EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000005898 (Gene tree)
Gene ID: 101976724
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 211898 bases
Position: chrJH393318.1:6534245-6746142
Accession: 101976724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000005287	S1	PF00575.23	4.4e-09	1	1
ENSSTOP00000029897	S1	PF00575.23	4.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000005908	SRBD1-202	2946	-	ENSSTOP00000005287	981 (aa)	-	I3M6X7
ENSSTOT00000033681	SRBD1-201	4976	XM_005324506	ENSSTOP00000029897	989 (aa)	XP_005324563	A0A287D8K0

Gene Model

Click here to download ENSSTOG00000005898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000005898's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000005898	SRBD1	100	90.553	ENSG00000068784	SRBD1	100	90.553	Homo_sapiens
ENSSTOG00000005898	SRBD1	100	51.906	ENSAPOG00000005103	si:ch211-117n7.8	99	52.043	Acanthochromis_polyacanthus
ENSSTOG00000005898	SRBD1	100	91.046	ENSAMEG00000005993	SRBD1	100	91.046	Ailuropoda_melanoleuca
ENSSTOG00000005898	SRBD1	83	58.901	ENSACIG00000009875	si:ch211-117n7.8	97	53.299	Amphilophus_citrinellus
ENSSTOG00000005898	SRBD1	99	52.419	ENSAOCG00000024718	si:ch211-117n7.8	99	52.709	Amphiprion_ocellaris
ENSSTOG00000005898	SRBD1	97	53.498	ENSAPEG00000002645	si:ch211-117n7.8	99	53.498	Amphiprion_percula
ENSSTOG00000005898	SRBD1	84	59.118	ENSATEG00000010844	si:ch211-117n7.8	99	52.579	Anabas_testudineus
ENSSTOG00000005898	SRBD1	100	71.457	ENSAPLG00000006313	SRBD1	100	72.183	Anas_platyrhynchos
ENSSTOG00000005898	SRBD1	100	90.352	ENSANAG00000025573	SRBD1	100	90.352	Aotus_nancymaae
ENSSTOG00000005898	SRBD1	85	57.715	ENSACLG00000024219	si:ch211-117n7.8	94	53.161	Astatotilapia_calliptera
ENSSTOG00000005898	SRBD1	90	59.867	ENSAMXG00000004294	SRBD1	93	58.501	Astyanax_mexicanus
ENSSTOG00000005898	SRBD1	100	95.570	ENSBTAG00000007508	SRBD1	99	95.570	Bos_taurus
ENSSTOG00000005898	SRBD1	100	89.548	ENSCJAG00000000727	SRBD1	100	89.548	Callithrix_jacchus
ENSSTOG00000005898	SRBD1	100	90.973	ENSCAFG00000002554	SRBD1	100	90.973	Canis_familiaris
ENSSTOG00000005898	SRBD1	100	88.052	ENSCAFG00020026284	SRBD1	99	92.136	Canis_lupus_dingo
ENSSTOG00000005898	SRBD1	100	88.956	ENSCHIG00000016535	SRBD1	98	89.659	Capra_hircus
ENSSTOG00000005898	SRBD1	100	91.383	ENSTSYG00000012797	SRBD1	100	91.383	Carlito_syrichta
ENSSTOG00000005898	SRBD1	100	91.423	ENSCPOG00000004773	SRBD1	100	91.423	Cavia_porcellus
ENSSTOG00000005898	SRBD1	100	91.055	ENSCCAG00000025589	SRBD1	100	91.055	Cebus_capucinus
