EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSTOG00000006377 (Gene tree)
Gene ID: 101963336
Gene Symbol: POLR2J
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 4077 bases
Position: chrJH393353.1:1895828-1899904
Accession: 101963336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000005695	RNA_pol_L_2	PF13656.6	2.4e-29	1	1
ENSSTOP00000031839	RNA_pol_L_2	PF13656.6	2.7e-29	1	1
ENSSTOP00000028789	RNA_pol_L_2	PF13656.6	2e-18	1	1
ENSSTOP00000005695	RNA_pol_L	PF01193.24	2.8e-10	1	1
ENSSTOP00000031839	RNA_pol_L	PF01193.24	3e-10	1	1
ENSSTOP00000028789	RNA_pol_L	PF01193.24	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000041889	POLR2J-201	602	XM_005328503	ENSSTOP00000031839	117 (aa)	XP_005328560	A0A287DE78
ENSSTOT00000006369	POLR2J-203	336	-	ENSSTOP00000005695	112 (aa)	-	I3M7S9
ENSSTOT00000034961	POLR2J-202	264	-	ENSSTOP00000028789	87 (aa)	-	A0A287D5I9

Gene Model

Click here to download ENSSTOG00000006377's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000006377's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSTOG00000006377	POLR2J	85	33.010	ENSSTOG00000013877	POLR1D	77	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000006377	POLR2J	100	100.000	ENSG00000005075	POLR2J	100	100.000	Homo_sapiens
ENSSTOG00000006377	POLR2J	98	97.273	ENSG00000228049	POLR2J2	94	95.413	Homo_sapiens
ENSSTOG00000006377	POLR2J	100	94.872	ENSAPOG00000019538	polr2j	100	94.872	Acanthochromis_polyacanthus
ENSSTOG00000006377	POLR2J	96	100.000	ENSAMEG00000015480	-	100	92.126	Ailuropoda_melanoleuca
ENSSTOG00000006377	POLR2J	95	71.963	ENSACIG00000014549	POLR2J2	91	71.818	Amphilophus_citrinellus
ENSSTOG00000006377	POLR2J	100	94.017	ENSAOCG00000006937	polr2j	100	94.017	Amphiprion_ocellaris
ENSSTOG00000006377	POLR2J	100	94.872	ENSAPEG00000021761	polr2j	100	94.872	Amphiprion_percula
ENSSTOG00000006377	POLR2J	100	94.872	ENSATEG00000013312	-	100	94.872	Anabas_testudineus
ENSSTOG00000006377	POLR2J	100	94.872	ENSATEG00000009731	polr2j	100	94.872	Anabas_testudineus
ENSSTOG00000006377	POLR2J	86	98.020	ENSAPLG00000003744	-	100	98.020	Anas_platyrhynchos
ENSSTOG00000006377	POLR2J	100	90.598	ENSACAG00000000251	POLR2J	100	90.598	Anolis_carolinensis
ENSSTOG00000006377	POLR2J	100	94.872	ENSACLG00000014564	polr2j	100	94.872	Astatotilapia_calliptera
ENSSTOG00000006377	POLR2J	100	96.581	ENSAMXG00000007517	polr2j	100	96.581	Astyanax_mexicanus
ENSSTOG00000006377	POLR2J	65	68.493	ENSBTAG00000048046	-	61	68.493	Bos_taurus
ENSSTOG00000006377	POLR2J	94	70.476	WBGene00012187	rpb-11	89	70.000	Caenorhabditis_elegans
ENSSTOG00000006377	POLR2J	100	100.000	ENSCJAG00000016203	-	100	100.000	Callithrix_jacchus
ENSSTOG00000006377	POLR2J	100	100.000	ENSCAFG00000013683	-	100	100.000	Canis_familiaris
ENSSTOG00000006377	POLR2J	85	100.000	ENSTSYG00000029243	-	85	100.000	Carlito_syrichta
ENSSTOG00000006377	POLR2J	100	100.000	ENSCPOG00000001401	-	100	100.000	Cavia_porcellus
ENSSTOG00000006377	POLR2J	100	100.000	ENSCATG00000016595	-	100	100.000	Cercocebus_atys
