EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000005986 (Gene tree)
Gene ID: 101965120
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Plus strand
Length: 14167 bases
Position: chrJH393297.1:17656311-17670477
Accession: 101965120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000005349	zf-C2H2	PF00096.26	8.8e-13	1	2
ENSSTOP00000005349	zf-C2H2	PF00096.26	8.8e-13	2	2
ENSSTOP00000005349	zf-met	PF12874.7	8.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000005981	PRDM12-201	1149	XM_005321180	ENSSTOP00000005349	382 (aa)	XP_005321237	I3M725

Gene Model

Click here to download ENSSTOG00000005986's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000005986's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000005986	PRDM12	58	48.077	ENSSTOG00000004741	PRDM5	96	48.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000005986	PRDM12	87	98.503	ENSG00000130711	PRDM12	99	93.407	Homo_sapiens
ENSSTOG00000005986	PRDM12	86	79.202	ENSAPOG00000016051	prdm12b	94	77.839	Acanthochromis_polyacanthus
ENSSTOG00000005986	PRDM12	92	65.546	ENSAPOG00000018234	-	97	65.922	Acanthochromis_polyacanthus
ENSSTOG00000005986	PRDM12	85	94.427	ENSAMEG00000016234	PRDM12	99	94.427	Ailuropoda_melanoleuca
ENSSTOG00000005986	PRDM12	90	76.839	ENSACIG00000005193	-	97	76.839	Amphilophus_citrinellus
ENSSTOG00000005986	PRDM12	87	79.827	ENSACIG00000019578	prdm12b	95	78.552	Amphilophus_citrinellus
ENSSTOG00000005986	PRDM12	86	80.692	ENSAOCG00000015040	prdm12b	94	79.272	Amphiprion_ocellaris
ENSSTOG00000005986	PRDM12	86	81.395	ENSAPEG00000015092	prdm12b	94	79.944	Amphiprion_percula
ENSSTOG00000005986	PRDM12	85	79.464	ENSAPEG00000022849	-	89	78.717	Amphiprion_percula
ENSSTOG00000005986	PRDM12	88	80.994	ENSATEG00000014595	-	99	80.994	Anabas_testudineus
ENSSTOG00000005986	PRDM12	88	98.817	ENSANAG00000020616	PRDM12	99	98.817	Aotus_nancymaae
ENSSTOG00000005986	PRDM12	85	81.579	ENSACLG00000007631	-	87	81.579	Astatotilapia_calliptera
ENSSTOG00000005986	PRDM12	93	78.611	ENSACLG00000011876	prdm12b	99	78.611	Astatotilapia_calliptera
ENSSTOG00000005986	PRDM12	86	88.323	ENSAMXG00000033665	prdm12b	95	86.286	Astyanax_mexicanus
ENSSTOG00000005986	PRDM12	89	82.301	ENSAMXG00000008540	PRDM12	94	82.301	Astyanax_mexicanus
ENSSTOG00000005986	PRDM12	87	99.102	ENSBTAG00000023797	PRDM12	99	95.251	Bos_taurus
ENSSTOG00000005986	PRDM12	87	98.802	ENSCJAG00000020540	PRDM12	99	95.531	Callithrix_jacchus
ENSSTOG00000005986	PRDM12	76	98.282	ENSCAFG00000023076	PRDM12	99	93.417	Canis_familiaris
ENSSTOG00000005986	PRDM12	87	99.401	ENSCAFG00020024046	PRDM12	99	95.028	Canis_lupus_dingo
ENSSTOG00000005986	PRDM12	87	99.401	ENSCHIG00000025005	PRDM12	99	95.556	Capra_hircus
