BLM	100	81.716	Aotus_nancymaae
ENSSTOG00000005000	BLM	89	61.939	ENSACLG00000020354	blm	66	61.939	Astatotilapia_calliptera
ENSSTOG00000005000	BLM	85	65.434	ENSAMXG00000016970	blm	63	61.636	Astyanax_mexicanus
ENSSTOG00000005000	BLM	93	79.934	ENSBTAG00000020301	BLM	100	79.934	Bos_taurus
ENSSTOG00000005000	BLM	100	81.927	ENSCJAG00000009803	BLM	100	81.435	Callithrix_jacchus
ENSSTOG00000005000	BLM	100	79.958	ENSCAFG00000012385	BLM	100	79.958	Canis_familiaris
ENSSTOG00000005000	BLM	100	79.887	ENSCAFG00020016111	BLM	94	90.685	Canis_lupus_dingo
ENSSTOG00000005000	BLM	100	78.848	ENSCHIG00000010329	BLM	100	78.496	Capra_hircus
ENSSTOG00000005000	BLM	100	81.224	ENSTSYG00000012368	BLM	100	80.731	Carlito_syrichta
ENSSTOG00000005000	BLM	88	84.029	ENSCAPG00000017976	BLM	99	84.029	Cavia_aperea
ENSSTOG00000005000	BLM	100	77.934	ENSCPOG00000001761	BLM	100	77.372	Cavia_porcellus
ENSSTOG00000005000	BLM	100	81.013	ENSCCAG00000023069	BLM	100	80.868	Cebus_capucinus
ENSSTOG00000005000	BLM	100	82.841	ENSCATG00000040609	BLM	92	92.992	Cercocebus_atys
ENSSTOG00000005000	BLM	100	80.239	ENSCLAG00000012111	BLM	100	79.677	Chinchilla_lanigera
ENSSTOG00000005000	BLM	100	82.168	ENSCSAG00000017040	BLM	100	81.748	Chlorocebus_sabaeus
ENSSTOG00000005000	BLM	91	76.842	ENSCHOG00000006255	BLM	93	76.842	Choloepus_hoffmanni
ENSSTOG00000005000	BLM	89	54.787	ENSCPBG00000025000	BLM	98	59.002	Chrysemys_picta_bellii
ENSSTOG00000005000	BLM	88	72.510	ENSCANG00000034808	BLM	100	90.556	Colobus_angolensis_palliatus
ENSSTOG00000005000	BLM	100	78.792	ENSCGRG00001024897	Blm	100	78.129	Cricetulus_griseus_chok1gshd
ENSSTOG00000005000	BLM	67	74.298	ENSCGRG00000016261	Blm	97	73.097	Cricetulus_griseus_crigri
ENSSTOG00000005000	BLM	55	64.923	ENSCSEG00000013483	blm	59	64.937	Cynoglossus_semilaevis
ENSSTOG00000005000	BLM	84	64.810	ENSDARG00000077089	blm	63	65.443	Danio_rerio
ENSSTOG00000005000	BLM	99	77.918	ENSDNOG00000010159	BLM	99	77.428	Dasypus_novemcinctus
ENSSTOG00000005000	BLM	73	79.617	ENSDORG00000011033	Blm	100	79.522	Dipodomys_ordii
ENSSTOG00000005000	BLM	86	64.354	ENSETEG00000015019	BLM	86	64.354	Echinops_telfairi
ENSSTOG00000005000	BLM	100	79.255	ENSEASG00005006727	BLM	100	79.114	Equus_asinus_asinus
ENSSTOG00000005000	BLM	100	81.254	ENSECAG00000011405	BLM	100	80.976	Equus_caballus
ENSSTOG00000005000	BLM	98	73.722	ENSEEUG00000001434	BLM	99	72.082	Erinaceus_europaeus
ENSSTOG00000005000	BLM	86	69.764	ENSELUG00000019098	blm	50	69.764	Esox_lucius
ENSSTOG00000005000	BLM	100	77.739	ENSFCAG00000006087	BLM	100	77.844	Felis_catus
ENSSTOG00000005000	BLM	100	72.657	ENSFDAG00000012658	BLM	100	71.888	Fukomys_damarensis
