EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000005490 (Gene tree)
Gene ID: 101964150
Gene Symbol: CNOT1
Alias: AD-005|CDC39|KIAA1007|NOT1|NOT1H
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 82871 bases
Position: chrJH393285.1:10302087-10384957
Accession: 101964150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000028044	Not1	PF04054.15	8.8e-153	1	1
ENSSTOP00000032262	Not1	PF04054.15	8.8e-153	1	1
ENSSTOP00000004987	Not1	PF04054.15	1.2e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000043279	CNOT1-201	7933	XM_013365877	ENSSTOP00000032262	2376 (aa)	XP_013221331	A0A287DFH4
ENSSTOT00000034571	CNOT1-202	7477	XM_005318252	ENSSTOP00000028044	2376 (aa)	XP_005318309	A0A287DFH4
ENSSTOT00000005573	CNOT1-203	6981	-	ENSSTOP00000004987	2326 (aa)	-	I3M6B4

Gene Model

Click here to download ENSSTOG00000005490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000005490's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000005490	CNOT1	100	99.579	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSSTOG00000005490	CNOT1	97	97.055	ENSAPOG00000005042	cnot1	100	97.055	Acanthochromis_polyacanthus
ENSSTOG00000005490	CNOT1	100	99.411	ENSAMEG00000017298	CNOT1	100	99.411	Ailuropoda_melanoleuca
ENSSTOG00000005490	CNOT1	90	89.888	ENSACIG00000016003	cnot1	100	90.168	Amphilophus_citrinellus
ENSSTOG00000005490	CNOT1	100	90.281	ENSAPEG00000022342	cnot1	100	90.197	Amphiprion_percula
ENSSTOG00000005490	CNOT1	97	97.195	ENSATEG00000012892	cnot1	100	97.195	Anabas_testudineus
ENSSTOG00000005490	CNOT1	100	97.689	ENSAPLG00000007162	CNOT1	100	97.689	Anas_platyrhynchos
ENSSTOG00000005490	CNOT1	92	95.826	ENSACAG00000001602	CNOT1	98	96.058	Anolis_carolinensis
ENSSTOG00000005490	CNOT1	100	98.194	ENSANAG00000038198	CNOT1	100	98.194	Aotus_nancymaae
ENSSTOG00000005490	CNOT1	97	97.195	ENSACLG00000014234	cnot1	100	97.195	Astatotilapia_calliptera
ENSSTOG00000005490	CNOT1	100	90.955	ENSAMXG00000013170	cnot1	100	91.334	Astyanax_mexicanus
ENSSTOG00000005490	CNOT1	100	99.663	ENSBTAG00000020782	CNOT1	100	99.663	Bos_taurus
ENSSTOG00000005490	CNOT1	81	40.442	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSSTOG00000005490	CNOT1	100	99.537	ENSCJAG00000011318	CNOT1	100	99.537	Callithrix_jacchus
ENSSTOG00000005490	CNOT1	100	99.328	ENSCAFG00000008426	CNOT1	100	99.328	Canis_familiaris
ENSSTOG00000005490	CNOT1	100	99.613	ENSCAFG00020010156	CNOT1	100	99.613	Canis_lupus_dingo
ENSSTOG00000005490	CNOT1	100	99.663	ENSCHIG00000010452	CNOT1	100	99.663	Capra_hircus
ENSSTOG00000005490	CNOT1	100	99.705	ENSTSYG00000006888	CNOT1	100	99.705	Carlito_syrichta
ENSSTOG00000005490	CNOT1	100	95.118	ENSCPOG00000013026	CNOT1	100	95.118	Cavia_porcellus