ENSSTOG00000005986	PRDM12	82	98.722	ENSCPOG00000005901	PRDM12	95	98.722	Cavia_porcellus
ENSSTOG00000005986	PRDM12	87	98.802	ENSCCAG00000037485	PRDM12	99	94.737	Cebus_capucinus
ENSSTOG00000005986	PRDM12	87	98.802	ENSCATG00000020327	PRDM12	99	94.737	Cercocebus_atys
ENSSTOG00000005986	PRDM12	87	98.503	ENSCLAG00000005499	PRDM12	92	98.503	Chinchilla_lanigera
ENSSTOG00000005986	PRDM12	87	98.802	ENSCSAG00000014756	PRDM12	99	94.475	Chlorocebus_sabaeus
ENSSTOG00000005986	PRDM12	88	93.195	ENSCPBG00000022628	PRDM12	95	93.195	Chrysemys_picta_bellii
ENSSTOG00000005986	PRDM12	87	99.701	ENSCGRG00001015005	Prdm12	99	95.041	Cricetulus_griseus_chok1gshd
ENSSTOG00000005986	PRDM12	86	77.778	ENSCVAG00000000944	-	90	77.778	Cyprinodon_variegatus
ENSSTOG00000005986	PRDM12	86	82.544	ENSCVAG00000017166	prdm12b	92	82.111	Cyprinodon_variegatus
ENSSTOG00000005986	PRDM12	90	84.181	ENSDARG00000007430	prdm12b	97	84.181	Danio_rerio
ENSSTOG00000005986	PRDM12	87	98.503	ENSDNOG00000042302	PRDM12	99	94.693	Dasypus_novemcinctus
ENSSTOG00000005986	PRDM12	85	62.393	ENSEBUG00000016780	prdm12b	78	63.818	Eptatretus_burgeri
ENSSTOG00000005986	PRDM12	88	99.112	ENSEASG00005008472	PRDM12	99	95.278	Equus_asinus_asinus
ENSSTOG00000005986	PRDM12	88	98.817	ENSECAG00000005933	PRDM12	99	95.000	Equus_caballus
ENSSTOG00000005986	PRDM12	90	82.451	ENSELUG00000009905	prdm12b	97	82.451	Esox_lucius
ENSSTOG00000005986	PRDM12	85	83.333	ENSELUG00000013674	PRDM12	89	83.333	Esox_lucius
ENSSTOG00000005986	PRDM12	87	99.401	ENSFCAG00000043086	PRDM12	99	95.291	Felis_catus
ENSSTOG00000005986	PRDM12	88	93.491	ENSFALG00000001445	PRDM12	85	93.491	Ficedula_albicollis
ENSSTOG00000005986	PRDM12	85	82.789	ENSFHEG00000003944	prdm12b	96	79.888	Fundulus_heteroclitus
ENSSTOG00000005986	PRDM12	86	79.300	ENSFHEG00000007746	-	89	79.592	Fundulus_heteroclitus
ENSSTOG00000005986	PRDM12	87	82.282	ENSGMOG00000011797	prdm12b	99	79.429	Gadus_morhua
ENSSTOG00000005986	PRDM12	88	93.491	ENSGALG00000003895	PRDM12	95	93.491	Gallus_gallus
ENSSTOG00000005986	PRDM12	87	82.596	ENSGAFG00000010827	prdm12b	94	80.170	Gambusia_affinis
ENSSTOG00000005986	PRDM12	93	78.962	ENSGACG00000016713	prdm12b	97	78.962	Gasterosteus_aculeatus
ENSSTOG00000005986	PRDM12	88	93.491	ENSGAGG00000014083	PRDM12	95	93.491	Gopherus_agassizii
ENSSTOG00000005986	PRDM12	87	98.204	ENSGGOG00000010568	PRDM12	99	93.664	Gorilla_gorilla
ENSSTOG00000005986	PRDM12	85	81.579	ENSHBUG00000022537	-	80	81.579	Haplochromis_burtoni
ENSSTOG00000005986	PRDM12	93	77.089	ENSHBUG00000022878	prdm12b	99	77.089	Haplochromis_burtoni
ENSSTOG00000005986	PRDM12	87	98.204	ENSHGLG00000013939	PRDM12	99	93.646	Heterocephalus_glaber_female
ENSSTOG00000005986	PRDM12	90	75.645	ENSHCOG00000021167	-	97	75.645	Hippocampus_comes