ENSSTOG00000005000	BLM	64	64.803	ENSFHEG00000002553	blm	63	65.146	Fundulus_heteroclitus
ENSSTOG00000005000	BLM	84	62.580	ENSGMOG00000016431	blm	89	60.710	Gadus_morhua
ENSSTOG00000005000	BLM	99	49.529	ENSGALG00000008256	BLM	86	68.296	Gallus_gallus
ENSSTOG00000005000	BLM	55	65.128	ENSGAFG00000001117	blm	59	65.306	Gambusia_affinis
ENSSTOG00000005000	BLM	63	64.496	ENSGACG00000010863	blm	100	73.157	Gasterosteus_aculeatus
ENSSTOG00000005000	BLM	55	76.726	ENSGAGG00000005383	BLM	80	76.726	Gopherus_agassizii
ENSSTOG00000005000	BLM	100	82.489	ENSGGOG00000007710	BLM	92	93.261	Gorilla_gorilla
ENSSTOG00000005000	BLM	89	62.175	ENSHBUG00000015943	blm	65	62.057	Haplochromis_burtoni
ENSSTOG00000005000	BLM	100	80.745	ENSHGLG00000013231	BLM	99	80.183	Heterocephalus_glaber_female
ENSSTOG00000005000	BLM	61	60.641	ENSHCOG00000011455	blm	83	61.420	Hippocampus_comes
ENSSTOG00000005000	BLM	73	53.920	ENSIPUG00000000529	blm	68	64.586	Ictalurus_punctatus
ENSSTOG00000005000	BLM	65	85.918	ENSJJAG00000016322	Blm	94	85.759	Jaculus_jaculus
ENSSTOG00000005000	BLM	69	61.724	ENSKMAG00000016608	blm	60	65.693	Kryptolebias_marmoratus
ENSSTOG00000005000	BLM	59	66.783	ENSLACG00000006490	BLM	58	66.941	Latimeria_chalumnae
ENSSTOG00000005000	BLM	84	51.830	ENSLOCG00000014302	blm	80	55.814	Lepisosteus_oculatus
ENSSTOG00000005000	BLM	100	82.560	ENSMFAG00000042982	BLM	92	92.992	Macaca_fascicularis
ENSSTOG00000005000	BLM	100	82.630	ENSMMUG00000019526	BLM	92	92.992	Macaca_mulatta
ENSSTOG00000005000	BLM	98	80.014	ENSMNEG00000031251	BLM	92	92.722	Macaca_nemestrina
ENSSTOG00000005000	BLM	100	80.591	ENSMLEG00000032934	BLM	100	80.169	Mandrillus_leucophaeus
ENSSTOG00000005000	BLM	70	62.053	ENSMAMG00000008726	blm	68	62.950	Mastacembelus_armatus
ENSSTOG00000005000	BLM	89	62.040	ENSMZEG00005022323	blm	59	62.069	Maylandia_zebra
ENSSTOG00000005000	BLM	100	78.401	ENSMAUG00000008953	Blm	99	77.949	Mesocricetus_auratus
ENSSTOG00000005000	BLM	100	82.233	ENSMICG00000034442	BLM	100	81.812	Microcebus_murinus
ENSSTOG00000005000	BLM	100	77.107	ENSMOCG00000016367	Blm	99	76.653	Microtus_ochrogaster
ENSSTOG00000005000	BLM	70	61.988	ENSMMOG00000006959	blm	69	61.692	Mola_mola
ENSSTOG00000005000	BLM	99	63.513	ENSMODG00000019449	BLM	99	63.420	Monodelphis_domestica
ENSSTOG00000005000	BLM	67	65.912	ENSMALG00000007323	blm	67	65.660	Monopterus_albus
ENSSTOG00000005000	BLM	100	76.227	MGP_CAROLIEiJ_G0029907	Blm	100	75.843	Mus_caroli
ENSSTOG00000005000	BLM	100	76.204	ENSMUSG00000030528	Blm	100	75.751	Mus_musculus
ENSSTOG00000005000	BLM	100	77.171	MGP_PahariEiJ_G0013129	Blm	100	76.756	Mus_pahari
ENSSTOG00000005000	BLM	100	76.557	MGP_SPRETEiJ_G0031009	Blm	100	76.244	Mus_spretus