ENSSTOG00000005490	CNOT1	100	97.980	ENSCCAG00000026333	CNOT1	100	97.980	Cebus_capucinus
ENSSTOG00000005490	CNOT1	100	99.621	ENSCATG00000032625	CNOT1	100	99.621	Cercocebus_atys
ENSSTOG00000005490	CNOT1	100	99.832	ENSCLAG00000006289	CNOT1	100	99.832	Chinchilla_lanigera
ENSSTOG00000005490	CNOT1	100	99.621	ENSCSAG00000004731	CNOT1	100	99.621	Chlorocebus_sabaeus
ENSSTOG00000005490	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSSTOG00000005490	CNOT1	98	95.749	ENSCPBG00000026222	CNOT1	99	98.472	Chrysemys_picta_bellii
ENSSTOG00000005490	CNOT1	100	59.078	ENSCING00000009149	-	100	58.865	Ciona_intestinalis
ENSSTOG00000005490	CNOT1	89	63.114	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSSTOG00000005490	CNOT1	100	97.731	ENSCANG00000040534	CNOT1	100	97.731	Colobus_angolensis_palliatus
ENSSTOG00000005490	CNOT1	100	99.411	ENSCGRG00001016365	Cnot1	100	99.411	Cricetulus_griseus_chok1gshd
ENSSTOG00000005490	CNOT1	100	99.411	ENSCGRG00000001714	Cnot1	100	99.411	Cricetulus_griseus_crigri
ENSSTOG00000005490	CNOT1	97	96.494	ENSCVAG00000018930	cnot1	100	96.494	Cyprinodon_variegatus
ENSSTOG00000005490	CNOT1	100	90.063	ENSDARG00000004174	cnot1	100	89.979	Danio_rerio
ENSSTOG00000005490	CNOT1	100	97.097	ENSDNOG00000013250	CNOT1	100	97.097	Dasypus_novemcinctus
ENSSTOG00000005490	CNOT1	99	46.269	FBgn0085436	Not1	99	48.230	Drosophila_melanogaster
ENSSTOG00000005490	CNOT1	84	97.440	ENSETEG00000012806	CNOT1	84	97.440	Echinops_telfairi
ENSSTOG00000005490	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSSTOG00000005490	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSSTOG00000005490	CNOT1	100	99.705	ENSECAG00000009889	CNOT1	100	99.705	Equus_caballus
ENSSTOG00000005490	CNOT1	90	99.295	ENSEEUG00000006015	CNOT1	90	99.295	Erinaceus_europaeus
ENSSTOG00000005490	CNOT1	100	89.607	ENSELUG00000014085	cnot1	100	89.661	Esox_lucius
ENSSTOG00000005490	CNOT1	100	99.413	ENSFCAG00000025155	CNOT1	100	99.413	Felis_catus
ENSSTOG00000005490	CNOT1	100	97.727	ENSFALG00000007285	CNOT1	100	97.727	Ficedula_albicollis
ENSSTOG00000005490	CNOT1	100	99.747	ENSFDAG00000013399	CNOT1	100	99.747	Fukomys_damarensis
ENSSTOG00000005490	CNOT1	100	90.222	ENSFHEG00000020574	cnot1	100	90.264	Fundulus_heteroclitus
ENSSTOG00000005490	CNOT1	92	89.518	ENSGMOG00000012864	cnot1	100	89.842	Gadus_morhua
ENSSTOG00000005490	CNOT1	100	97.769	ENSGALG00000002301	CNOT1	100	97.769	Gallus_gallus
ENSSTOG00000005490	CNOT1	100	89.136	ENSGAFG00000015005	cnot1	100	89.136	Gambusia_affinis
ENSSTOG00000005490	CNOT1	92	90.311	ENSGACG00000002606	cnot1	100	95.874	Gasterosteus_aculeatus
ENSSTOG00000005490	CNOT1	100	97.728	ENSGAGG00000022646	CNOT1	100	97.728	Gopherus_agassizii