ENSSTOG00000005986	PRDM12	85	81.287	ENSHCOG00000003663	prdm12b	93	78.415	Hippocampus_comes
ENSSTOG00000005986	PRDM12	86	87.126	ENSIPUG00000017053	prdm12b	94	85.303	Ictalurus_punctatus
ENSSTOG00000005986	PRDM12	93	77.222	ENSIPUG00000019544	PRDM12	97	77.222	Ictalurus_punctatus
ENSSTOG00000005986	PRDM12	86	99.697	ENSJJAG00000005424	Prdm12	100	99.697	Jaculus_jaculus
ENSSTOG00000005986	PRDM12	86	78.492	ENSKMAG00000016921	prdm12b	92	75.526	Kryptolebias_marmoratus
ENSSTOG00000005986	PRDM12	84	81.651	ENSKMAG00000021205	-	87	84.516	Kryptolebias_marmoratus
ENSSTOG00000005986	PRDM12	85	81.306	ENSLBEG00000007776	-	89	81.602	Labrus_bergylta
ENSSTOG00000005986	PRDM12	85	83.832	ENSLBEG00000017769	prdm12b	94	80.282	Labrus_bergylta
ENSSTOG00000005986	PRDM12	88	90.208	ENSLACG00000017560	PRDM12	95	90.208	Latimeria_chalumnae
ENSSTOG00000005986	PRDM12	87	86.136	ENSLOCG00000005429	prdm12b	98	84.225	Lepisosteus_oculatus
ENSSTOG00000005986	PRDM12	92	95.531	ENSLAFG00000006979	PRDM12	95	95.531	Loxodonta_africana
ENSSTOG00000005986	PRDM12	88	98.817	ENSMFAG00000040322	PRDM12	92	98.817	Macaca_fascicularis
ENSSTOG00000005986	PRDM12	87	98.802	ENSMNEG00000037234	PRDM12	99	94.737	Macaca_nemestrina
ENSSTOG00000005986	PRDM12	86	82.405	ENSMAMG00000013212	prdm12b	95	80.056	Mastacembelus_armatus
ENSSTOG00000005986	PRDM12	85	81.250	ENSMAMG00000018988	-	86	81.548	Mastacembelus_armatus
ENSSTOG00000005986	PRDM12	85	81.579	ENSMZEG00005000415	PRDM12	86	81.579	Maylandia_zebra
ENSSTOG00000005986	PRDM12	88	93.491	ENSMGAG00000005438	PRDM12	95	93.491	Meleagris_gallopavo
ENSSTOG00000005986	PRDM12	88	99.408	ENSMAUG00000013040	Prdm12	93	99.408	Mesocricetus_auratus
ENSSTOG00000005986	PRDM12	88	99.408	ENSMICG00000015480	PRDM12	99	95.543	Microcebus_murinus
ENSSTOG00000005986	PRDM12	90	97.965	ENSMOCG00000021026	Prdm12	92	99.408	Microtus_ochrogaster
ENSSTOG00000005986	PRDM12	88	95.562	ENSMODG00000012108	PRDM12	95	95.562	Monodelphis_domestica
ENSSTOG00000005986	PRDM12	90	68.272	ENSMALG00000021901	prdm12b	94	68.272	Monopterus_albus
ENSSTOG00000005986	PRDM12	87	99.401	MGP_CAROLIEiJ_G0023414	Prdm12	99	94.751	Mus_caroli
ENSSTOG00000005986	PRDM12	87	99.401	ENSMUSG00000079466	Prdm12	99	94.751	Mus_musculus
ENSSTOG00000005986	PRDM12	87	99.401	MGP_PahariEiJ_G0024871	Prdm12	99	94.751	Mus_pahari
ENSSTOG00000005986	PRDM12	87	99.401	MGP_SPRETEiJ_G0024331	Prdm12	99	94.751	Mus_spretus
ENSSTOG00000005986	PRDM12	86	99.083	ENSNGAG00000018480	Prdm12	99	93.296	Nannospalax_galili
ENSSTOG00000005986	PRDM12	87	76.608	ENSNBRG00000024312	-	95	76.608	Neolamprologus_brichardi
ENSSTOG00000005986	PRDM12	87	80.172	ENSNBRG00000006727	prdm12b	99	76.471	Neolamprologus_brichardi
ENSSTOG00000005986	PRDM12	88	84.615	ENSMEUG00000003828	PRDM12	95	84.615	Notamacropus_eugenii