ENSSTOG00000005898	SRBD1	100	90.854	ENSCATG00000039530	SRBD1	100	90.854	Cercocebus_atys
ENSSTOG00000005898	SRBD1	100	92.246	ENSCLAG00000008623	SRBD1	100	92.246	Chinchilla_lanigera
ENSSTOG00000005898	SRBD1	100	91.256	ENSCSAG00000013350	SRBD1	100	91.256	Chlorocebus_sabaeus
ENSSTOG00000005898	SRBD1	87	94.268	ENSCHOG00000003805	SRBD1	87	94.268	Choloepus_hoffmanni
ENSSTOG00000005898	SRBD1	100	73.821	ENSCPBG00000005677	SRBD1	100	74.223	Chrysemys_picta_bellii
ENSSTOG00000005898	SRBD1	79	42.548	ENSCING00000005950	-	99	42.548	Ciona_intestinalis
ENSSTOG00000005898	SRBD1	80	43.439	ENSCSAVG00000000861	-	99	43.439	Ciona_savignyi
ENSSTOG00000005898	SRBD1	99	90.634	ENSCANG00000016307	SRBD1	99	90.634	Colobus_angolensis_palliatus
ENSSTOG00000005898	SRBD1	100	87.538	ENSCGRG00001000513	Srbd1	100	87.538	Cricetulus_griseus_chok1gshd
ENSSTOG00000005898	SRBD1	100	87.538	ENSCGRG00000002283	Srbd1	100	87.538	Cricetulus_griseus_crigri
ENSSTOG00000005898	SRBD1	100	51.479	ENSCSEG00000000856	si:ch211-117n7.8	99	51.578	Cynoglossus_semilaevis
ENSSTOG00000005898	SRBD1	84	58.880	ENSCVAG00000020212	si:ch211-117n7.8	89	58.880	Cyprinodon_variegatus
ENSSTOG00000005898	SRBD1	100	89.790	ENSDNOG00000018686	SRBD1	100	89.790	Dasypus_novemcinctus
ENSSTOG00000005898	SRBD1	100	89.206	ENSDORG00000010468	Srbd1	100	89.206	Dipodomys_ordii
ENSSTOG00000005898	SRBD1	94	33.874	FBgn0051156	CG31156	98	34.077	Drosophila_melanogaster
ENSSTOG00000005898	SRBD1	89	84.755	ENSETEG00000000739	SRBD1	92	84.755	Echinops_telfairi
ENSSTOG00000005898	SRBD1	73	48.219	ENSEBUG00000008902	si:ch211-117n7.8	96	48.219	Eptatretus_burgeri
ENSSTOG00000005898	SRBD1	100	88.454	ENSEASG00005003132	SRBD1	97	92.994	Equus_asinus_asinus
ENSSTOG00000005898	SRBD1	100	91.867	ENSECAG00000013865	SRBD1	98	91.867	Equus_caballus
ENSSTOG00000005898	SRBD1	86	60.000	ENSELUG00000012592	si:ch211-117n7.8	82	60.000	Esox_lucius
ENSSTOG00000005898	SRBD1	100	91.867	ENSFCAG00000005101	SRBD1	100	91.867	Felis_catus
ENSSTOG00000005898	SRBD1	100	69.369	ENSFALG00000012966	SRBD1	100	70.040	Ficedula_albicollis
ENSSTOG00000005898	SRBD1	98	90.700	ENSFDAG00000016670	SRBD1	99	90.700	Fukomys_damarensis
ENSSTOG00000005898	SRBD1	88	57.466	ENSFHEG00000019480	si:ch211-117n7.8	85	57.583	Fundulus_heteroclitus
ENSSTOG00000005898	SRBD1	51	53.273	ENSGMOG00000018010	-	100	53.563	Gadus_morhua
ENSSTOG00000005898	SRBD1	100	70.854	ENSGALG00000009990	SRBD1	100	71.229	Gallus_gallus
ENSSTOG00000005898	SRBD1	98	52.637	ENSGAFG00000019664	si:ch211-117n7.8	98	53.006	Gambusia_affinis
ENSSTOG00000005898	SRBD1	63	61.440	ENSGACG00000010794	si:ch211-117n7.8	100	61.760	Gasterosteus_aculeatus