ENSSTOG00000005000	BLM	84	77.704	ENSMPUG00000015657	BLM	99	76.961	Mustela_putorius_furo
ENSSTOG00000005000	BLM	100	77.317	ENSMLUG00000014697	BLM	100	77.317	Myotis_lucifugus
ENSSTOG00000005000	BLM	100	80.098	ENSNGAG00000001275	Blm	100	79.155	Nannospalax_galili
ENSSTOG00000005000	BLM	84	65.390	ENSNBRG00000019702	blm	56	65.429	Neolamprologus_brichardi
ENSSTOG00000005000	BLM	100	80.802	ENSNLEG00000012087	BLM	100	82.759	Nomascus_leucogenys
ENSSTOG00000005000	BLM	99	61.003	ENSMEUG00000007253	BLM	99	60.851	Notamacropus_eugenii
ENSSTOG00000005000	BLM	95	85.892	ENSOPRG00000011667	BLM	95	85.615	Ochotona_princeps
ENSSTOG00000005000	BLM	73	77.447	ENSODEG00000015373	BLM	100	77.447	Octodon_degus
ENSSTOG00000005000	BLM	88	62.324	ENSONIG00000015193	blm	66	62.293	Oreochromis_niloticus
ENSSTOG00000005000	BLM	54	81.865	ENSOANG00000009316	-	99	82.185	Ornithorhynchus_anatinus
ENSSTOG00000005000	BLM	99	73.806	ENSOCUG00000013969	BLM	99	73.666	Oryctolagus_cuniculus
ENSSTOG00000005000	BLM	65	65.689	ENSORLG00000008110	blm	63	65.732	Oryzias_latipes
ENSSTOG00000005000	BLM	65	65.813	ENSORLG00020004812	blm	64	65.776	Oryzias_latipes_hni
ENSSTOG00000005000	BLM	65	66.069	ENSORLG00015018640	blm	78	65.944	Oryzias_latipes_hsok
ENSSTOG00000005000	BLM	55	64.758	ENSOMEG00000023545	blm	57	65.051	Oryzias_melastigma
ENSSTOG00000005000	BLM	100	75.772	ENSOGAG00000005708	BLM	100	75.351	Otolemur_garnettii
ENSSTOG00000005000	BLM	100	78.064	ENSOARG00000012875	BLM	100	77.716	Ovis_aries
ENSSTOG00000005000	BLM	100	82.700	ENSPPAG00000032173	BLM	100	82.349	Pan_paniscus
ENSSTOG00000005000	BLM	100	77.949	ENSPPRG00000002471	BLM	100	77.598	Panthera_pardus
ENSSTOG00000005000	BLM	100	77.560	ENSPTIG00000016168	BLM	100	77.209	Panthera_tigris_altaica
ENSSTOG00000005000	BLM	100	82.489	ENSPTRG00000007460	BLM	100	82.138	Pan_troglodytes
ENSSTOG00000005000	BLM	100	82.911	ENSPANG00000018572	BLM	92	93.261	Papio_anubis
ENSSTOG00000005000	BLM	88	62.471	ENSPKIG00000008954	blm	59	62.911	Paramormyrops_kingsleyae
ENSSTOG00000005000	BLM	51	67.452	ENSPMGG00000006629	blm	79	67.452	Periophthalmus_magnuspinnatus
ENSSTOG00000005000	BLM	100	77.107	ENSPEMG00000017348	Blm	100	76.723	Peromyscus_maniculatus_bairdii
ENSSTOG00000005000	BLM	50	57.563	ENSPMAG00000000445	blm	96	57.703	Petromyzon_marinus
ENSSTOG00000005000	BLM	99	62.900	ENSPCIG00000006609	BLM	99	62.832	Phascolarctos_cinereus
ENSSTOG00000005000	BLM	61	60.162	ENSPFOG00000005059	blm	75	54.229	Poecilia_formosa
ENSSTOG00000005000	BLM	61	60.162	ENSPLAG00000017344	blm	75	54.011	Poecilia_latipinna
ENSSTOG00000005000	BLM	61	60.162	ENSPMEG00000000321	blm	75	54.135	Poecilia_mexicana
