EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSTOG00000006596 (Gene tree)
Gene ID: 101964397
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Ictidomys_tridecemlineatus
Status: putative
Strand: Minus strand
Length: 29199 bases
Position: chrJH393359.1:4135811-4165009
Accession: 101964397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSTOP00000005899	MRP-S27	PF10037.9	4.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSTOT00000006599	PTCD2-201	1838	XM_005328963	ENSSTOP00000005899	383 (aa)	XP_005329020	I3M875

Gene Model

Click here to download ENSSTOG00000006596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSTOG00000006596's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSTOG00000006596	PTCD2	99	80.628	ENSG00000049883	PTCD2	100	83.417	Homo_sapiens
ENSSTOG00000006596	PTCD2	91	46.991	ENSAPOG00000020682	ptcd2	91	46.991	Acanthochromis_polyacanthus
ENSSTOG00000006596	PTCD2	99	78.272	ENSAMEG00000007194	PTCD2	98	78.272	Ailuropoda_melanoleuca
ENSSTOG00000006596	PTCD2	90	40.286	ENSACIG00000002053	ptcd2	100	40.286	Amphilophus_citrinellus
ENSSTOG00000006596	PTCD2	91	45.845	ENSAOCG00000006616	ptcd2	89	45.845	Amphiprion_ocellaris
ENSSTOG00000006596	PTCD2	91	46.132	ENSAPEG00000022926	ptcd2	89	46.132	Amphiprion_percula
ENSSTOG00000006596	PTCD2	98	57.600	ENSACAG00000009747	PTCD2	96	57.600	Anolis_carolinensis
ENSSTOG00000006596	PTCD2	99	79.581	ENSANAG00000029353	PTCD2	98	79.581	Aotus_nancymaae
ENSSTOG00000006596	PTCD2	97	43.200	ENSACLG00000027742	ptcd2	95	43.200	Astatotilapia_calliptera
ENSSTOG00000006596	PTCD2	92	41.880	ENSAMXG00000029404	ptcd2	93	41.880	Astyanax_mexicanus
ENSSTOG00000006596	PTCD2	97	79.625	ENSBTAG00000014675	PTCD2	97	79.625	Bos_taurus
ENSSTOG00000006596	PTCD2	99	79.581	ENSCJAG00000016364	PTCD2	98	79.581	Callithrix_jacchus
ENSSTOG00000006596	PTCD2	100	76.302	ENSCAFG00000007982	PTCD2	90	76.302	Canis_familiaris
ENSSTOG00000006596	PTCD2	91	78.963	ENSCAFG00020019147	PTCD2	97	78.963	Canis_lupus_dingo
ENSSTOG00000006596	PTCD2	99	80.679	ENSCHIG00000017118	PTCD2	99	80.679	Capra_hircus
ENSSTOG00000006596	PTCD2	99	73.037	ENSCPOG00000040168	PTCD2	99	73.037	Cavia_porcellus
ENSSTOG00000006596	PTCD2	83	73.354	ENSCCAG00000021996	-	98	73.354	Cebus_capucinus
ENSSTOG00000006596	PTCD2	99	78.796	ENSCCAG00000029389	-	98	78.796	Cebus_capucinus
ENSSTOG00000006596	PTCD2	99	78.796	ENSCATG00000019069	PTCD2	99	78.796	Cercocebus_atys
ENSSTOG00000006596	PTCD2	96	77.989	ENSCLAG00000000072	PTCD2	96	77.989	Chinchilla_lanigera
ENSSTOG00000006596	PTCD2	99	79.581	ENSCSAG00000015623	PTCD2	99	79.581	Chlorocebus_sabaeus
ENSSTOG00000006596	PTCD2	90	58.453	ENSCHOG00000010634	PTCD2	100	58.453	Choloepus_hoffmanni
ENSSTOG00000006596	PTCD2	97	55.496	ENSCPBG00000000216	PTCD2	95	55.496	Chrysemys_picta_bellii
ENSSTOG00000006596	PTCD2	99	79.581	ENSCANG00000035636	PTCD2	98	79.581	Colobus_angolensis_palliatus