ENSSTOG00000006377	POLR2J	100	100.000	ENSCLAG00000005238	-	100	100.000	Chinchilla_lanigera
ENSSTOG00000006377	POLR2J	100	100.000	ENSCSAG00000018092	-	100	100.000	Chlorocebus_sabaeus
ENSSTOG00000006377	POLR2J	100	81.197	ENSCING00000020531	-	100	81.197	Ciona_intestinalis
ENSSTOG00000006377	POLR2J	100	81.197	ENSCSAVG00000006948	-	100	81.197	Ciona_savignyi
ENSSTOG00000006377	POLR2J	100	100.000	ENSCGRG00001012814	Polr2j	100	100.000	Cricetulus_griseus_chok1gshd
ENSSTOG00000006377	POLR2J	100	84.615	ENSCGRG00000008433	Polr2j	100	84.615	Cricetulus_griseus_crigri
ENSSTOG00000006377	POLR2J	100	94.017	ENSCSEG00000020352	polr2j	100	94.017	Cynoglossus_semilaevis
ENSSTOG00000006377	POLR2J	100	94.017	ENSCVAG00000014267	polr2j	100	94.017	Cyprinodon_variegatus
ENSSTOG00000006377	POLR2J	100	95.726	ENSDARG00000035146	polr2j	100	95.726	Danio_rerio
ENSSTOG00000006377	POLR2J	100	100.000	ENSDORG00000005934	Polr2j	100	100.000	Dipodomys_ordii
ENSSTOG00000006377	POLR2J	98	78.261	FBgn0032634	Rpb11	98	78.261	Drosophila_melanogaster
ENSSTOG00000006377	POLR2J	100	86.207	ENSEBUG00000016100	polr2j	100	86.207	Eptatretus_burgeri
ENSSTOG00000006377	POLR2J	100	100.000	ENSEASG00005016864	-	100	100.000	Equus_asinus_asinus
ENSSTOG00000006377	POLR2J	100	95.726	ENSELUG00000012822	polr2j	100	95.726	Esox_lucius
ENSSTOG00000006377	POLR2J	100	100.000	ENSFCAG00000000377	-	100	100.000	Felis_catus
ENSSTOG00000006377	POLR2J	100	100.000	ENSFALG00000009523	POLR2J	100	100.000	Ficedula_albicollis
ENSSTOG00000006377	POLR2J	100	100.000	ENSFDAG00000010507	-	100	100.000	Fukomys_damarensis
ENSSTOG00000006377	POLR2J	100	94.872	ENSFHEG00000006625	polr2j	100	94.872	Fundulus_heteroclitus
ENSSTOG00000006377	POLR2J	100	94.872	ENSGMOG00000018207	polr2j	100	94.872	Gadus_morhua
ENSSTOG00000006377	POLR2J	100	100.000	ENSGALG00000030808	-	100	100.000	Gallus_gallus
ENSSTOG00000006377	POLR2J	100	94.872	ENSGAFG00000019555	polr2j	100	94.872	Gambusia_affinis
ENSSTOG00000006377	POLR2J	100	94.872	ENSGACG00000003310	polr2j	100	94.872	Gasterosteus_aculeatus
ENSSTOG00000006377	POLR2J	97	90.265	ENSGAGG00000018304	-	96	90.265	Gopherus_agassizii
ENSSTOG00000006377	POLR2J	85	95.000	ENSGGOG00000004519	-	80	95.000	Gorilla_gorilla
ENSSTOG00000006377	POLR2J	100	94.872	ENSHBUG00000008467	polr2j	100	94.872	Haplochromis_burtoni
ENSSTOG00000006377	POLR2J	100	100.000	ENSHGLG00000013598	POLR2J	100	100.000	Heterocephalus_glaber_female
ENSSTOG00000006377	POLR2J	100	100.000	ENSHGLG00100011242	POLR2J	100	100.000	Heterocephalus_glaber_male
ENSSTOG00000006377	POLR2J	100	94.872	ENSHCOG00000014827	polr2j	68	94.872	Hippocampus_comes
ENSSTOG00000006377	POLR2J	100	96.581	ENSIPUG00000023960	polr2j	100	96.581	Ictalurus_punctatus
ENSSTOG00000006377	POLR2J	100	100.000	ENSJJAG00000013854	-	100	100.000	Jaculus_jaculus
ENSSTOG00000006377	POLR2J	100	94.872	ENSJJAG00000018834	-	100	94.872	Jaculus_jaculus
ENSSTOG00000006377	POLR2J	100	94.872	ENSKMAG00000014581	polr2j	79	94.872	Kryptolebias_marmoratus