ENSSTOG00000005000	BLM	55	64.487	ENSPREG00000007715	blm	56	64.450	Poecilia_reticulata
ENSSTOG00000005000	BLM	100	80.829	ENSPPYG00000006784	BLM	100	80.407	Pongo_abelii
ENSSTOG00000005000	BLM	73	87.879	ENSPCAG00000008960	BLM	73	87.879	Procavia_capensis
ENSSTOG00000005000	BLM	100	77.458	ENSPCOG00000000439	BLM	100	80.838	Propithecus_coquereli
ENSSTOG00000005000	BLM	80	95.177	ENSPVAG00000011642	BLM	83	95.177	Pteropus_vampyrus
ENSSTOG00000005000	BLM	89	50.531	ENSPNYG00000010956	blm	64	50.535	Pundamilia_nyererei
ENSSTOG00000005000	BLM	59	64.320	ENSPNAG00000011714	blm	59	62.804	Pygocentrus_nattereri
ENSSTOG00000005000	BLM	100	74.930	ENSRNOG00000011213	Blm	100	74.613	Rattus_norvegicus
ENSSTOG00000005000	BLM	100	80.380	ENSRBIG00000029656	BLM	100	85.893	Rhinopithecus_bieti
ENSSTOG00000005000	BLM	100	81.857	ENSRROG00000037871	BLM	92	91.105	Rhinopithecus_roxellana
ENSSTOG00000005000	BLM	91	81.665	ENSSBOG00000030957	BLM	100	81.665	Saimiri_boliviensis_boliviensis
ENSSTOG00000005000	BLM	99	62.881	ENSSHAG00000007988	BLM	99	62.742	Sarcophilus_harrisii
ENSSTOG00000005000	BLM	58	60.819	ENSSFOG00015015462	blm	67	60.631	Scleropages_formosus
ENSSTOG00000005000	BLM	67	64.841	ENSSMAG00000001120	blm	67	65.565	Scophthalmus_maximus
ENSSTOG00000005000	BLM	65	65.779	ENSSDUG00000010955	blm	63	65.693	Seriola_dumerili
ENSSTOG00000005000	BLM	89	62.411	ENSSLDG00000000634	blm	66	62.175	Seriola_lalandi_dorsalis
ENSSTOG00000005000	BLM	90	73.747	ENSSARG00000006398	BLM	95	73.747	Sorex_araneus
ENSSTOG00000005000	BLM	81	55.900	ENSSPUG00000000013	BLM	95	56.278	Sphenodon_punctatus
ENSSTOG00000005000	BLM	85	65.863	ENSSPAG00000013999	blm	85	65.732	Stegastes_partitus
ENSSTOG00000005000	BLM	100	78.955	ENSSSCG00000001816	BLM	99	79.448	Sus_scrofa
ENSSTOG00000005000	BLM	79	52.230	ENSTGUG00000009959	-	99	51.983	Taeniopygia_guttata
ENSSTOG00000005000	BLM	79	50.086	ENSTRUG00000019860	blm	63	63.359	Takifugu_rubripes
ENSSTOG00000005000	BLM	91	51.266	ENSTNIG00000019246	blm	58	63.878	Tetraodon_nigroviridis
ENSSTOG00000005000	BLM	79	83.932	ENSTBEG00000006706	BLM	81	83.932	Tupaia_belangeri
ENSSTOG00000005000	BLM	100	79.916	ENSTTRG00000016386	BLM	100	80.126	Tursiops_truncatus
ENSSTOG00000005000	BLM	100	78.581	ENSUMAG00000009105	BLM	96	91.084	Ursus_maritimus
ENSSTOG00000005000	BLM	99	78.074	ENSVPAG00000000085	BLM	99	78.004	Vicugna_pacos
ENSSTOG00000005000	BLM	96	89.560	ENSVVUG00000006402	BLM	100	89.560	Vulpes_vulpes
ENSSTOG00000005000	BLM	99	50.571	ENSXETG00000007847	blm	54	72.692	Xenopus_tropicalis
ENSSTOG00000005000	BLM	55	61.509	ENSXCOG00000020227	blm	54	61.607	Xiphophorus_couchianus
ENSSTOG00000005000	BLM	55	65.128	ENSXMAG00000002951	blm	56	64.834	Xiphophorus_maculatus