ENSSTOG00000005986	PRDM12	86	98.182	ENSOPRG00000008680	PRDM12	100	98.182	Ochotona_princeps
ENSSTOG00000005986	PRDM12	88	99.112	ENSODEG00000016282	PRDM12	63	99.112	Octodon_degus
ENSSTOG00000005986	PRDM12	53	97.015	ENSOANG00000001043	PRDM12	93	97.015	Ornithorhynchus_anatinus
ENSSTOG00000005986	PRDM12	82	92.971	ENSOCUG00000008241	PRDM12	100	92.971	Oryctolagus_cuniculus
ENSSTOG00000005986	PRDM12	93	77.273	ENSORLG00000007114	prdm12b	97	77.273	Oryzias_latipes
ENSSTOG00000005986	PRDM12	85	79.765	ENSORLG00000017558	-	87	80.352	Oryzias_latipes
ENSSTOG00000005986	PRDM12	86	81.395	ENSORLG00020019565	prdm12b	97	76.738	Oryzias_latipes_hni
ENSSTOG00000005986	PRDM12	85	79.825	ENSORLG00020013167	-	87	80.117	Oryzias_latipes_hni
ENSSTOG00000005986	PRDM12	85	79.765	ENSORLG00015003435	-	87	80.352	Oryzias_latipes_hsok
ENSSTOG00000005986	PRDM12	86	81.105	ENSORLG00015007621	prdm12b	96	79.121	Oryzias_latipes_hsok
ENSSTOG00000005986	PRDM12	88	76.944	ENSOMEG00000007762	-	96	77.222	Oryzias_melastigma
ENSSTOG00000005986	PRDM12	89	79.109	ENSOMEG00000004134	prdm12b	96	78.474	Oryzias_melastigma
ENSSTOG00000005986	PRDM12	87	99.399	ENSOGAG00000007557	PRDM12	100	99.399	Otolemur_garnettii
ENSSTOG00000005986	PRDM12	75	97.909	ENSPPAG00000031506	-	97	97.909	Pan_paniscus
ENSSTOG00000005986	PRDM12	88	90.560	ENSPPRG00000023024	PRDM12	87	90.560	Panthera_pardus
ENSSTOG00000005986	PRDM12	87	98.503	ENSPTRG00000043324	-	99	93.939	Pan_troglodytes
ENSSTOG00000005986	PRDM12	87	98.503	ENSPTRG00000021475	PRDM12	99	93.939	Pan_troglodytes
ENSSTOG00000005986	PRDM12	87	98.802	ENSPANG00000025967	PRDM12	99	94.737	Papio_anubis
ENSSTOG00000005986	PRDM12	89	77.429	ENSPKIG00000004305	PRDM12	99	77.429	Paramormyrops_kingsleyae
ENSSTOG00000005986	PRDM12	87	85.057	ENSPKIG00000007228	prdm12b	97	83.611	Paramormyrops_kingsleyae
ENSSTOG00000005986	PRDM12	88	93.195	ENSPSIG00000006739	PRDM12	95	93.195	Pelodiscus_sinensis
ENSSTOG00000005986	PRDM12	87	80.952	ENSPMGG00000002356	-	88	80.655	Periophthalmus_magnuspinnatus
ENSSTOG00000005986	PRDM12	86	83.136	ENSPMGG00000008867	prdm12b	95	81.303	Periophthalmus_magnuspinnatus
ENSSTOG00000005986	PRDM12	87	99.699	ENSPEMG00000009969	Prdm12	97	94.901	Peromyscus_maniculatus_bairdii
ENSSTOG00000005986	PRDM12	88	95.858	ENSPCIG00000024119	PRDM12	95	95.858	Phascolarctos_cinereus
ENSSTOG00000005986	PRDM12	87	82.216	ENSPFOG00000019841	prdm12b	93	82.216	Poecilia_formosa
ENSSTOG00000005986	PRDM12	86	83.333	ENSPLAG00000016626	prdm12b	96	78.904	Poecilia_latipinna
ENSSTOG00000005986	PRDM12	84	82.371	ENSPMEG00000016698	prdm12b	95	79.310	Poecilia_mexicana
ENSSTOG00000005986	PRDM12	83	77.982	ENSPREG00000003211	-	90	77.982	Poecilia_reticulata