ENSSTOG00000006596	PTCD2	99	76.053	ENSCGRG00001015289	Ptcd2	83	76.053	Cricetulus_griseus_chok1gshd
ENSSTOG00000006596	PTCD2	99	76.053	ENSCGRG00000006193	Ptcd2	83	76.053	Cricetulus_griseus_crigri
ENSSTOG00000006596	PTCD2	91	45.272	ENSCVAG00000001285	ptcd2	89	45.272	Cyprinodon_variegatus
ENSSTOG00000006596	PTCD2	97	44.267	ENSDARG00000035391	ptcd2	97	44.267	Danio_rerio
ENSSTOG00000006596	PTCD2	99	76.963	ENSDNOG00000008719	PTCD2	99	76.963	Dasypus_novemcinctus
ENSSTOG00000006596	PTCD2	99	77.979	ENSDORG00000004921	Ptcd2	99	77.979	Dipodomys_ordii
ENSSTOG00000006596	PTCD2	99	68.407	ENSETEG00000016542	PTCD2	98	68.407	Echinops_telfairi
ENSSTOG00000006596	PTCD2	99	78.272	ENSEASG00005018038	PTCD2	99	78.272	Equus_asinus_asinus
ENSSTOG00000006596	PTCD2	99	78.796	ENSECAG00000007022	PTCD2	98	78.796	Equus_caballus
ENSSTOG00000006596	PTCD2	99	70.942	ENSEEUG00000014031	PTCD2	98	70.942	Erinaceus_europaeus
ENSSTOG00000006596	PTCD2	93	48.739	ENSELUG00000003584	ptcd2	93	48.739	Esox_lucius
ENSSTOG00000006596	PTCD2	99	73.560	ENSFCAG00000045432	PTCD2	82	73.560	Felis_catus
ENSSTOG00000006596	PTCD2	86	51.524	ENSFALG00000010299	PTCD2	99	51.524	Ficedula_albicollis
ENSSTOG00000006596	PTCD2	99	76.440	ENSFDAG00000018461	PTCD2	99	76.440	Fukomys_damarensis
ENSSTOG00000006596	PTCD2	91	49.432	ENSGMOG00000003637	ptcd2	91	49.432	Gadus_morhua
ENSSTOG00000006596	PTCD2	93	50.986	ENSGALG00000038260	PTCD2	100	49.351	Gallus_gallus
ENSSTOG00000006596	PTCD2	98	59.200	ENSGAGG00000021952	PTCD2	96	59.200	Gopherus_agassizii
ENSSTOG00000006596	PTCD2	99	80.628	ENSGGOG00000010695	PTCD2	98	80.628	Gorilla_gorilla
ENSSTOG00000006596	PTCD2	97	42.667	ENSHBUG00000009191	ptcd2	95	42.667	Haplochromis_burtoni
ENSSTOG00000006596	PTCD2	99	76.903	ENSHGLG00000001234	PTCD2	99	76.903	Heterocephalus_glaber_female
ENSSTOG00000006596	PTCD2	99	76.903	ENSHGLG00100015419	PTCD2	99	76.903	Heterocephalus_glaber_male
ENSSTOG00000006596	PTCD2	91	46.286	ENSHCOG00000001703	ptcd2	90	46.286	Hippocampus_comes
ENSSTOG00000006596	PTCD2	86	44.681	ENSIPUG00000006080	ptcd2	91	44.729	Ictalurus_punctatus
ENSSTOG00000006596	PTCD2	99	80.366	ENSJJAG00000024388	Ptcd2	99	80.366	Jaculus_jaculus
ENSSTOG00000006596	PTCD2	95	43.562	ENSKMAG00000009329	ptcd2	94	43.562	Kryptolebias_marmoratus
ENSSTOG00000006596	PTCD2	91	45.533	ENSLBEG00000024871	ptcd2	88	45.533	Labrus_bergylta
ENSSTOG00000006596	PTCD2	99	54.068	ENSLOCG00000011122	ptcd2	98	54.068	Lepisosteus_oculatus
ENSSTOG00000006596	PTCD2	80	79.221	ENSLAFG00000004115	PTCD2	99	79.221	Loxodonta_africana
ENSSTOG00000006596	PTCD2	99	79.319	ENSMFAG00000031516	PTCD2	98	79.319	Macaca_fascicularis
ENSSTOG00000006596	PTCD2	99	79.319	ENSMNEG00000007537	PTCD2	99	79.319	Macaca_nemestrina
ENSSTOG00000006596	PTCD2	99	79.058	ENSMLEG00000031093	PTCD2	98	79.058	Mandrillus_leucophaeus
ENSSTOG00000006596	PTCD2	97	47.453	ENSMAMG00000018529	ptcd2	97	47.453	Mastacembelus_armatus