ENSSTOG00000005490	CNOT1	100	99.537	ENSGGOG00000009547	CNOT1	100	99.537	Gorilla_gorilla
ENSSTOG00000005490	CNOT1	97	97.195	ENSHBUG00000001729	cnot1	100	97.195	Haplochromis_burtoni
ENSSTOG00000005490	CNOT1	100	99.663	ENSHGLG00000014322	CNOT1	100	99.663	Heterocephalus_glaber_female
ENSSTOG00000005490	CNOT1	100	89.298	ENSHCOG00000006501	cnot1	100	89.395	Hippocampus_comes
ENSSTOG00000005490	CNOT1	100	89.173	ENSIPUG00000011915	cnot1	100	89.215	Ictalurus_punctatus
ENSSTOG00000005490	CNOT1	100	99.097	ENSJJAG00000000633	Cnot1	100	99.097	Jaculus_jaculus
ENSSTOG00000005490	CNOT1	100	89.942	ENSKMAG00000006149	cnot1	100	90.050	Kryptolebias_marmoratus
ENSSTOG00000005490	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSSTOG00000005490	CNOT1	100	94.992	ENSLACG00000010869	CNOT1	100	94.992	Latimeria_chalumnae
ENSSTOG00000005490	CNOT1	100	92.869	ENSLOCG00000006324	cnot1	100	92.869	Lepisosteus_oculatus
ENSSTOG00000005490	CNOT1	100	99.453	ENSLAFG00000000098	CNOT1	100	99.453	Loxodonta_africana
ENSSTOG00000005490	CNOT1	100	99.613	ENSMFAG00000035888	CNOT1	100	99.613	Macaca_fascicularis
ENSSTOG00000005490	CNOT1	100	99.579	ENSMMUG00000014625	CNOT1	100	99.579	Macaca_mulatta
ENSSTOG00000005490	CNOT1	100	97.034	ENSMNEG00000031820	CNOT1	100	99.626	Macaca_nemestrina
ENSSTOG00000005490	CNOT1	100	98.409	ENSMLEG00000040933	CNOT1	100	98.409	Mandrillus_leucophaeus
ENSSTOG00000005490	CNOT1	100	89.131	ENSMAMG00000016524	cnot1	100	89.211	Mastacembelus_armatus
ENSSTOG00000005490	CNOT1	97	97.195	ENSMZEG00005016210	cnot1	100	97.195	Maylandia_zebra
ENSSTOG00000005490	CNOT1	100	97.517	ENSMGAG00000001908	CNOT1	100	97.517	Meleagris_gallopavo
ENSSTOG00000005490	CNOT1	100	99.495	ENSMICG00000007071	CNOT1	100	99.495	Microcebus_murinus
ENSSTOG00000005490	CNOT1	100	99.453	ENSMOCG00000017969	Cnot1	100	99.453	Microtus_ochrogaster
ENSSTOG00000005490	CNOT1	97	93.829	ENSMMOG00000019134	cnot1	100	93.829	Mola_mola
ENSSTOG00000005490	CNOT1	100	97.897	ENSMODG00000014199	CNOT1	100	97.897	Monodelphis_domestica
ENSSTOG00000005490	CNOT1	100	90.172	ENSMALG00000008645	cnot1	100	90.130	Monopterus_albus
ENSSTOG00000005490	CNOT1	95	99.777	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.777	Mus_caroli
ENSSTOG00000005490	CNOT1	100	99.495	ENSMUSG00000036550	Cnot1	100	99.495	Mus_musculus
ENSSTOG00000005490	CNOT1	100	99.453	MGP_PahariEiJ_G0023028	Cnot1	100	99.453	Mus_pahari
ENSSTOG00000005490	CNOT1	100	99.495	MGP_SPRETEiJ_G0032549	Cnot1	100	99.495	Mus_spretus
ENSSTOG00000005490	CNOT1	100	99.705	ENSMPUG00000004830	CNOT1	100	99.705	Mustela_putorius_furo
ENSSTOG00000005490	CNOT1	100	99.032	ENSMLUG00000003728	CNOT1	100	99.032	Myotis_lucifugus