ENSSTOG00000006377	POLR2J	100	94.872	ENSLBEG00000005885	polr2j	100	94.872	Labrus_bergylta
ENSSTOG00000006377	POLR2J	100	96.581	ENSLOCG00000001885	polr2j	89	96.581	Lepisosteus_oculatus
ENSSTOG00000006377	POLR2J	100	100.000	ENSLAFG00000021507	-	100	100.000	Loxodonta_africana
ENSSTOG00000006377	POLR2J	100	100.000	ENSMMUG00000012019	POLR2J	100	100.000	Macaca_mulatta
ENSSTOG00000006377	POLR2J	100	94.872	ENSMAMG00000009374	polr2j	100	94.872	Mastacembelus_armatus
ENSSTOG00000006377	POLR2J	100	94.872	ENSMZEG00005011932	polr2j	100	94.872	Maylandia_zebra
ENSSTOG00000006377	POLR2J	100	100.000	ENSMGAG00000003534	POLR2J	100	100.000	Meleagris_gallopavo
ENSSTOG00000006377	POLR2J	100	100.000	ENSMAUG00000013049	Polr2j	100	100.000	Mesocricetus_auratus
ENSSTOG00000006377	POLR2J	87	91.753	ENSMICG00000026811	-	98	91.753	Microcebus_murinus
ENSSTOG00000006377	POLR2J	100	100.000	ENSMOCG00000001294	Polr2j	100	100.000	Microtus_ochrogaster
ENSSTOG00000006377	POLR2J	100	94.017	ENSMMOG00000013265	polr2j	100	94.017	Mola_mola
ENSSTOG00000006377	POLR2J	99	95.652	ENSMODG00000013617	-	100	91.406	Monodelphis_domestica
ENSSTOG00000006377	POLR2J	100	94.872	ENSMALG00000020749	polr2j	100	94.872	Monopterus_albus
ENSSTOG00000006377	POLR2J	100	100.000	MGP_CAROLIEiJ_G0027851	Polr2j	100	100.000	Mus_caroli
ENSSTOG00000006377	POLR2J	100	100.000	ENSMUSG00000039771	Polr2j	100	100.000	Mus_musculus
ENSSTOG00000006377	POLR2J	100	100.000	MGP_PahariEiJ_G0024434	Polr2j	100	100.000	Mus_pahari
ENSSTOG00000006377	POLR2J	100	100.000	MGP_SPRETEiJ_G0028853	Polr2j	100	100.000	Mus_spretus
ENSSTOG00000006377	POLR2J	100	100.000	ENSMLUG00000010467	POLR2J	100	100.000	Myotis_lucifugus
ENSSTOG00000006377	POLR2J	100	100.000	ENSNGAG00000023412	Polr2j	100	100.000	Nannospalax_galili
ENSSTOG00000006377	POLR2J	69	90.909	ENSNBRG00000006580	polr2j	59	90.909	Neolamprologus_brichardi
ENSSTOG00000006377	POLR2J	100	76.923	ENSODEG00000008559	-	100	76.923	Octodon_degus
ENSSTOG00000006377	POLR2J	100	100.000	ENSODEG00000015648	-	100	100.000	Octodon_degus
ENSSTOG00000006377	POLR2J	100	94.872	ENSONIG00000000259	polr2j	100	94.872	Oreochromis_niloticus
ENSSTOG00000006377	POLR2J	100	97.436	ENSOANG00000020912	POLR2J	100	97.436	Ornithorhynchus_anatinus
ENSSTOG00000006377	POLR2J	98	99.091	ENSOCUG00000023609	POLR2J	100	92.126	Oryctolagus_cuniculus
ENSSTOG00000006377	POLR2J	100	94.872	ENSORLG00000029046	polr2j	83	94.872	Oryzias_latipes
ENSSTOG00000006377	POLR2J	100	94.872	ENSORLG00020007625	polr2j	83	94.872	Oryzias_latipes_hni
ENSSTOG00000006377	POLR2J	100	94.872	ENSORLG00015003457	polr2j	83	94.872	Oryzias_latipes_hsok
ENSSTOG00000006377	POLR2J	100	94.017	ENSOMEG00000002097	polr2j	100	94.017	Oryzias_melastigma
ENSSTOG00000006377	POLR2J	98	74.775	ENSOGAG00000008250	-	100	71.875	Otolemur_garnettii
ENSSTOG00000006377	POLR2J	100	100.000	ENSOARG00000014204	-	98	100.000	Ovis_aries
ENSSTOG00000006377	POLR2J	100	100.000	ENSPPRG00000012439	-	100	100.000	Panthera_pardus
ENSSTOG00000006377	POLR2J	97	91.228	ENSPTIG00000018714	-	100	97.087	Panthera_tigris_altaica