ENSSTOG00000005986	PRDM12	86	83.186	ENSPREG00000015073	prdm12b	89	82.749	Poecilia_reticulata
ENSSTOG00000005986	PRDM12	91	96.243	ENSPPYG00000019694	PRDM12	98	96.243	Pongo_abelii
ENSSTOG00000005986	PRDM12	87	99.401	ENSPCOG00000022255	PRDM12	99	94.766	Propithecus_coquereli
ENSSTOG00000005986	PRDM12	87	99.102	ENSPVAG00000001511	PRDM12	99	94.215	Pteropus_vampyrus
ENSSTOG00000005986	PRDM12	93	76.408	ENSPNYG00000009607	prdm12b	99	76.408	Pundamilia_nyererei
ENSSTOG00000005986	PRDM12	85	81.579	ENSPNYG00000013589	-	86	81.579	Pundamilia_nyererei
ENSSTOG00000005986	PRDM12	86	88.922	ENSPNAG00000024532	prdm12b	97	85.955	Pygocentrus_nattereri
ENSSTOG00000005986	PRDM12	85	80.547	ENSPNAG00000013396	PRDM12	93	77.971	Pygocentrus_nattereri
ENSSTOG00000005986	PRDM12	87	99.401	ENSRNOG00000009218	Prdm12	99	94.751	Rattus_norvegicus
ENSSTOG00000005986	PRDM12	83	98.738	ENSRBIG00000042712	PRDM12	96	91.061	Rhinopithecus_bieti
ENSSTOG00000005986	PRDM12	84	98.754	ENSRROG00000043554	PRDM12	100	98.754	Rhinopithecus_roxellana
ENSSTOG00000005986	PRDM12	88	94.985	ENSSHAG00000015972	PRDM12	95	94.985	Sarcophilus_harrisii
ENSSTOG00000005986	PRDM12	86	79.772	ENSSMAG00000003754	prdm12b	94	78.202	Scophthalmus_maximus
ENSSTOG00000005986	PRDM12	89	78.689	ENSSDUG00000023498	prdm12b	95	78.689	Seriola_dumerili
ENSSTOG00000005986	PRDM12	88	80.994	ENSSDUG00000019071	-	95	81.287	Seriola_dumerili
ENSSTOG00000005986	PRDM12	89	79.063	ENSSLDG00000009557	prdm12b	95	79.339	Seriola_lalandi_dorsalis
ENSSTOG00000005986	PRDM12	85	84.049	ENSSLDG00000013562	-	93	84.356	Seriola_lalandi_dorsalis
ENSSTOG00000005986	PRDM12	88	92.899	ENSSPUG00000013424	PRDM12	95	92.899	Sphenodon_punctatus
ENSSTOG00000005986	PRDM12	85	81.871	ENSSPAG00000018824	prdm12b	94	79.050	Stegastes_partitus
ENSSTOG00000005986	PRDM12	85	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSSTOG00000005986	PRDM12	87	99.401	ENSSSCG00000005703	PRDM12	99	95.028	Sus_scrofa
ENSSTOG00000005986	PRDM12	86	82.840	ENSTRUG00000018659	prdm12b	97	78.846	Takifugu_rubripes
ENSSTOG00000005986	PRDM12	85	81.024	ENSTRUG00000013239	-	93	81.325	Takifugu_rubripes
ENSSTOG00000005986	PRDM12	89	76.989	ENSTNIG00000005859	-	99	76.989	Tetraodon_nigroviridis
ENSSTOG00000005986	PRDM12	86	83.481	ENSTNIG00000009020	prdm12b	97	79.178	Tetraodon_nigroviridis
ENSSTOG00000005986	PRDM12	88	99.405	ENSUAMG00000009653	PRDM12	93	99.405	Ursus_americanus
ENSSTOG00000005986	PRDM12	87	99.398	ENSVVUG00000027662	PRDM12	79	99.398	Vulpes_vulpes
ENSSTOG00000005986	PRDM12	86	83.036	ENSXCOG00000002836	prdm12b	96	79.552	Xiphophorus_couchianus
ENSSTOG00000005986	PRDM12	86	82.544	ENSXMAG00000005537	prdm12b	96	79.109	Xiphophorus_maculatus
ENSSTOG00000005986	PRDM12	86	80.294	ENSXMAG00000028012	-	95	76.022	Xiphophorus_maculatus