ENSSTOG00000005490	CNOT1	100	99.705	ENSNGAG00000018628	Cnot1	100	99.705	Nannospalax_galili
ENSSTOG00000005490	CNOT1	94	97.195	ENSNBRG00000019358	cnot1	100	97.195	Neolamprologus_brichardi
ENSSTOG00000005490	CNOT1	100	99.527	ENSNLEG00000003566	CNOT1	100	99.527	Nomascus_leucogenys
ENSSTOG00000005490	CNOT1	86	98.434	ENSMEUG00000006145	CNOT1	87	98.434	Notamacropus_eugenii
ENSSTOG00000005490	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSSTOG00000005490	CNOT1	100	99.705	ENSODEG00000016337	CNOT1	100	99.705	Octodon_degus
ENSSTOG00000005490	CNOT1	100	90.180	ENSONIG00000007358	cnot1	100	90.088	Oreochromis_niloticus
ENSSTOG00000005490	CNOT1	92	98.136	ENSOANG00000012109	CNOT1	100	98.166	Ornithorhynchus_anatinus
ENSSTOG00000005490	CNOT1	100	99.621	ENSOCUG00000006911	CNOT1	100	99.621	Oryctolagus_cuniculus
ENSSTOG00000005490	CNOT1	100	90.231	ENSORLG00000013734	cnot1	100	90.268	Oryzias_latipes
ENSSTOG00000005490	CNOT1	100	90.691	ENSORLG00020017012	cnot1	100	90.360	Oryzias_latipes_hni
ENSSTOG00000005490	CNOT1	100	90.605	ENSORLG00015007091	cnot1	100	90.231	Oryzias_latipes_hsok
ENSSTOG00000005490	CNOT1	100	89.927	ENSOMEG00000015124	cnot1	100	90.094	Oryzias_melastigma
ENSSTOG00000005490	CNOT1	100	99.537	ENSOGAG00000000543	CNOT1	100	99.537	Otolemur_garnettii
ENSSTOG00000005490	CNOT1	100	99.663	ENSOARG00000001567	CNOT1	100	99.663	Ovis_aries
ENSSTOG00000005490	CNOT1	100	99.579	ENSPPAG00000022013	CNOT1	100	99.579	Pan_paniscus
ENSSTOG00000005490	CNOT1	100	99.705	ENSPPRG00000004867	CNOT1	100	99.705	Panthera_pardus
ENSSTOG00000005490	CNOT1	100	99.705	ENSPTIG00000012589	CNOT1	100	99.705	Panthera_tigris_altaica
ENSSTOG00000005490	CNOT1	100	99.570	ENSPTRG00000008183	CNOT1	100	99.570	Pan_troglodytes
ENSSTOG00000005490	CNOT1	100	96.144	ENSPANG00000020901	CNOT1	100	96.144	Papio_anubis
ENSSTOG00000005490	CNOT1	97	93.399	ENSPKIG00000002914	CNOT1	99	93.399	Paramormyrops_kingsleyae
ENSSTOG00000005490	CNOT1	100	92.069	ENSPKIG00000023538	CNOT1	100	92.237	Paramormyrops_kingsleyae
ENSSTOG00000005490	CNOT1	100	97.601	ENSPSIG00000005499	CNOT1	100	97.601	Pelodiscus_sinensis
ENSSTOG00000005490	CNOT1	100	81.208	ENSPMAG00000009381	cnot1	100	81.066	Petromyzon_marinus
ENSSTOG00000005490	CNOT1	100	97.809	ENSPCIG00000007343	CNOT1	100	98.472	Phascolarctos_cinereus
ENSSTOG00000005490	CNOT1	99	89.780	ENSPFOG00000003497	cnot1	100	89.818	Poecilia_formosa
ENSSTOG00000005490	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSSTOG00000005490	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSSTOG00000005490	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSSTOG00000005490	CNOT1	100	99.537	ENSPPYG00000007410	CNOT1	100	99.537	Pongo_abelii