ENSSTOG00000006377	POLR2J	85	99.000	ENSPSIG00000010173	-	100	99.000	Pelodiscus_sinensis
ENSSTOG00000006377	POLR2J	100	94.872	ENSPMGG00000021256	polr2j	100	94.872	Periophthalmus_magnuspinnatus
ENSSTOG00000006377	POLR2J	100	100.000	ENSPEMG00000015733	Polr2j	100	100.000	Peromyscus_maniculatus_bairdii
ENSSTOG00000006377	POLR2J	100	100.000	ENSPCIG00000009026	-	100	100.000	Phascolarctos_cinereus
ENSSTOG00000006377	POLR2J	100	94.872	ENSPFOG00000012001	polr2j	99	94.872	Poecilia_formosa
ENSSTOG00000006377	POLR2J	100	94.872	ENSPLAG00000014075	polr2j	100	94.872	Poecilia_latipinna
ENSSTOG00000006377	POLR2J	100	94.872	ENSPMEG00000020585	polr2j	100	94.872	Poecilia_mexicana
ENSSTOG00000006377	POLR2J	100	94.872	ENSPREG00000015255	polr2j	100	94.872	Poecilia_reticulata
ENSSTOG00000006377	POLR2J	100	100.000	ENSPCOG00000024573	-	100	100.000	Propithecus_coquereli
ENSSTOG00000006377	POLR2J	98	99.091	ENSPVAG00000017770	-	63	99.091	Pteropus_vampyrus
ENSSTOG00000006377	POLR2J	100	94.872	ENSPNYG00000014832	polr2j	100	94.872	Pundamilia_nyererei
ENSSTOG00000006377	POLR2J	100	94.017	ENSPNAG00000016595	polr2j	100	94.017	Pygocentrus_nattereri
ENSSTOG00000006377	POLR2J	100	100.000	ENSRNOG00000001430	Polr2j	100	100.000	Rattus_norvegicus
ENSSTOG00000006377	POLR2J	100	100.000	ENSSBOG00000025579	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSSTOG00000006377	POLR2J	80	98.571	ENSSHAG00000010443	-	81	100.000	Sarcophilus_harrisii
ENSSTOG00000006377	POLR2J	96	96.262	ENSSFOG00015003371	polr2j	83	94.495	Scleropages_formosus
ENSSTOG00000006377	POLR2J	100	94.872	ENSSMAG00000006729	polr2j	100	94.872	Scophthalmus_maximus
ENSSTOG00000006377	POLR2J	100	94.872	ENSSDUG00000018490	polr2j	100	94.872	Seriola_dumerili
ENSSTOG00000006377	POLR2J	100	94.872	ENSSLDG00000022354	polr2j	100	94.872	Seriola_lalandi_dorsalis
ENSSTOG00000006377	POLR2J	100	100.000	ENSSPUG00000010802	-	100	100.000	Sphenodon_punctatus
ENSSTOG00000006377	POLR2J	100	94.872	ENSSPAG00000021953	polr2j	100	94.872	Stegastes_partitus
ENSSTOG00000006377	POLR2J	100	100.000	ENSSSCG00000007688	-	100	100.000	Sus_scrofa
ENSSTOG00000006377	POLR2J	100	82.906	ENSSSCG00000003703	-	83	82.906	Sus_scrofa
ENSSTOG00000006377	POLR2J	85	99.000	ENSTGUG00000004501	-	100	99.000	Taeniopygia_guttata
ENSSTOG00000006377	POLR2J	79	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSSTOG00000006377	POLR2J	100	95.726	ENSTRUG00000020842	polr2j	100	95.726	Takifugu_rubripes
ENSSTOG00000006377	POLR2J	100	94.872	ENSTNIG00000002994	polr2j	100	94.872	Tetraodon_nigroviridis
ENSSTOG00000006377	POLR2J	99	80.180	ENSTBEG00000005797	-	73	80.180	Tupaia_belangeri
ENSSTOG00000006377	POLR2J	100	100.000	ENSUAMG00000011310	-	100	100.000	Ursus_americanus
ENSSTOG00000006377	POLR2J	100	100.000	ENSUMAG00000012594	-	100	100.000	Ursus_maritimus
ENSSTOG00000006377	POLR2J	100	98.291	ENSXETG00000001108	polr2j	100	98.291	Xenopus_tropicalis
ENSSTOG00000006377	POLR2J	100	94.872	ENSXMAG00000012422	polr2j	100	94.872	Xiphophorus_maculatus