ENSSTOG00000005898	SRBD1	84	81.655	ENSGAGG00000006166	SRBD1	99	81.655	Gopherus_agassizii
ENSSTOG00000005898	SRBD1	97	91.125	ENSGGOG00000005910	SRBD1	100	91.116	Gorilla_gorilla
ENSSTOG00000005898	SRBD1	85	51.319	ENSHBUG00000013207	si:ch211-117n7.8	86	51.319	Haplochromis_burtoni
ENSSTOG00000005898	SRBD1	99	91.939	ENSHGLG00000018153	-	99	91.939	Heterocephalus_glaber_female
ENSSTOG00000005898	SRBD1	99	91.837	ENSHGLG00100015183	-	99	91.837	Heterocephalus_glaber_male
ENSSTOG00000005898	SRBD1	85	62.426	ENSIPUG00000009661	srbd1	93	57.367	Ictalurus_punctatus
ENSSTOG00000005898	SRBD1	100	82.520	ENSJJAG00000022244	Srbd1	100	82.520	Jaculus_jaculus
ENSSTOG00000005898	SRBD1	97	52.786	ENSKMAG00000003473	si:ch211-117n7.8	97	52.786	Kryptolebias_marmoratus
ENSSTOG00000005898	SRBD1	84	57.951	ENSLBEG00000027518	si:ch211-117n7.8	83	57.951	Labrus_bergylta
ENSSTOG00000005898	SRBD1	85	71.479	ENSLACG00000009790	SRBD1	100	71.124	Latimeria_chalumnae
ENSSTOG00000005898	SRBD1	100	58.036	ENSLOCG00000016360	si:ch211-117n7.8	99	58.300	Lepisosteus_oculatus
ENSSTOG00000005898	SRBD1	100	91.357	ENSMFAG00000042026	SRBD1	100	91.357	Macaca_fascicularis
ENSSTOG00000005898	SRBD1	100	91.055	ENSMMUG00000003490	SRBD1	100	91.055	Macaca_mulatta
ENSSTOG00000005898	SRBD1	100	88.643	ENSMNEG00000034701	SRBD1	100	88.643	Macaca_nemestrina
ENSSTOG00000005898	SRBD1	100	91.055	ENSMLEG00000000745	SRBD1	100	91.055	Mandrillus_leucophaeus
ENSSTOG00000005898	SRBD1	82	57.108	ENSMAMG00000021921	si:ch211-117n7.8	98	51.561	Mastacembelus_armatus
ENSSTOG00000005898	SRBD1	85	57.715	ENSMZEG00005027369	si:ch211-117n7.8	94	53.161	Maylandia_zebra
ENSSTOG00000005898	SRBD1	80	76.817	ENSMGAG00000010273	SRBD1	100	76.817	Meleagris_gallopavo
ENSSTOG00000005898	SRBD1	81	86.467	ENSMAUG00000013916	Srbd1	99	86.467	Mesocricetus_auratus
ENSSTOG00000005898	SRBD1	100	91.960	ENSMICG00000007835	SRBD1	100	91.960	Microcebus_murinus
ENSSTOG00000005898	SRBD1	100	86.396	ENSMOCG00000018716	Srbd1	100	86.396	Microtus_ochrogaster
ENSSTOG00000005898	SRBD1	84	57.720	ENSMMOG00000007507	si:ch211-117n7.8	87	57.720	Mola_mola
ENSSTOG00000005898	SRBD1	99	50.784	ENSMALG00000001562	si:ch211-117n7.8	99	51.619	Monopterus_albus
ENSSTOG00000005898	SRBD1	100	84.248	MGP_CAROLIEiJ_G0021934	Srbd1	99	87.908	Mus_caroli
ENSSTOG00000005898	SRBD1	100	84.451	ENSMUSG00000024135	Srbd1	100	84.772	Mus_musculus
ENSSTOG00000005898	SRBD1	100	83.537	MGP_PahariEiJ_G0020924	Srbd1	100	83.537	Mus_pahari
ENSSTOG00000005898	SRBD1	100	84.654	MGP_SPRETEiJ_G0022850	Srbd1	100	84.654	Mus_spretus
