EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000005577 (Gene tree)
Gene ID: 101964200
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 8292 bases
Position: chrJH393373.1:1006517-1014808
Accession: 101964200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000004985	Gar1	PF04410.14	1.1e-38	1	1
ENSSTOP00000031686	Gar1	PF04410.14	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000005571	GAR1-201	1231	XM_005330093	ENSSTOP00000004985	215 (aa)	XP_005330150	I3M6B3
ENSSTOT00000039686	GAR1-202	234	-	ENSSTOP00000031686	77 (aa)	-	A0A287DDV0

Gene Model

Click here to download ENSSTOG00000005577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000005577's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000005577	GAR1	71	96.364	ENSG00000109534	GAR1	50	97.248	Homo_sapiens
ENSSTOG00000005577	GAR1	71	96.364	ENSAPOG00000019754	gar1	51	91.743	Acanthochromis_polyacanthus
ENSSTOG00000005577	GAR1	71	96.364	ENSAMEG00000004605	GAR1	53	95.413	Ailuropoda_melanoleuca
ENSSTOG00000005577	GAR1	71	96.364	ENSAOCG00000020947	gar1	61	90.076	Amphiprion_ocellaris
ENSSTOG00000005577	GAR1	71	96.364	ENSAPEG00000001676	gar1	61	90.076	Amphiprion_percula
ENSSTOG00000005577	GAR1	71	96.364	ENSATEG00000003733	gar1	51	91.743	Anabas_testudineus
ENSSTOG00000005577	GAR1	78	91.667	ENSAPLG00000010926	GAR1	59	88.679	Anas_platyrhynchos
ENSSTOG00000005577	GAR1	71	92.727	ENSACAG00000010031	GAR1	50	90.566	Anolis_carolinensis
ENSSTOG00000005577	GAR1	71	96.364	ENSANAG00000021608	GAR1	50	97.248	Aotus_nancymaae
ENSSTOG00000005577	GAR1	71	96.364	ENSBTAG00000000748	GAR1	52	96.330	Bos_taurus
ENSSTOG00000005577	GAR1	71	96.364	ENSCJAG00000004041	GAR1	50	97.248	Callithrix_jacchus
ENSSTOG00000005577	GAR1	68	96.154	ENSCAFG00020015566	GAR1	57	96.330	Canis_lupus_dingo
ENSSTOG00000005577	GAR1	53	92.683	ENSCHIG00000011049	-	55	83.486	Capra_hircus
ENSSTOG00000005577	GAR1	71	96.364	ENSCHIG00000016026	-	52	96.330	Capra_hircus
ENSSTOG00000005577	GAR1	99	92.405	ENSTSYG00000013668	-	67	97.163	Carlito_syrichta
ENSSTOG00000005577	GAR1	71	85.455	ENSTSYG00000026632	-	56	88.991	Carlito_syrichta
ENSSTOG00000005577	GAR1	71	94.545	ENSCAPG00000014977	-	69	94.545	Cavia_aperea
ENSSTOG00000005577	GAR1	71	96.364	ENSCPOG00000004216	GAR1	50	96.330	Cavia_porcellus
ENSSTOG00000005577	GAR1	71	96.364	ENSCCAG00000029372	GAR1	50	97.248	Cebus_capucinus
ENSSTOG00000005577	GAR1	71	96.364	ENSCATG00000021854	GAR1	55	97.248	Cercocebus_atys
ENSSTOG00000005577	GAR1	71	94.545	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSSTOG00000005577	GAR1	68	96.154	ENSCSAG00000003922	GAR1	55	97.248	Chlorocebus_sabaeus
ENSSTOG00000005577	GAR1	71	96.364	ENSCHOG00000007484	-	51	96.581	Choloepus_hoffmanni
ENSSTOG00000005577	GAR1	71	94.545	ENSCPBG00000004310	GAR1	55	88.991	Chrysemys_picta_bellii
ENSSTOG00000005577	GAR1	71	94.545	ENSCANG00000039262	GAR1	50	96.330	Colobus_angolensis_palliatus
ENSSTOG00000005577	GAR1	71	98.182	ENSCGRG00000010165	-	72	96.739	Cricetulus_griseus_crigri
ENSSTOG00000005577	GAR1	71	94.545	ENSCVAG00000002103	gar1	52	91.743	Cyprinodon_variegatus
ENSSTOG00000005577	GAR1	90	89.855	ENSDARG00000076526	gar1	53	85.714	Danio_rerio
ENSSTOG00000005577	GAR1	71	96.364	ENSDNOG00000037632	GAR1	72	96.454	Dasypus_novemcinctus