ENSSTOG00000006596	PTCD2	97	43.200	ENSMZEG00005003625	ptcd2	95	43.200	Maylandia_zebra
ENSSTOG00000006596	PTCD2	91	52.722	ENSMGAG00000005033	PTCD2	100	52.722	Meleagris_gallopavo
ENSSTOG00000006596	PTCD2	99	58.005	ENSMAUG00000020253	Ptcd2	99	58.005	Mesocricetus_auratus
ENSSTOG00000006596	PTCD2	99	80.105	ENSMICG00000004535	PTCD2	98	80.105	Microcebus_murinus
ENSSTOG00000006596	PTCD2	99	74.016	ENSMOCG00000019985	Ptcd2	99	74.016	Microtus_ochrogaster
ENSSTOG00000006596	PTCD2	99	56.349	ENSMODG00000001695	PTCD2	96	56.349	Monodelphis_domestica
ENSSTOG00000006596	PTCD2	97	45.040	ENSMALG00000022372	ptcd2	97	45.040	Monopterus_albus
ENSSTOG00000006596	PTCD2	99	74.016	MGP_CAROLIEiJ_G0018829	Ptcd2	99	74.016	Mus_caroli
ENSSTOG00000006596	PTCD2	99	72.703	ENSMUSG00000021650	Ptcd2	99	72.703	Mus_musculus
ENSSTOG00000006596	PTCD2	99	75.853	MGP_PahariEiJ_G0015904	Ptcd2	99	75.853	Mus_pahari
ENSSTOG00000006596	PTCD2	99	73.228	MGP_SPRETEiJ_G0019711	Ptcd2	99	73.228	Mus_spretus
ENSSTOG00000006596	PTCD2	99	79.058	ENSMPUG00000014401	PTCD2	99	79.058	Mustela_putorius_furo
ENSSTOG00000006596	PTCD2	99	77.428	ENSMLUG00000007374	PTCD2	98	77.428	Myotis_lucifugus
ENSSTOG00000006596	PTCD2	99	75.726	ENSNGAG00000005027	Ptcd2	99	75.726	Nannospalax_galili
ENSSTOG00000006596	PTCD2	97	43.432	ENSNBRG00000008174	ptcd2	96	43.432	Neolamprologus_brichardi
ENSSTOG00000006596	PTCD2	86	44.411	ENSNBRG00000000092	-	100	44.411	Neolamprologus_brichardi
ENSSTOG00000006596	PTCD2	99	80.628	ENSNLEG00000004516	PTCD2	98	80.628	Nomascus_leucogenys
ENSSTOG00000006596	PTCD2	82	51.911	ENSMEUG00000014012	-	82	51.911	Notamacropus_eugenii
ENSSTOG00000006596	PTCD2	99	71.916	ENSOPRG00000007290	PTCD2	98	71.916	Ochotona_princeps
ENSSTOG00000006596	PTCD2	99	75.131	ENSODEG00000016417	PTCD2	99	75.131	Octodon_degus
ENSSTOG00000006596	PTCD2	80	44.984	ENSONIG00000011269	ptcd2	90	44.984	Oreochromis_niloticus
ENSSTOG00000006596	PTCD2	96	77.869	ENSOCUG00000007970	PTCD2	99	76.640	Oryctolagus_cuniculus
ENSSTOG00000006596	PTCD2	91	45.245	ENSORLG00000003851	ptcd2	88	45.245	Oryzias_latipes
ENSSTOG00000006596	PTCD2	91	45.245	ENSORLG00020009823	ptcd2	90	45.245	Oryzias_latipes_hni
ENSSTOG00000006596	PTCD2	91	44.828	ENSORLG00015016777	ptcd2	99	45.245	Oryzias_latipes_hsok
ENSSTOG00000006596	PTCD2	91	44.092	ENSOMEG00000012396	ptcd2	84	44.092	Oryzias_melastigma
ENSSTOG00000006596	PTCD2	99	74.803	ENSOGAG00000008390	PTCD2	98	74.803	Otolemur_garnettii
ENSSTOG00000006596	PTCD2	99	79.896	ENSOARG00000005087	PTCD2	98	79.896	Ovis_aries
ENSSTOG00000006596	PTCD2	99	80.366	ENSPPAG00000028480	PTCD2	98	80.366	Pan_paniscus
ENSSTOG00000006596	PTCD2	99	80.366	ENSPTRG00000016968	PTCD2	98	80.366	Pan_troglodytes
ENSSTOG00000006596	PTCD2	90	82.370	ENSPANG00000006611	PTCD2	89	82.370	Papio_anubis
ENSSTOG00000006596	PTCD2	93	48.459	ENSPKIG00000019896	ptcd2	93	48.459	Paramormyrops_kingsleyae