ENSSTOG00000005898	SRBD1	100	87.851	ENSMLUG00000007039	SRBD1	100	87.851	Myotis_lucifugus
ENSSTOG00000005898	SRBD1	100	85.192	ENSNGAG00000011893	Srbd1	100	85.192	Nannospalax_galili
ENSSTOG00000005898	SRBD1	84	57.143	ENSNBRG00000012873	si:ch211-117n7.8	85	57.143	Neolamprologus_brichardi
ENSSTOG00000005898	SRBD1	100	90.653	ENSNLEG00000016877	SRBD1	100	90.653	Nomascus_leucogenys
ENSSTOG00000005898	SRBD1	100	88.787	ENSODEG00000012095	SRBD1	100	88.787	Octodon_degus
ENSSTOG00000005898	SRBD1	100	50.385	ENSONIG00000000945	si:ch211-117n7.8	100	58.944	Oreochromis_niloticus
ENSSTOG00000005898	SRBD1	100	92.936	ENSOCUG00000015385	SRBD1	100	92.936	Oryctolagus_cuniculus
ENSSTOG00000005898	SRBD1	85	54.693	ENSORLG00000004427	si:ch211-117n7.8	84	54.693	Oryzias_latipes
ENSSTOG00000005898	SRBD1	85	56.895	ENSORLG00020012792	si:ch211-117n7.8	84	57.523	Oryzias_latipes_hni
ENSSTOG00000005898	SRBD1	85	57.425	ENSORLG00015018598	si:ch211-117n7.8	84	57.425	Oryzias_latipes_hsok
ENSSTOG00000005898	SRBD1	96	52.708	ENSOMEG00000012229	si:ch211-117n7.8	81	57.590	Oryzias_melastigma
ENSSTOG00000005898	SRBD1	100	85.643	ENSOGAG00000001076	SRBD1	100	85.643	Otolemur_garnettii
ENSSTOG00000005898	SRBD1	100	84.481	ENSOARG00000005958	SRBD1	100	85.160	Ovis_aries
ENSSTOG00000005898	SRBD1	100	90.653	ENSPPAG00000038442	SRBD1	100	90.653	Pan_paniscus
ENSSTOG00000005898	SRBD1	100	91.859	ENSPPRG00000003449	SRBD1	100	91.859	Panthera_pardus
ENSSTOG00000005898	SRBD1	100	91.960	ENSPTIG00000012495	SRBD1	100	91.960	Panthera_tigris_altaica
ENSSTOG00000005898	SRBD1	100	90.854	ENSPTRG00000011889	SRBD1	100	90.854	Pan_troglodytes
ENSSTOG00000005898	SRBD1	100	90.955	ENSPANG00000008063	SRBD1	100	90.955	Papio_anubis
ENSSTOG00000005898	SRBD1	87	59.144	ENSPKIG00000021973	si:ch211-117n7.8	99	54.675	Paramormyrops_kingsleyae
ENSSTOG00000005898	SRBD1	100	73.589	ENSPSIG00000008992	SRBD1	100	73.992	Pelodiscus_sinensis
ENSSTOG00000005898	SRBD1	89	53.761	ENSPMGG00000013348	si:ch211-117n7.8	99	50.955	Periophthalmus_magnuspinnatus
ENSSTOG00000005898	SRBD1	100	85.714	ENSPEMG00000020684	Srbd1	100	85.714	Peromyscus_maniculatus_bairdii
ENSSTOG00000005898	SRBD1	98	52.542	ENSPFOG00000010650	si:ch211-117n7.8	98	52.542	Poecilia_formosa
ENSSTOG00000005898	SRBD1	98	52.443	ENSPLAG00000002141	si:ch211-117n7.8	98	52.443	Poecilia_latipinna
ENSSTOG00000005898	SRBD1	98	52.642	ENSPMEG00000018537	si:ch211-117n7.8	98	52.642	Poecilia_mexicana
ENSSTOG00000005898	SRBD1	97	52.503	ENSPREG00000003258	si:ch211-117n7.8	98	52.503	Poecilia_reticulata
ENSSTOG00000005898	SRBD1	100	83.318	ENSPPYG00000012444	SRBD1	99	83.318	Pongo_abelii