ENSSTOG00000005577	GAR1	71	96.364	ENSDORG00000000482	Gar1	50	94.495	Dipodomys_ordii
ENSSTOG00000005577	GAR1	71	96.364	ENSEASG00005004658	GAR1	50	95.413	Equus_asinus_asinus
ENSSTOG00000005577	GAR1	71	96.364	ENSECAG00000013624	GAR1	55	96.330	Equus_caballus
ENSSTOG00000005577	GAR1	83	49.162	ENSFCAG00000025841	-	57	62.185	Felis_catus
ENSSTOG00000005577	GAR1	71	96.364	ENSFCAG00000040791	-	52	96.330	Felis_catus
ENSSTOG00000005577	GAR1	100	93.750	ENSFDAG00000006333	-	100	93.750	Fukomys_damarensis
ENSSTOG00000005577	GAR1	71	92.727	ENSFHEG00000008068	gar1	51	90.826	Fundulus_heteroclitus
ENSSTOG00000005577	GAR1	69	96.226	ENSGAGG00000004393	GAR1	55	89.720	Gopherus_agassizii
ENSSTOG00000005577	GAR1	91	77.143	ENSGGOG00000036205	-	54	78.899	Gorilla_gorilla
ENSSTOG00000005577	GAR1	71	96.364	ENSGGOG00000008681	GAR1	50	96.330	Gorilla_gorilla
ENSSTOG00000005577	GAR1	100	94.805	ENSHGLG00000000493	GAR1	72	96.364	Heterocephalus_glaber_female
ENSSTOG00000005577	GAR1	100	94.805	ENSHGLG00100016873	-	72	96.364	Heterocephalus_glaber_male
ENSSTOG00000005577	GAR1	71	94.545	ENSHCOG00000008656	gar1	50	89.908	Hippocampus_comes
ENSSTOG00000005577	GAR1	71	94.545	ENSIPUG00000003194	gar1	52	88.991	Ictalurus_punctatus
ENSSTOG00000005577	GAR1	71	94.545	ENSKMAG00000010402	gar1	76	75.155	Kryptolebias_marmoratus
ENSSTOG00000005577	GAR1	71	92.727	ENSLACG00000003306	GAR1	64	87.736	Latimeria_chalumnae
ENSSTOG00000005577	GAR1	74	77.193	ENSMFAG00000003572	-	53	81.651	Macaca_fascicularis
ENSSTOG00000005577	GAR1	71	96.364	ENSMFAG00000024592	GAR1	50	97.248	Macaca_fascicularis
ENSSTOG00000005577	GAR1	71	96.364	ENSMMUG00000021225	GAR1	50	97.248	Macaca_mulatta
ENSSTOG00000005577	GAR1	71	96.364	ENSMNEG00000042594	GAR1	50	97.248	Macaca_nemestrina
ENSSTOG00000005577	GAR1	71	96.364	ENSMLEG00000002496	GAR1	50	97.248	Mandrillus_leucophaeus
ENSSTOG00000005577	GAR1	78	91.667	ENSMGAG00000011058	GAR1	66	81.333	Meleagris_gallopavo
ENSSTOG00000005577	GAR1	71	98.182	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSSTOG00000005577	GAR1	71	94.545	ENSMICG00000003326	GAR1	50	96.330	Microcebus_murinus
ENSSTOG00000005577	GAR1	71	96.364	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSSTOG00000005577	GAR1	71	96.364	ENSMMOG00000004156	gar1	52	94.393	Mola_mola
ENSSTOG00000005577	GAR1	71	94.545	ENSMALG00000009672	gar1	50	92.523	Monopterus_albus
ENSSTOG00000005577	GAR1	71	96.364	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSSTOG00000005577	GAR1	71	96.364	ENSMUSG00000028010	Gar1	97	91.870	Mus_musculus
ENSSTOG00000005577	GAR1	71	96.364	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSSTOG00000005577	GAR1	71	96.364	MGP_SPRETEiJ_G0026580	Gar1	97	91.870	Mus_spretus
ENSSTOG00000005577	GAR1	71	96.364	ENSMPUG00000008615	GAR1	52	96.330	Mustela_putorius_furo
ENSSTOG00000005577	GAR1	100	97.403	ENSNGAG00000008268	Gar1	100	97.403	Nannospalax_galili
ENSSTOG00000005577	GAR1	73	76.786	ENSNLEG00000034282	-	55	81.651	Nomascus_leucogenys
ENSSTOG00000005577	GAR1	71	96.364	ENSNLEG00000016578	GAR1	50	97.248	Nomascus_leucogenys
ENSSTOG00000005577	GAR1	99	94.805	ENSODEG00000011083	GAR1	56	94.495	Octodon_degus
ENSSTOG00000005577	GAR1	71	94.545	ENSOANG00000003665	GAR1	70	76.282	Ornithorhynchus_anatinus