ENSSTOG00000005490	CNOT1	90	97.445	ENSPCAG00000003241	CNOT1	90	97.445	Procavia_capensis
ENSSTOG00000005490	CNOT1	100	99.527	ENSPCOG00000027139	CNOT1	100	99.527	Propithecus_coquereli
ENSSTOG00000005490	CNOT1	100	97.054	ENSPVAG00000004243	CNOT1	100	97.054	Pteropus_vampyrus
ENSSTOG00000005490	CNOT1	97	97.195	ENSPNYG00000012919	cnot1	100	97.195	Pundamilia_nyererei
ENSSTOG00000005490	CNOT1	100	90.194	ENSPNAG00000000246	cnot1	100	90.194	Pygocentrus_nattereri
ENSSTOG00000005490	CNOT1	100	99.411	ENSRNOG00000012271	Cnot1	100	99.411	Rattus_norvegicus
ENSSTOG00000005490	CNOT1	100	97.506	ENSRBIG00000044598	CNOT1	100	97.506	Rhinopithecus_bieti
ENSSTOG00000005490	CNOT1	100	99.621	ENSRROG00000000906	CNOT1	100	99.621	Rhinopithecus_roxellana
ENSSTOG00000005490	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSSTOG00000005490	CNOT1	100	95.326	ENSSBOG00000029155	CNOT1	100	95.326	Saimiri_boliviensis_boliviensis
ENSSTOG00000005490	CNOT1	100	98.066	ENSSHAG00000012187	CNOT1	100	98.066	Sarcophilus_harrisii
ENSSTOG00000005490	CNOT1	100	92.548	ENSSFOG00015017614	cnot1	100	92.288	Scleropages_formosus
ENSSTOG00000005490	CNOT1	97	97.195	ENSSMAG00000013844	cnot1	100	97.195	Scophthalmus_maximus
ENSSTOG00000005490	CNOT1	97	97.055	ENSSDUG00000021491	cnot1	100	97.055	Seriola_dumerili
ENSSTOG00000005490	CNOT1	97	97.055	ENSSLDG00000014816	cnot1	100	97.055	Seriola_lalandi_dorsalis
ENSSTOG00000005490	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSSTOG00000005490	CNOT1	100	90.516	ENSSPAG00000018802	cnot1	100	90.117	Stegastes_partitus
ENSSTOG00000005490	CNOT1	100	99.537	ENSSSCG00000002799	CNOT1	100	99.537	Sus_scrofa
ENSSTOG00000005490	CNOT1	100	97.604	ENSTGUG00000005919	CNOT1	100	97.604	Taeniopygia_guttata
ENSSTOG00000005490	CNOT1	100	88.861	ENSTNIG00000018706	cnot1	100	88.708	Tetraodon_nigroviridis
ENSSTOG00000005490	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSSTOG00000005490	CNOT1	95	99.359	ENSTTRG00000008460	CNOT1	95	99.359	Tursiops_truncatus
ENSSTOG00000005490	CNOT1	100	99.705	ENSUAMG00000009251	CNOT1	100	99.705	Ursus_americanus
ENSSTOG00000005490	CNOT1	100	99.705	ENSUMAG00000021291	CNOT1	100	99.705	Ursus_maritimus
ENSSTOG00000005490	CNOT1	97	97.172	ENSVPAG00000008846	CNOT1	97	97.172	Vicugna_pacos
ENSSTOG00000005490	CNOT1	100	98.574	ENSVVUG00000024037	CNOT1	100	99.259	Vulpes_vulpes
ENSSTOG00000005490	CNOT1	100	90.344	ENSXETG00000015900	cnot1	100	90.344	Xenopus_tropicalis
ENSSTOG00000005490	CNOT1	100	89.295	ENSXCOG00000013552	cnot1	100	89.295	Xiphophorus_couchianus
ENSSTOG00000005490	CNOT1	100	89.337	ENSXMAG00000006031	cnot1	100	89.337	Xiphophorus_maculatus