ENSSTOG00000005898	SRBD1	82	84.027	ENSPCAG00000005629	SRBD1	86	84.027	Procavia_capensis
ENSSTOG00000005898	SRBD1	100	78.958	ENSPCOG00000017669	SRBD1	100	78.958	Propithecus_coquereli
ENSSTOG00000005898	SRBD1	100	80.905	ENSPVAG00000001782	SRBD1	100	80.905	Pteropus_vampyrus
ENSSTOG00000005898	SRBD1	85	55.012	ENSPNYG00000000508	si:ch211-117n7.8	86	55.012	Pundamilia_nyererei
ENSSTOG00000005898	SRBD1	96	57.232	ENSPNAG00000013492	SRBD1	95	57.856	Pygocentrus_nattereri
ENSSTOG00000005898	SRBD1	100	83.723	ENSRNOG00000014720	Srbd1	99	84.264	Rattus_norvegicus
ENSSTOG00000005898	SRBD1	99	90.634	ENSRBIG00000033486	SRBD1	99	90.634	Rhinopithecus_bieti
ENSSTOG00000005898	SRBD1	99	90.634	ENSRROG00000041599	SRBD1	99	90.634	Rhinopithecus_roxellana
ENSSTOG00000005898	SRBD1	100	90.151	ENSSBOG00000024982	SRBD1	100	90.151	Saimiri_boliviensis_boliviensis
ENSSTOG00000005898	SRBD1	89	57.731	ENSSFOG00015001128	si:ch211-117n7.8	96	58.249	Scleropages_formosus
ENSSTOG00000005898	SRBD1	84	58.929	ENSSMAG00000018256	si:ch211-117n7.8	82	58.929	Scophthalmus_maximus
ENSSTOG00000005898	SRBD1	84	58.452	ENSSLDG00000023189	si:ch211-117n7.8	83	58.452	Seriola_lalandi_dorsalis
ENSSTOG00000005898	SRBD1	100	79.594	ENSSARG00000009740	SRBD1	100	79.594	Sorex_araneus
ENSSTOG00000005898	SRBD1	85	79.952	ENSSPUG00000010475	SRBD1	100	73.355	Sphenodon_punctatus
ENSSTOG00000005898	SRBD1	84	56.295	ENSSPAG00000008092	-	84	56.517	Stegastes_partitus
ENSSTOG00000005898	SRBD1	100	90.271	ENSSSCG00000008445	SRBD1	98	90.873	Sus_scrofa
ENSSTOG00000005898	SRBD1	84	78.675	ENSTGUG00000003878	SRBD1	100	78.675	Taeniopygia_guttata
ENSSTOG00000005898	SRBD1	99	51.562	ENSTRUG00000007080	si:ch211-117n7.8	99	51.562	Takifugu_rubripes
ENSSTOG00000005898	SRBD1	99	50.196	ENSTNIG00000007464	si:ch211-117n7.8	99	50.196	Tetraodon_nigroviridis
ENSSTOG00000005898	SRBD1	83	97.872	ENSTBEG00000004556	SRBD1	82	97.872	Tupaia_belangeri
ENSSTOG00000005898	SRBD1	94	91.244	ENSTTRG00000011871	SRBD1	94	91.244	Tursiops_truncatus
ENSSTOG00000005898	SRBD1	100	91.466	ENSUAMG00000008126	SRBD1	100	89.842	Ursus_americanus
ENSSTOG00000005898	SRBD1	100	91.466	ENSUMAG00000012902	SRBD1	98	91.466	Ursus_maritimus
ENSSTOG00000005898	SRBD1	91	92.723	ENSVPAG00000006825	SRBD1	100	92.723	Vicugna_pacos
ENSSTOG00000005898	SRBD1	100	90.361	ENSVVUG00000005389	SRBD1	100	90.964	Vulpes_vulpes
ENSSTOG00000005898	SRBD1	100	52.372	ENSXETG00000002760	srbd1	100	52.372	Xenopus_tropicalis
ENSSTOG00000005898	SRBD1	98	52.800	ENSXMAG00000016861	si:ch211-117n7.8	98	52.800	Xiphophorus_maculatus