ENSSTOG00000005577	GAR1	71	96.364	ENSOCUG00000003901	GAR1	100	94.954	Oryctolagus_cuniculus
ENSSTOG00000005577	GAR1	71	96.364	ENSORLG00000020583	gar1	50	91.743	Oryzias_latipes
ENSSTOG00000005577	GAR1	71	96.364	ENSORLG00020008602	gar1	50	91.743	Oryzias_latipes_hni
ENSSTOG00000005577	GAR1	71	96.364	ENSORLG00015017643	gar1	50	91.743	Oryzias_latipes_hsok
ENSSTOG00000005577	GAR1	100	97.674	ENSOGAG00000004693	GAR1	100	97.674	Otolemur_garnettii
ENSSTOG00000005577	GAR1	71	96.364	ENSOARG00000004910	GAR1	52	96.330	Ovis_aries
ENSSTOG00000005577	GAR1	71	96.364	ENSPPAG00000014081	GAR1	55	97.248	Pan_paniscus
ENSSTOG00000005577	GAR1	71	96.364	ENSPPRG00000023697	GAR1	52	96.330	Panthera_pardus
ENSSTOG00000005577	GAR1	71	96.364	ENSPTIG00000021565	GAR1	52	96.330	Panthera_tigris_altaica
ENSSTOG00000005577	GAR1	71	78.182	ENSPTRG00000049340	-	70	75.172	Pan_troglodytes
ENSSTOG00000005577	GAR1	71	96.364	ENSPTRG00000016364	GAR1	55	97.248	Pan_troglodytes
ENSSTOG00000005577	GAR1	74	77.193	ENSPANG00000033062	-	64	71.795	Papio_anubis
ENSSTOG00000005577	GAR1	71	96.364	ENSPANG00000000639	GAR1	50	97.248	Papio_anubis
ENSSTOG00000005577	GAR1	71	94.545	ENSPSIG00000002970	GAR1	50	88.991	Pelodiscus_sinensis
ENSSTOG00000005577	GAR1	71	98.182	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSSTOG00000005577	GAR1	71	94.545	ENSPFOG00000024155	gar1	52	90.826	Poecilia_formosa
ENSSTOG00000005577	GAR1	71	94.545	ENSPLAG00000015056	gar1	52	90.826	Poecilia_latipinna
ENSSTOG00000005577	GAR1	71	94.545	ENSPMEG00000009320	gar1	52	91.743	Poecilia_mexicana
ENSSTOG00000005577	GAR1	71	96.364	ENSPPYG00000014996	GAR1	50	97.248	Pongo_abelii
ENSSTOG00000005577	GAR1	68	96.154	ENSPCOG00000027049	GAR1	56	97.248	Propithecus_coquereli
ENSSTOG00000005577	GAR1	73	96.429	ENSRNOG00000061146	Gar1	64	95.413	Rattus_norvegicus
ENSSTOG00000005577	GAR1	71	96.364	ENSRBIG00000019547	GAR1	55	97.248	Rhinopithecus_bieti
ENSSTOG00000005577	GAR1	73	75.000	ENSRBIG00000042411	-	53	79.817	Rhinopithecus_bieti
ENSSTOG00000005577	GAR1	71	96.364	ENSRROG00000028454	GAR1	55	97.248	Rhinopithecus_roxellana
ENSSTOG00000005577	GAR1	73	75.000	ENSRROG00000044348	-	52	79.817	Rhinopithecus_roxellana
ENSSTOG00000005577	GAR1	71	96.364	ENSSBOG00000024785	GAR1	50	97.248	Saimiri_boliviensis_boliviensis
ENSSTOG00000005577	GAR1	71	94.545	ENSSMAG00000009976	gar1	50	88.991	Scophthalmus_maximus
ENSSTOG00000005577	GAR1	71	96.364	ENSSLDG00000023264	gar1	51	90.826	Seriola_lalandi_dorsalis
ENSSTOG00000005577	GAR1	71	94.545	ENSSPUG00000008707	GAR1	61	89.908	Sphenodon_punctatus
ENSSTOG00000005577	GAR1	71	96.364	ENSSPAG00000005974	gar1	52	90.678	Stegastes_partitus
ENSSTOG00000005577	GAR1	71	96.364	ENSSSCG00000009137	GAR1	54	96.330	Sus_scrofa
ENSSTOG00000005577	GAR1	78	93.333	ENSTGUG00000004185	GAR1	67	88.889	Taeniopygia_guttata
ENSSTOG00000005577	GAR1	84	87.692	ENSTRUG00000020580	gar1	52	88.073	Takifugu_rubripes
ENSSTOG00000005577	GAR1	68	94.231	ENSTNIG00000013023	gar1	62	90.826	Tetraodon_nigroviridis
ENSSTOG00000005577	GAR1	68	96.154	ENSUAMG00000005652	GAR1	57	96.330	Ursus_americanus
ENSSTOG00000005577	GAR1	71	96.364	ENSUMAG00000000776	GAR1	53	96.330	Ursus_maritimus
ENSSTOG00000005577	GAR1	71	96.364	ENSVVUG00000017612	GAR1	56	96.330	Vulpes_vulpes