ENSSTOG00000006596	PTCD2	82	60.000	ENSPSIG00000014559	PTCD2	97	60.000	Pelodiscus_sinensis
ENSSTOG00000006596	PTCD2	99	75.196	ENSPEMG00000000884	Ptcd2	99	75.196	Peromyscus_maniculatus_bairdii
ENSSTOG00000006596	PTCD2	100	58.418	ENSPCIG00000029047	PTCD2	100	58.418	Phascolarctos_cinereus
ENSSTOG00000006596	PTCD2	91	44.126	ENSPLAG00000010456	ptcd2	91	44.126	Poecilia_latipinna
ENSSTOG00000006596	PTCD2	91	44.413	ENSPREG00000021797	ptcd2	88	44.413	Poecilia_reticulata
ENSSTOG00000006596	PTCD2	99	70.157	ENSPPYG00000015543	PTCD2	98	70.157	Pongo_abelii
ENSSTOG00000006596	PTCD2	80	66.124	ENSPCAG00000006806	PTCD2	98	66.124	Procavia_capensis
ENSSTOG00000006596	PTCD2	99	77.487	ENSPVAG00000010935	PTCD2	98	77.487	Pteropus_vampyrus
ENSSTOG00000006596	PTCD2	97	43.200	ENSPNYG00000003122	ptcd2	95	43.200	Pundamilia_nyererei
ENSSTOG00000006596	PTCD2	97	46.809	ENSPNAG00000021490	ptcd2	94	48.066	Pygocentrus_nattereri
ENSSTOG00000006596	PTCD2	99	75.853	ENSRNOG00000028403	Ptcd2	99	75.853	Rattus_norvegicus
ENSSTOG00000006596	PTCD2	99	73.822	ENSRBIG00000032929	PTCD2	98	73.822	Rhinopithecus_bieti
ENSSTOG00000006596	PTCD2	99	79.058	ENSRROG00000000080	PTCD2	99	79.058	Rhinopithecus_roxellana
ENSSTOG00000006596	PTCD2	99	76.702	ENSSBOG00000018911	PTCD2	99	76.702	Saimiri_boliviensis_boliviensis
ENSSTOG00000006596	PTCD2	100	58.854	ENSSHAG00000003833	PTCD2	99	58.854	Sarcophilus_harrisii
ENSSTOG00000006596	PTCD2	85	47.531	ENSSFOG00015015415	ptcd2	84	47.531	Scleropages_formosus
ENSSTOG00000006596	PTCD2	91	44.540	ENSSMAG00000010350	ptcd2	90	44.540	Scophthalmus_maximus
ENSSTOG00000006596	PTCD2	91	48.000	ENSSDUG00000008142	ptcd2	87	48.000	Seriola_dumerili
ENSSTOG00000006596	PTCD2	91	47.714	ENSSLDG00000015284	ptcd2	91	47.714	Seriola_lalandi_dorsalis
ENSSTOG00000006596	PTCD2	80	70.033	ENSSARG00000004983	PTCD2	98	70.033	Sorex_araneus
ENSSTOG00000006596	PTCD2	98	53.333	ENSSPUG00000000176	PTCD2	94	53.333	Sphenodon_punctatus
ENSSTOG00000006596	PTCD2	98	43.501	ENSSPAG00000008591	ptcd2	96	43.501	Stegastes_partitus
ENSSTOG00000006596	PTCD2	99	81.675	ENSSSCG00000016975	PTCD2	89	81.675	Sus_scrofa
ENSSTOG00000006596	PTCD2	90	52.023	ENSTGUG00000005705	PTCD2	99	52.023	Taeniopygia_guttata
ENSSTOG00000006596	PTCD2	99	75.526	ENSTBEG00000016559	PTCD2	98	75.526	Tupaia_belangeri
ENSSTOG00000006596	PTCD2	99	79.896	ENSTTRG00000011851	PTCD2	98	79.896	Tursiops_truncatus
ENSSTOG00000006596	PTCD2	99	78.010	ENSUAMG00000007583	PTCD2	89	78.010	Ursus_americanus
ENSSTOG00000006596	PTCD2	99	77.749	ENSUMAG00000007666	PTCD2	99	77.749	Ursus_maritimus
ENSSTOG00000006596	PTCD2	99	79.373	ENSVPAG00000009597	PTCD2	98	79.373	Vicugna_pacos
ENSSTOG00000006596	PTCD2	99	76.178	ENSVVUG00000007299	-	99	76.178	Vulpes_vulpes
ENSSTOG00000006596	PTCD2	92	54.830	ENSXETG00000031652	PTCD2	92	54.830	Xenopus_tropicalis
ENSSTOG00000006596	PTCD2	91	43.553	ENSXMAG00000005940	ptcd2	82	43.553	Xiphophorus_maculatus